Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G41720 Arabidopsis thaliana HOM05D003814 ORTHO05D004399 4.8e-108 394.4 188 100.0
AL7G47620 Arabidopsis lyrata HOM05D003814 ORTHO05D004399 3.3e-93 345.1 188 87.2
Carub.0007s3374 Capsella rubella HOM05D003814 ORTHO05D004399 4.7e-63 245.0 180 69.4
CARHR272950 Cardamine hirsuta HOM05D003814 ORTHO05D004399 5.4e-59 231.5 163 69.3
Carub.0007s3375 Capsella rubella HOM05D003814 ORTHO05D004399 1.5e-56 223.4 192 60.9
A04p14880 Brassica napus HOM05D003814 ORTHO05D004399 8.9e-54 214.2 187 60.4
BraA04t17126Z Brassica rapa HOM05D003814 ORTHO05D004399 8.9e-54 214.2 187 60.4
Thhalv10028265m.g Eutrema salsugineum HOM05D003814 ORTHO05D004399 2.2e-52 209.5 193 58.0
Sp1g34780 Schrenkiella parvula HOM05D003814 ORTHO05D004399 2.3e-49 199.5 183 57.9
Thhalv10028201m.g Eutrema salsugineum HOM05D003814 ORTHO05D004399 8.6e-49 197.6 166 62.0
Sp1g34730 Schrenkiella parvula HOM05D003814 ORTHO05D004399 1.8e-46 189.9 169 58.0
Sp1g34880 Schrenkiella parvula HOM05D003814 ORTHO05D004399 1.9e-43 179.9 172 57.0
Thhalv10029417m.g Eutrema salsugineum HOM05D003814 ORTHO05D004399 2.5e-40 169.5 169 52.7
BraA09t37130Z Brassica rapa HOM05D003814 ORTHO05D004399 8.1e-39 164.5 169 53.3
A09p14840 Brassica napus HOM05D003814 ORTHO05D004399 1.8e-38 163.3 167 52.7
BcaB07g31449 Brassica carinata HOM05D003814 ORTHO05D004399 4.0e-38 162.2 167 52.1
BcaC04g22552 Brassica carinata HOM05D003814 ORTHO05D004399 4.0e-38 162.2 169 52.7
BolC9t54693H Brassica oleracea HOM05D003814 ORTHO05D004399 4.0e-38 162.2 169 52.7
C09p17970 Brassica napus HOM05D003814 ORTHO05D004399 3.4e-37 159.1 169 53.3
AL2G10680 Arabidopsis lyrata HOM05D003814 ORTHO05D004399 1.7e-36 156.8 164 51.2
Aa31LG2G1300 Aethionema arabicum HOM05D003814 ORTHO05D004399 8.3e-36 154.5 186 46.2
BcaB07g31514 Brassica carinata HOM05D003814 ORTHO05D004399 1.7e-33 146.7 161 48.4
AT1G64290 Arabidopsis thaliana HOM05D003814 ORTHO05D004399 2.3e-33 146.4 185 43.8
CARHR290110 Cardamine hirsuta HOM05D003814 ORTHO05D004399 2.3e-33 146.4 163 51.5
Thhalv10023822m.g Eutrema salsugineum HOM05D003814 ORTHO05D004399 8.6e-33 144.4 166 46.4
AL2G10650 Arabidopsis lyrata HOM05D003814 ORTHO05D004399 1.1e-32 144.1 166 47.0
AT1G64295 Arabidopsis thaliana HOM05D003814 ORTHO05D004399 3.3e-32 142.5 166 45.8
A09p14250 Brassica napus HOM05D002195 ORTHO05D002898 1.2e-31 140.6 176 46.6
Carub.0002s0052 Capsella rubella HOM05D003814 ORTHO05D004399 1.4e-30 137.1 166 44.6
Carub.0007s3376 Capsella rubella HOM05D003814 ORTHO05D004399 1.4e-30 137.1 186 44.1
