Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G41270 Arabidopsis thaliana HOM05D004296 ORTHO05D005045 9.1e-134 480.3 259 100.0
AL7G48180 Arabidopsis lyrata HOM05D004296 ORTHO05D005045 3.1e-105 385.6 239 87.0
Carub.0007s3425 Capsella rubella HOM05D004296 ORTHO05D005045 8.6e-100 367.5 261 78.5
Thhalv10028247m.g Eutrema salsugineum HOM05D004296 ORTHO05D005045 2.4e-86 322.8 260 70.4
Thhalv10027895m.g Eutrema salsugineum HOM05D004296 ORTHO05D005045 4.3e-83 312.0 260 74.6
C04p48320 Brassica napus HOM05D004296 ORTHO05D005045 4.0e-81 305.4 270 68.1
BcaC02g08973 Brassica carinata HOM05D004296 ORTHO05D005045 2.0e-80 303.1 271 67.5
BolC4t26425H Brassica oleracea HOM05D004296 ORTHO05D005045 2.0e-80 303.1 271 67.5
Carub.0001s0729 Capsella rubella HOM05D004296 ORTHO05D005045 1.4e-78 297.0 262 67.2
CARHR213060 Cardamine hirsuta HOM05D004296 ORTHO05D005045 1.2e-77 293.9 265 66.8
Sp7g00660 Schrenkiella parvula HOM05D004296 ORTHO05D005045 1.1e-73 280.8 268 67.2
SpUn0010_0140 Schrenkiella parvula HOM05D004296 ORTHO05D005045 1.1e-73 280.8 268 67.2
BcaB06g27609 Brassica carinata HOM05D004296 ORTHO05D005045 3.8e-71 272.3 270 61.5
BraA04t17088Z Brassica rapa HOM05D004296 ORTHO05D005045 3.3e-67 259.2 232 67.2
A04p14410 Brassica napus HOM05D004296 ORTHO05D005045 4.8e-66 255.4 233 66.1
Aa31LG9G640 Aethionema arabicum HOM05D004296 ORTHO05D005045 2.4e-57 226.5 266 53.0
THA.LOC104809392 Tarenaya hassleriana HOM05D004296 ORTHO05D005045 1.4e-54 217.2 274 51.5
Duzib068G1191 Durio zibethinus HOM05D004296 ORTHO05D005045 9.7e-43 177.9 264 43.6
Gohir.D05G298900 Gossypium hirsutum HOM05D004296 ORTHO05D005045 3.7e-42 176.0 251 43.0
Gohir.A05G299133 Gossypium hirsutum HOM05D004296 ORTHO05D005045 1.1e-41 174.5 251 42.6
Gorai.009G316100 Gossypium raimondii HOM05D004296 ORTHO05D005045 1.1e-41 174.5 251 42.6
Thecc.03G278500 Theobroma cacao HOM05D004296 ORTHO05D005045 2.9e-39 166.4 269 41.6
COL.COLO4_34461 Corchorus olitorius HOM05D001502 ORTHO05D002950 1.4e-38 164.1 242 42.6
Eucgr.D01846 Eucalyptus grandis HOM05D004296 ORTHO05D005045 4.2e-38 162.5 258 38.8
Cpa.g.sc45.44 Carica papaya HOM05D004296 ORTHO05D005045 5.5e-38 162.2 258 41.9
Haze_22818 Corylus avellana HOM05D004296 ORTHO05D005045 1.6e-37 160.6 263 42.6
Atru.chr9.2192 Acer truncatum HOM05D004296 ORTHO05D005045 4.7e-37 159.1 295 40.7
Cfa013198 Carpinus fangiana HOM05D004296 ORTHO05D005045 2.3e-36 156.8 264 42.8
QL12p012797 Quercus lobata HOM05D004296 ORTHO05D005045 3.0e-36 156.4 260 42.7
Manes.01G061800 Manihot esculenta HOM05D004296 ORTHO05D005045 5.2e-36 155.6 264 41.3
Hma1.2p1_0896F.1_g234000 Hydrangea macrophylla HOM05D004296 ORTHO05D005045 1.1e-35 154.5 295 40.0
Sc01g0009550 Simmondsia chinensis HOM05D004296 ORTHO05D005045 7.4e-35 151.8 284 40.1
VMungo1080G1277 Vigna mungo HOM05D004296 ORTHO05D005045 9.7e-35 151.4 245 40.0
CSS0003782 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 4.8e-34 149.1 298 38.6
Cc10_g03910 Coffea canephora HOM05D004296 ORTHO05D005045 4.8e-34 149.1 236 43.2
TAR375G1065 Trochodendron aralioides HOM05D004296 ORTHO05D005045 4.8e-34 149.1 282 38.7
