Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 5.8e-107 391.0 206 100.0
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 2.9e-98 362.1 212 91.5
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 7.1e-81 304.3 219 81.3
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 2.6e-75 285.8 211 78.7
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 5.7e-70 268.1 213 74.6
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 8.5e-66 254.2 216 73.6
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 2.8e-61 239.2 221 68.8
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 1.4e-55 220.3 216 64.4
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 1.4e-55 220.3 216 64.4
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 2.6e-54 216.1 216 64.4
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 4.4e-54 215.3 216 64.4
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 4.4e-54 215.3 217 64.5
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 1.1e-52 210.7 218 62.4
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 8.0e-48 194.5 225 57.8
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 2.7e-43 179.5 216 55.1
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 1.1e-41 174.1 214 54.2
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 2.6e-38 162.9 219 52.5
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 2.8e-37 159.5 211 50.7
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 4.1e-36 155.6 217 50.7
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 1.7e-34 150.2 211 50.2
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 5.0e-34 148.7 221 48.0
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 1.1e-33 147.5 217 47.5
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 1.9e-33 146.7 214 48.6
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 3.3e-33 146.0 222 46.8
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 4.2e-33 145.6 183 57.9
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 1.2e-32 144.1 221 51.6
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 1.2e-32 144.1 221 51.6
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 6.1e-32 141.7 221 48.0
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 1.0e-31 141.0 216 48.1
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 1.8e-31 140.2 214 47.2
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 1.8e-31 140.2 221 47.1
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 3.0e-31 139.4 223 47.5
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 5.2e-31 138.7 219 46.6
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 8.9e-31 137.9 216 45.8
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 1.5e-30 137.1 227 46.3
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 7.5e-30 134.8 214 45.3
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 1.3e-29 134.0 219 45.7
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.3e-29 134.0 228 46.5
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 1.3e-29 134.0 228 46.5
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 1.3e-29 134.0 204 46.6
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 3.7e-29 132.5 228 46.1
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 3.7e-29 132.5 217 44.7
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 6.3e-29 131.7 214 46.3
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 8.3e-29 131.3 221 48.4
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 1.1e-28 131.0 219 45.2
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 1.8e-28 130.2 196 49.5
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 1.8e-28 130.2 215 45.1
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 2.4e-28 129.8 216 46.8
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 3.1e-28 129.4 220 46.4
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 5.4e-28 128.6 213 43.7
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 5.4e-28 128.6 208 45.7
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 7.0e-28 128.3 214 44.4
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 9.2e-28 127.9 217 46.5
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 9.2e-28 127.9 216 46.8
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 2.0e-27 126.7 221 48.0
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 3.5e-27 125.9 196 48.0
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 4.5e-27 125.6 221 46.6
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 4.5e-27 125.6 212 43.9
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 5.9e-27 125.2 216 45.4
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 5.9e-27 125.2 223 45.7
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 5.9e-27 125.2 220 43.6
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 1.3e-26 124.0 206 48.5
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 1.7e-26 123.6 222 43.7
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 1.7e-26 123.6 212 47.6
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 2.9e-26 122.9 226 45.1
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 3.8e-26 122.5 216 44.9
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 3.8e-26 122.5 217 42.4
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 5.0e-26 122.1 219 46.6
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 8.6e-26 121.3 219 46.1
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 8.6e-26 121.3 226 44.7
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 3.3e-25 119.4 217 44.2
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 4.3e-25 119.0 218 43.6
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 5.6e-25 118.6 196 44.9
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 5.6e-25 118.6 207 45.4
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 9.5e-25 117.9 198 47.0
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 1.2e-24 117.5 214 42.1
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 1.6e-24 117.1 214 43.9
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 1.0e-23 114.4 189 48.1
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 1.4e-23 114.0 209 40.2
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 1.8e-23 113.6 219 45.7
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 1.8e-23 113.6 207 43.5
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 2.3e-23 113.2 217 41.9
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 3.0e-23 112.8 224 44.2
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 4.0e-23 112.5 209 44.0
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 6.8e-23 111.7 221 42.5
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 1.2e-22 110.9 229 42.4
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 1.2e-22 110.9 215 43.3
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 1.5e-22 110.5 229 41.0
BcaC03g13663 Brassica carinata HOM05D005571 ORTHO05D006919 3.4e-22 109.4 141 53.9
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus HOM05D005571 ORTHO05D006919 3.4e-22 109.4 141 53.9
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 5.8e-22 108.6 197 41.6
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 7.5e-22 108.2 194 44.8
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 9.8e-22 107.8 225 41.3
A02p05480 Brassica napus HOM05D005571 ORTHO05D006919 9.8e-22 107.8 141 55.3
BraA02t05499Z Brassica rapa HOM05D005571 ORTHO05D006919 9.8e-22 107.8 141 55.3
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 2.2e-21 106.7 204 38.7
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 2.2e-21 106.7 195 43.6
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 6.4e-21 105.1 197 44.7
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 1.1e-20 104.4 197 41.6
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 1.1e-20 104.4 231 39.4
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 1.8e-20 103.6 221 41.2
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 2.4e-20 103.2 201 39.8
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 4.1e-20 102.4 218 41.3
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 1.2e-19 100.9 230 41.3
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 2.7e-19 99.8 210 40.5
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 6.0e-19 98.6 246 39.0
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 7.8e-19 98.2 210 39.5
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 1.3e-18 97.4 213 37.6
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 1.7e-18 97.1 156 48.7
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 2.3e-18 96.7 201 42.3
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 5.0e-18 95.5 178 42.7
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 8.6e-18 94.7 182 40.7
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 8.6e-18 94.7 182 40.7
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 8.6e-18 94.7 217 41.5
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 1.9e-17 93.6 210 37.6
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.5e-17 93.2 208 38.0
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 5.6e-17 92.0 207 38.6
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 5.6e-17 92.0 131 51.1
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 2.8e-16 89.7 210 36.7
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 4.0e-15 85.9 208 39.4
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 1.3e-13 80.9 220 37.3
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 3.2e-12 76.3 184 32.6
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 2.7e-11 73.2 213 35.7
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 1.3e-10 70.9 195 37.4
CDE05G1909 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 1.9e-09 67.0 177 35.6
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 3.3e-09 66.2 83 54.2
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 1.6e-08 63.9 151 37.7
CDE04G0695 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 8.9e-07 58.2 144 36.8
ECA238G3056 Erigeron canadensis HOM05D002204 ORTHO05D002875 7.5e-06 55.1 61 50.8
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 9.9e-06 54.7 113 44.2


User provided reference genes

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