Carub.0002s0053 Capsella rubella HOM05D003814 ORTHO05D004399 1.8e-30 136.7 161 43.5
BraA09t37073Z Brassica rapa HOM05D003814 ORTHO05D004399 3.1e-30 136.0 169 47.3
CARHR050300 Cardamine hirsuta HOM05D003814 ORTHO05D004399 2.0e-29 133.3 167 44.9
Sp7g03960 Schrenkiella parvula HOM05D003814 ORTHO05D004399 3.4e-29 132.5 168 45.8
C09p17160 Brassica napus HOM05D002195 ORTHO05D002898 5.8e-29 131.7 153 46.4
BolC9t54614H Brassica oleracea HOM05D002195 ORTHO05D002898 5.8e-29 131.7 153 46.4
BcaC04g22634 Brassica carinata HOM05D003814 ORTHO05D004399 2.9e-28 129.4 146 47.3
SpUn1086_0010 Schrenkiella parvula HOM05D003814 ORTHO05D004399 7.1e-27 124.8 100 62.0
AT2G05360 Arabidopsis thaliana HOM05D003814 ORTHO05D004399 1.3e-25 120.6 160 43.1
A02p10510 Brassica napus HOM05D003814 ORTHO05D004399 3.9e-25 119.0 168 42.3
Potri.010G224400 Populus trichocarpa HOM05D003814 ORTHO05D004399 1.5e-24 117.1 163 41.1
TWI53G0525 Tripterygium wilfordii HOM05D003814 ORTHO05D004399 2.5e-24 116.3 169 42.0
Potri.008G038000 Populus trichocarpa HOM05D003814 ORTHO05D004399 5.6e-24 115.2 173 41.6
Cfa001318 Carpinus fangiana HOM05D003814 ORTHO05D004399 1.5e-21 107.1 179 39.1
Thecc.09G080800 Theobroma cacao HOM05D003814 ORTHO05D004399 1.5e-21 107.1 164 37.8
QL05p073999 Quercus lobata HOM05D003814 ORTHO05D004399 5.8e-21 105.1 161 40.4
Ciclev10007128m.g Citrus clementina HOM05D003814 ORTHO05D004399 1.3e-20 104.0 167 36.5
FAN26G3081 Fragaria x ananassa HOM05D003814 ORTHO05D004399 1.3e-20 104.0 189 37.6
Haze_11118 Corylus avellana HOM05D003814 ORTHO05D004399 2.9e-20 102.8 167 39.5
Haze_08071 Corylus avellana HOM05D003814 ORTHO05D004399 1.1e-19 100.9 167 38.9
RcHm_v2.0_Chr2g0094241 Rosa chinensis HOM05D003814 ORTHO05D004399 1.9e-19 100.1 192 33.9
CiPaw.01G298600 Carya illinoinensis HOM05D003814 ORTHO05D004399 3.2e-19 99.4 172 37.2
FAN28G0704 Fragaria x ananassa HOM05D003814 ORTHO05D004399 3.2e-19 99.4 178 35.4
CiPaw.04G145600 Carya illinoinensis HOM05D003814 ORTHO05D004399 1.6e-18 97.1 175 34.3
Haze_11119 Corylus avellana HOM05D003814 ORTHO05D004399 2.1e-18 96.7 167 37.7
Duzib168G0557 Durio zibethinus HOM05D003814 ORTHO05D004399 2.1e-18 96.7 160 34.4
Dinv25578 Davidia involucrata HOM05D003814 ORTHO05D004399 3.5e-18 95.9 171 34.5
Gohir.D04G023700 Gossypium hirsutum HOM05D003814 ORTHO05D004399 6.0e-18 95.1 168 32.7
Duzib187G0024 Durio zibethinus HOM05D003814 ORTHO05D004399 1.0e-17 94.4 161 36.0
Gohir.D04G024036 Gossypium hirsutum HOM05D003814 ORTHO05D004399 1.0e-17 94.4 160 33.8
FAN23G1165 Fragaria x ananassa HOM05D003814 ORTHO05D004399 1.3e-17 94.0 178 36.0