CSS0030285 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 8.2e-34 148.3 298 37.6
FAN07G0166 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.1e-33 147.9 277 37.9
Lalb_Chr20g0109121 Lupinus albus HOM05D004296 ORTHO05D005045 1.1e-33 147.9 267 37.5
Medtr0768s0010 Medicago truncatula HOM05D004296 ORTHO05D005045 3.1e-33 146.4 262 38.2
Glyma.20G061500 Glycine max HOM05D004296 ORTHO05D005045 7.0e-33 145.2 243 40.7
Nn1g01503 Nelumbo nucifera HOM05D004296 ORTHO05D005045 9.1e-33 144.8 283 39.6
FvH4_5g02380 Fragaria vesca HOM05D004296 ORTHO05D005045 2.0e-32 143.7 289 36.7
TPR.G3981 Trifolium pratense HOM05D004296 ORTHO05D005045 2.0e-32 143.7 257 38.1
Dinv38945 Davidia involucrata HOM05D004296 ORTHO05D005045 2.6e-32 143.3 269 37.9
Medtr6g011320 Medicago truncatula HOM05D004296 ORTHO05D005045 2.6e-32 143.3 276 38.0
Phvul.005G126900 Phaseolus vulgaris HOM05D004296 ORTHO05D005045 3.5e-32 142.9 256 36.3
Rhsim02G0231000 Rhododendron simsii HOM05D004296 ORTHO05D005045 3.5e-32 142.9 265 38.9
DCAR_000614 Daucus carota HOM05D004296 ORTHO05D005045 5.9e-32 142.1 280 38.2
FAN04G1575 Fragaria x ananassa HOM05D004296 ORTHO05D005045 5.9e-32 142.1 289 37.7
TWI18G1338 Tripterygium wilfordii HOM05D004296 ORTHO05D005045 7.7e-32 141.7 270 38.1
TAR268G0002 Trochodendron aralioides HOM05D004296 ORTHO05D005045 7.7e-32 141.7 282 39.0
RcHm_v2.0_Chr7g0197731 Rosa chinensis HOM05D004296 ORTHO05D005045 1.0e-31 141.4 281 36.3
Cpa.g.sc39.99 Carica papaya HOM05D004296 ORTHO05D005045 1.3e-31 141.0 142 51.4
Ciclev10002111m.g Citrus clementina HOM05D004296 ORTHO05D005045 1.3e-31 141.0 269 39.0
Migut.A00767 Erythranthe guttata HOM05D004296 ORTHO05D005045 1.3e-31 141.0 290 35.2
MBI18_g42175_MAGBIO Magnolia biondii HOM05D004296 ORTHO05D005045 2.2e-31 140.2 278 35.6
Peaxi162Scf00014g00082 Petunia axillaris HOM05D004296 ORTHO05D005045 8.5e-31 138.3 320 38.4
FAN12G3540 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.5e-30 137.5 276 37.0
Peaxi162Scf00119g00828 Petunia axillaris HOM05D004296 ORTHO05D005045 1.5e-30 137.5 340 35.3
Phvul.002G157700 Phaseolus vulgaris HOM05D004296 ORTHO05D005045 1.5e-30 137.5 258 38.0
MSTRG.11985 Avicennia marina HOM05D004296 ORTHO05D005045 3.2e-30 136.3 264 36.4
PSO782G5383 Papaver somniferum HOM05D004296 ORTHO05D005045 3.2e-30 136.3 315 33.3
CSS0037206 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 4.2e-30 136.0 291 38.5
CiPaw.08G074700 Carya illinoinensis HOM05D004296 ORTHO05D005045 4.2e-30 136.0 289 38.1
TWI36G1592 Tripterygium wilfordii HOM05D004296 ORTHO05D005045 4.2e-30 136.0 279 36.9
Glyma.01G220000 Glycine max HOM05D004296 ORTHO05D005045 7.2e-30 135.2 259 38.2
PGR031G2604 Punica granatum HOM05D004296 ORTHO05D005045 9.4e-30 134.8 220 42.7
SGA_v2.0_scaffold96G28938 Striga asiatica HOM05D004296 ORTHO05D005045 9.4e-30 134.8 252 36.9
MSTRG.11987 Avicennia marina HOM05D004296 ORTHO05D005045 2.1e-29 133.7 264 35.2
CAN.G774.35 Capsicum annuum HOM05D004296 ORTHO05D005045 2.1e-29 133.7 301 35.9
Sopen04g002480 Solanum pennellii HOM05D004296 ORTHO05D005045 3.6e-29 132.9 147 48.3
