Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 9.7e-124 446.8 225 100.0
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 5.4e-114 414.5 230 91.3
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 2.0e-108 396.0 227 87.2
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 1.0e-101 373.6 230 80.4
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 1.7e-99 366.3 214 86.4
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 7.8e-97 357.5 230 79.1
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 1.3e-96 356.7 230 78.3
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 1.3e-96 356.7 230 78.3
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 2.9e-96 355.5 228 78.5
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 1.1e-95 353.6 228 78.1
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 5.6e-95 351.3 230 77.4
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 2.4e-90 335.9 217 74.7
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 9.2e-90 334.0 215 76.7
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 1.6e-89 333.2 224 73.2
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 3.1e-85 318.9 223 70.4
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 2.0e-84 316.2 221 68.8
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 4.4e-84 315.1 218 69.7
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 2.9e-83 312.4 204 73.5
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 4.9e-83 311.6 224 68.8
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 1.9e-82 309.7 204 71.6
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 2.4e-82 309.3 223 66.8
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 3.2e-82 308.9 219 68.9
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 3.2e-82 308.9 217 67.7
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 4.1e-82 308.5 202 70.8
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 9.2e-82 307.4 201 72.1
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 9.2e-82 307.4 205 71.7
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 1.2e-81 307.0 206 70.4
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 3.5e-81 305.4 224 65.6
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 3.5e-81 305.4 217 67.3
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 6.0e-81 304.7 202 70.3
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 6.0e-81 304.7 219 67.1
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 2.3e-80 302.8 201 69.7
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 2.3e-80 302.8 202 69.3
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 3.0e-80 302.4 224 66.1
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 3.9e-80 302.0 208 71.2
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 6.6e-80 301.2 201 69.7
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 1.1e-79 300.4 202 69.3
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 1.5e-79 300.1 224 63.4
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 1.9e-79 299.7 212 70.8
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 2.5e-79 299.3 224 64.7
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 2.5e-79 299.3 228 67.1
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 4.3e-79 298.5 200 70.5
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 4.3e-79 298.5 229 64.6
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 7.3e-79 297.7 227 64.3
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 7.3e-79 297.7 205 68.3
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 1.2e-78 297.0 224 64.3
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 1.2e-78 297.0 203 69.0
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 2.8e-78 295.8 222 64.0
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 2.8e-78 295.8 202 71.3
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 2.8e-78 295.8 204 71.6
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 2.8e-78 295.8 204 68.1
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 8.1e-78 294.3 227 65.6
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 8.1e-78 294.3 198 67.7
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 1.1e-77 293.9 205 66.3
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 1.1e-77 293.9 204 67.2
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 2.3e-77 292.7 201 70.1
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 1.2e-76 290.4 211 67.3
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 1.5e-76 290.0 227 63.0
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 2.0e-76 289.7 202 67.3
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 2.6e-76 289.3 240 61.2
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 7.6e-76 287.7 231 59.7
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 7.6e-76 287.7 200 68.5
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 9.9e-76 287.3 238 61.3
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 2.9e-75 285.8 206 64.6
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 2.9e-75 285.8 202 66.3
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 4.9e-75 285.0 191 69.6
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 8.4e-75 284.3 202 66.3
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 1.4e-74 283.5 237 62.4
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 1.4e-74 283.5 214 65.0
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 2.1e-73 279.6 199 68.8
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 2.1e-73 279.6 225 60.4
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 3.5e-73 278.9 251 58.6
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 6.0e-73 278.1 233 57.1
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.0e-72 277.3 224 59.4
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 1.0e-72 277.3 228 58.8
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 1.7e-72 276.6 199 64.8
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 6.6e-72 274.6 202 64.4
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.5e-71 273.5 223 61.9
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 1.9e-71 273.1 199 64.3
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 2.5e-71 272.7 220 61.8
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 4.3e-71 271.9 202 62.4
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 7.3e-71 271.2 238 58.4
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 4.7e-70 268.5 234 56.8
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 4.7e-70 268.5 206 62.1
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 4.0e-69 265.4 297 48.8
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 8.9e-69 264.2 234 57.3
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 3.4e-68 262.3 202 60.9
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 4.4e-68 261.9 200 61.5
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 4.4e-68 261.9 202 60.4
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 4.4e-68 261.9 180 69.4
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.9e-66 256.5 206 62.1
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 1.9e-66 256.5 216 61.1
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 1.7e-64 250.0 176 69.3
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 2.3e-64 249.6 181 66.3
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 6.6e-64 248.1 239 52.7
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 1.8e-61 240.0 219 54.3
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 1.2e-60 237.3 183 63.4
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 2.1e-57 226.5 159 68.6
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 2.1e-54 216.5 158 67.1
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 2.4e-53 213.0 155 65.2
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 1.2e-52 210.7 206 47.1
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 5.3e-45 185.3 132 66.7
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 2.0e-44 183.3 134 62.7
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 6.5e-43 178.3 187 52.4
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 2.7e-41 172.9 111 73.0
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 1.1e-39 167.5 109 70.6
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 3.4e-36 156.0 114 66.7
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 2.2e-35 153.3 115 65.2
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 8.4e-35 151.4 100 71.0
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 4.2e-34 149.1 87 75.9
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 3.7e-30 136.0 85 77.6
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 6.5e-27 125.2 91 65.9
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.4e-26 124.0 90 66.7
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 3.0e-24 116.3 88 60.2
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 5.1e-24 115.5 92 63.0
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 1.1e-23 114.4 84 67.9
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 1.1e-21 107.8 118 51.7
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 5.9e-20 102.1 80 61.2
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 7.7e-20 101.7 87 57.5
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 2.2e-19 100.1 70 64.3
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 2.1e-17 93.6 66 63.6
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 2.2e-14 83.6 72 58.3
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 1.1e-13 81.3 68 57.4
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 1.1e-07 61.2 47 61.7


User provided reference genes

Program Settings