Gohir.D04G029200 Gossypium hirsutum HOM05D003814 ORTHO05D004399 1.3e-17 94.0 161 32.3
Prupe.7G202800 Prunus persica HOM05D003814 ORTHO05D004399 1.3e-17 94.0 142 35.9
PGR004G0767 Punica granatum HOM05D003814 ORTHO05D004399 1.3e-17 94.0 163 37.4
Gorai.012G033100 Gossypium raimondii HOM05D003814 ORTHO05D004399 6.6e-17 91.7 160 33.1
C02p17570 Brassica napus HOM05D003814 ORTHO05D004399 8.7e-17 91.3 139 41.7
Potri.001G462650 Populus trichocarpa HOM05D003814 ORTHO05D004399 1.1e-16 90.9 145 40.7
MD15G1214200 Malus domestica HOM05D003814 ORTHO05D004399 1.5e-16 90.5 149 36.2
Peaxi162Scf00928g00024 Petunia axillaris HOM05D003814 ORTHO05D004399 1.9e-16 90.1 175 32.0
C04p48950 Brassica napus HOM05D003814 ORTHO05D004399 7.3e-16 88.2 88 54.5
BolC4t26476H Brassica oleracea HOM05D003814 ORTHO05D004399 7.3e-16 88.2 88 54.5
COL.COLO4_18129 Corchorus olitorius HOM05D003814 ORTHO05D004399 7.3e-16 88.2 151 36.4
Gohir.A07G014200 Gossypium hirsutum HOM05D003814 ORTHO05D004399 7.3e-16 88.2 168 33.9
Potri.014G187100 Populus trichocarpa HOM05D003814 ORTHO05D004399 9.6e-16 87.8 191 34.0
Sabra10G0173600 Salix brachista HOM05D001546 ORTHO05D004399 9.6e-16 87.8 100 49.0
DCAR_028786 Daucus carota HOM05D003814 ORTHO05D004399 2.8e-15 86.3 167 32.9
FvH4_1g08170 Fragaria vesca HOM05D003814 ORTHO05D004399 2.8e-15 86.3 176 35.2
FAN19G0873 Fragaria x ananassa HOM05D003814 ORTHO05D004399 2.8e-15 86.3 176 35.2
FAN26G2103 Fragaria x ananassa HOM05D003814 ORTHO05D004399 3.6e-15 85.9 180 33.9
FAN26G3410 Fragaria x ananassa HOM05D003814 ORTHO05D004399 3.6e-15 85.9 180 33.9
FAN28G0169 Fragaria x ananassa HOM05D003814 ORTHO05D004399 3.6e-15 85.9 180 33.9
TAR178G0001 Trochodendron aralioides HOM05D003814 ORTHO05D004399 3.6e-15 85.9 165 34.5
TAR624G1373 Trochodendron aralioides HOM05D003814 ORTHO05D004399 3.6e-15 85.9 165 34.5
FAN23G2856 Fragaria x ananassa HOM05D003814 ORTHO05D004399 4.8e-15 85.5 171 34.5
Gohir.A05G386550 Gossypium hirsutum HOM05D003814 ORTHO05D004399 4.8e-15 85.5 147 34.0
Nitab4.5_0000073g0260 Nicotiana tabacum HOM05D003814 ORTHO05D004399 4.8e-15 85.5 174 30.5
Potri.007G037500 Populus trichocarpa HOM05D003814 ORTHO05D004399 4.8e-15 85.5 158 36.1
Gohir.D07G013832 Gossypium hirsutum HOM05D003814 ORTHO05D004399 8.1e-15 84.7 168 33.9
Gohir.A07G014250 Gossypium hirsutum HOM05D003814 ORTHO05D004399 1.1e-14 84.3 168 33.9
Potri.006G167500 Populus trichocarpa HOM05D003814 ORTHO05D004399 2.4e-14 83.2 180 33.3
BcaB06g27653 Brassica carinata HOM05D003814 ORTHO05D004399 3.1e-14 82.8 82 51.2