Nitab4.5_0011683g0020 Nicotiana tabacum HOM05D004296 ORTHO05D005045 6.1e-29 132.1 345 34.5
Solyc04g007420.4 Solanum lycopersicum HOM05D004296 ORTHO05D005045 1.8e-28 130.6 310 33.5
arahy.Tifrunner.gnm1.ann1.SKNY54 Arachis hypogaea HOM05D004296 ORTHO05D005045 2.3e-28 130.2 250 36.4
Nitab4.5_0001615g0200 Nicotiana tabacum HOM05D004296 ORTHO05D005045 2.3e-28 130.2 306 35.9
PGSC0003DMG400012342 Solanum tuberosum HOM05D004296 ORTHO05D005045 2.3e-28 130.2 316 33.9
Ah.12g054620 Amaranthus hybridus HOM05D004296 ORTHO05D005045 3.0e-28 129.8 327 33.3
Solyc08g081040.3 Solanum lycopersicum HOM05D004296 ORTHO05D005045 5.2e-28 129.0 147 46.9
Aqoxy3G03757 Aquilegia oxysepala HOM05D004296 ORTHO05D005045 6.8e-28 128.6 267 35.6
ClCG07G008080 Citrullus lanatus HOM05D004296 ORTHO05D005045 6.8e-28 128.6 254 39.4
PSO478G0046 Papaver somniferum HOM05D004296 ORTHO05D005045 8.8e-28 128.3 320 37.5
SalBow1G8718 Salvia bowleyana HOM05D004296 ORTHO05D005045 1.2e-27 127.9 261 36.8
LjContig00312_ERROPOS870357g0005117 Lotus japonicus HOM05D004296 ORTHO05D005045 1.5e-27 127.5 261 36.0
EL10Ac8g19045 Beta vulgaris HOM05D004296 ORTHO05D005045 2.0e-27 127.1 271 36.5
FAN08G1593 Fragaria x ananassa HOM05D004296 ORTHO05D005045 2.0e-27 127.1 289 33.6
arahy.Tifrunner.gnm1.ann1.KQ253K Arachis hypogaea HOM05D004296 ORTHO05D005045 2.6e-27 126.7 251 35.9
Hund05589 Selenicereus undatus HOM05D004296 ORTHO05D005045 4.4e-27 125.9 258 38.4
PGSC0003DMG401005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 5.7e-27 125.6 147 46.9
Actinidia02008 Actinidia chinensis HOM05D004296 ORTHO05D005045 7.5e-27 125.2 253 36.8
PGSC0003DMG403005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 7.5e-27 125.2 147 46.9
Lj8C228T3 Lonicera japonica HOM05D004296 ORTHO05D005045 9.7e-27 124.8 151 46.4
Sopen08g029360 Solanum pennellii HOM05D004296 ORTHO05D005045 9.7e-27 124.8 147 46.3
Oeu009155.1 Olea europaea HOM05D004296 ORTHO05D005045 1.3e-26 124.4 285 35.8
FAN12G1413 Fragaria x ananassa HOM05D004296 ORTHO05D005045 2.2e-26 123.6 282 32.3
FvH4_4g36830 Fragaria vesca HOM05D004296 ORTHO05D005045 3.7e-26 122.9 279 31.2
Lsat_1_v5_gn_5_92680 Lactuca sativa HOM05D004296 ORTHO05D005045 1.1e-25 121.3 269 33.8
Lsat_1_v5_gn_6_87401 Lactuca sativa HOM05D004296 ORTHO05D005045 1.1e-25 121.3 241 35.7
MD14G1104200 Malus domestica HOM05D004296 ORTHO05D005045 1.4e-25 120.9 172 40.7
Prupe.5G099900 Prunus persica HOM05D004296 ORTHO05D005045 1.8e-25 120.6 149 45.6
Psat1g061240 Pisum sativum HOM05D004296 ORTHO05D005045 3.1e-25 119.8 152 42.8
Psat7g254600 Pisum sativum HOM05D004296 ORTHO05D005045 3.1e-25 119.8 212 36.8
Lj2A555T5 Lonicera japonica HOM05D004296 ORTHO05D005045 4.1e-25 119.4 216 37.0
Aqoxy3G00118 Aquilegia oxysepala HOM05D004296 ORTHO05D005045 7.0e-25 118.6 267 34.8
Sed0022715 Sechium edule HOM05D004296 ORTHO05D005045 7.0e-25 118.6 123 48.8
FAN17G1800 Fragaria x ananassa HOM05D004296 ORTHO05D005045 9.1e-25 118.2 267 31.5
Potri.003G127200 Populus trichocarpa HOM05D004296 ORTHO05D005045 1.0e-23 114.8 155 41.9