Cc08_g07160 Coffea canephora HOM05D003814 ORTHO05D004399 3.1e-14 82.8 185 32.4
Potri.008G214000 Populus trichocarpa HOM05D003814 ORTHO05D004399 3.1e-14 82.8 180 32.2
Potri.017G066400 Populus trichocarpa HOM05D003814 ORTHO05D004399 4.0e-14 82.4 180 33.9
Gorai.001G014600 Gossypium raimondii HOM05D003814 ORTHO05D004399 5.3e-14 82.0 168 32.7
Haze_11116 Corylus avellana HOM05D003054 ORTHO05D003376 1.5e-13 80.5 145 33.8
Zm00001eb202740 Zea mays HOM05D003814 ORTHO05D004399 1.5e-13 80.5 163 32.5
Lsat_1_v5_gn_6_92600 Lactuca sativa HOM05D003814 ORTHO05D004399 2.0e-13 80.1 183 31.7
QL03p008482 Quercus lobata HOM05D003814 ORTHO05D004399 2.0e-13 80.1 98 39.8
Sabra16G0039400 Salix brachista HOM05D003814 ORTHO05D004399 2.0e-13 80.1 98 48.0
SHI03051 Sapria himalayana HOM05D003814 ORTHO05D004399 2.0e-13 80.1 157 37.6
SHI03045 Sapria himalayana HOM05D003814 ORTHO05D004399 2.6e-13 79.7 157 37.6
FAN26G2210 Fragaria x ananassa HOM05D003814 ORTHO05D004399 3.4e-13 79.3 84 44.0
TAR626G0622 Trochodendron aralioides HOM05D003814 ORTHO05D004399 1.3e-12 77.4 175 33.1
HanXRQChr04g0126191 Helianthus annuus HOM05D003814 ORTHO05D004399 1.7e-12 77.0 166 31.3
Manes.04G143500 Manihot esculenta HOM05D003814 ORTHO05D004399 1.7e-12 77.0 174 30.5
Hma1.2p1_0169F.1_g074710 Hydrangea macrophylla HOM05D003814 ORTHO05D004399 4.9e-12 75.5 165 31.5
TAR374G0716 Trochodendron aralioides HOM05D003814 ORTHO05D004399 6.4e-12 75.1 176 33.0
PGR004G1882 Punica granatum HOM05D003814 ORTHO05D004399 1.4e-11 73.9 162 32.7
FvH4_1g08161 Fragaria vesca HOM05D003814 ORTHO05D004399 2.4e-11 73.2 81 43.2
TAR636G0432 Trochodendron aralioides HOM05D003814 ORTHO05D004399 2.4e-11 73.2 184 31.5
HanXRQChr04g0107941 Helianthus annuus HOM05D003814 ORTHO05D004399 5.4e-11 72.0 165 29.1
Gohir.D03G018133 Gossypium hirsutum HOM05D003814 ORTHO05D004399 1.6e-10 70.5 162 29.0
Gorai.003G018500 Gossypium raimondii HOM05D003814 ORTHO05D004399 1.6e-10 70.5 162 29.0
MD15G1214100 Malus domestica HOM05D003814 ORTHO05D004399 1.6e-10 70.5 156 30.8
Thecc.06G118300 Theobroma cacao HOM05D003814 ORTHO05D004399 1.6e-10 70.5 162 29.0
TAR636G1188 Trochodendron aralioides HOM05D003814 ORTHO05D004399 3.5e-10 69.3 93 43.0
HanXRQChr11g0341161 Helianthus annuus HOM05D003814 ORTHO05D004399 4.6e-10 68.9 167 29.9
PSO478G4598 Papaver somniferum HOM05D003814 ORTHO05D004399 4.6e-10 68.9 162 33.3
Prupe.7G202900 Prunus persica HOM05D003814 ORTHO05D004399 7.9e-10 68.2 153 32.0
ClCG10G017950 Citrullus lanatus HOM05D003814 ORTHO05D004399 1.0e-09 67.8 161 34.2
CAN.G625.43 Capsicum annuum HOM05D003814 ORTHO05D004399 1.3e-09 67.4 179 27.4
Nitab4.5_0000343g0080 Nicotiana tabacum HOM05D003814 ORTHO05D004399 1.3e-09 67.4 76 46.1
ClCG10G017770 Citrullus lanatus HOM05D003814 ORTHO05D004399 3.0e-09 66.2 163 34.4
Gohir.A02G162300 Gossypium hirsutum HOM05D003814 ORTHO05D004399 3.0e-09 66.2 162 28.4
PSO017G6459 Papaver somniferum HOM05D003814 ORTHO05D004399 3.0e-09 66.2 162 33.3
PSO170G5919 Papaver somniferum HOM05D003814 ORTHO05D004399 3.0e-09 66.2 137 28.5
Sed0024854 Sechium edule HOM05D003814 ORTHO05D004399 3.0e-09 66.2 161 31.1
Migut.E01439 Erythranthe guttata HOM05D003814 ORTHO05D004399 6.7e-09 65.1 174 31.0
PGSC0003DMG400035508 Solanum tuberosum HOM05D003814 ORTHO05D004399 8.7e-09 64.7 73 39.7
unitig_22.g5418 Utricularia gibba HOM05D003814 ORTHO05D004399 1.5e-08 63.9 175 28.6
MD02G1086300 Malus domestica HOM05D003814 ORTHO05D004399 1.9e-08 63.5 191 31.9
Peaxi162Scf00047g10141 Petunia axillaris HOM05D003814 ORTHO05D004399 1.9e-08 63.5 73 45.2
Rhsim04G0064500 Rhododendron simsii HOM05D000664 ORTHO05D000491 3.3e-08 62.8 166 28.9
SalBow1G2869 Salvia bowleyana HOM05D001856 ORTHO05D001959 4.3e-08 62.4 175 28.6
MELO3C009576.2 Cucumis melo HOM05D003814 ORTHO05D004399 5.6e-08 62.0 162 31.5
PGSC0003DMG400037022 Solanum tuberosum HOM05D003814 ORTHO05D004399 5.6e-08 62.0 72 38.9
TAR624G1176 Trochodendron aralioides HOM05D003814 ORTHO05D004399 7.4e-08 61.6 48 56.2
Peaxi162Scf00067g00233 Petunia axillaris HOM05D003814 ORTHO05D004399 9.6e-08 61.2 70 47.1
PSO170G6690 Papaver somniferum HOM05D003814 ORTHO05D004399 1.3e-07 60.8 184 29.3
Lsat_1_v5_gn_8_86340 Lactuca sativa HOM05D003814 ORTHO05D004399 1.6e-07 60.5 160 30.0
Lsat_1_v5_gn_1_71940 Lactuca sativa HOM05D003814 ORTHO05D004399 2.1e-07 60.1 166 26.5
PGSC0003DMG400046351 Solanum tuberosum HOM05D003814 ORTHO05D004399 2.1e-07 60.1 65 44.6
PSO478G3480 Papaver somniferum HOM05D003814 ORTHO05D004399 2.8e-07 59.7 86 38.4
PGSC0003DMG400041501 Solanum tuberosum HOM05D003814 ORTHO05D004399 3.7e-07 59.3 174 26.4
HanXRQChr04g0126041 Helianthus annuus HOM05D003814 ORTHO05D004399 4.8e-07 58.9 166 27.1
ECA236G1426 Erigeron canadensis HOM05D000214 ORTHO05D000131 6.2e-07 58.5 44 56.8
PSO782G3287 Papaver somniferum HOM05D003814 ORTHO05D004399 3.1e-06 56.2 86 38.4
PSO832G2394 Papaver somniferum HOM05D003814 ORTHO05D004399 4.0e-06 55.8 127 30.7
Aqoxy5G02065 Aquilegia oxysepala HOM05D003814 ORTHO05D004399 5.3e-06 55.5 160 29.4
unitig_22.g5424 Utricularia gibba HOM05D003814 ORTHO05D004399 9.0e-06 54.7 46 50.0


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