AUR62007249 Chenopodium quinoa HOM05D004296 ORTHO05D005045 1.3e-23 114.4 302 31.8
Hund17074 Selenicereus undatus HOM05D004296 ORTHO05D005045 1.3e-23 114.4 250 34.4
Lalb_Chr09g0320981 Lupinus albus HOM05D004296 ORTHO05D005045 3.8e-23 112.8 242 35.5
PSO210G3801 Papaver somniferum HOM05D004296 ORTHO05D005045 3.8e-23 112.8 126 50.0
SHI24854 Sapria himalayana HOM05D004296 ORTHO05D005045 5.0e-23 112.5 157 42.0
TPR.G4254 Trifolium pratense HOM05D004296 ORTHO05D005045 8.5e-23 111.7 246 33.7
unitig_32.g11599 Utricularia gibba HOM05D004296 ORTHO05D005045 8.5e-23 111.7 271 31.7
CDE01G0178 Ceratophyllum demersum HOM05D004296 ORTHO05D005045 1.1e-22 111.3 245 33.1
MD07G1059600 Malus domestica HOM05D004296 ORTHO05D005045 1.9e-22 110.5 300 31.0
CsaV3_4G005960 Cucumis sativus L. HOM05D004296 ORTHO05D005045 4.2e-22 109.4 308 33.4
FAN07G0122 Fragaria x ananassa HOM05D004296 ORTHO05D005045 4.2e-22 109.4 267 30.3
SalBow7G4152 Salvia bowleyana HOM05D004296 ORTHO05D005045 4.2e-22 109.4 210 35.7
QL05p087372 Quercus lobata HOM05D004296 ORTHO05D005045 5.5e-22 109.0 277 33.9
HanXRQChr03g0086721 Helianthus annuus HOM05D004296 ORTHO05D005045 9.4e-22 108.2 308 28.9
arahy.Tifrunner.gnm1.ann1.CEX2YD Arachis hypogaea HOM05D004296 ORTHO05D005045 2.7e-21 106.7 136 43.4
CSS0027171 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 2.7e-21 106.7 170 41.8
HanXRQChr03g0086731 Helianthus annuus HOM05D004296 ORTHO05D005045 2.7e-21 106.7 305 29.5
Psat0s5346g0040 Pisum sativum HOM05D002378 ORTHO05D002936 2.7e-21 106.7 214 35.5
CAN.G1069.19 Capsicum annuum HOM05D004296 ORTHO05D005045 6.1e-21 105.5 112 46.4
CDE04G2006 Ceratophyllum demersum HOM05D004296 ORTHO05D005045 6.1e-21 105.5 242 31.8
MELO3C016352.2 Cucumis melo HOM05D004296 ORTHO05D005045 6.1e-21 105.5 355 29.9
Actinidia14560 Actinidia chinensis HOM05D004296 ORTHO05D005045 8.0e-21 105.1 284 32.4
arahy.Tifrunner.gnm1.ann1.W3QJXS Arachis hypogaea HOM05D004296 ORTHO05D005045 8.0e-21 105.1 229 34.9
CSS0028138 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 8.0e-21 105.1 170 41.2
Lj8A231T11 Lonicera japonica HOM05D004296 ORTHO05D005045 1.4e-20 104.4 373 29.0
Sed0002821 Sechium edule HOM05D004296 ORTHO05D005045 3.0e-20 103.2 270 33.0
ECA240G3612 Erigeron canadensis HOM05D004296 ORTHO05D005045 6.8e-20 102.1 159 37.1
Oeu020615.1 Olea europaea HOM05D004296 ORTHO05D005045 1.2e-19 101.3 316 27.8
ATR0680G148 Amborella trichopoda HOM05D004296 ORTHO05D005045 2.8e-18 96.7 288 31.9
HPP92_021782 Vanilla planifolia HOM05D004296 ORTHO05D005045 6.3e-18 95.5 240 32.1
Os01g0541600 Oryza sativa ssp. japonica HOM05D004296 ORTHO05D005045 1.8e-17 94.0 121 43.8
FAN18G3255 Fragaria x ananassa HOM05D004296 ORTHO05D005045 5.9e-16 89.0 83 49.4
Rhsim02G0230400 Rhododendron simsii HOM05D004296 ORTHO05D005045 7.7e-16 88.6 238 35.7
Zm00001eb162950 Zea mays HOM05D004296 ORTHO05D005045 7.7e-16 88.6 119 40.3
Rhsim02G0230900 Rhododendron simsii HOM05D004296 ORTHO05D005045 2.5e-14 83.6 183 34.4
FAN13G2230 Fragaria x ananassa HOM05D004296 ORTHO05D005045 8.0e-13 78.6 117 38.5
Haze_21601 Corylus avellana HOM05D004296 ORTHO05D005045 1.8e-12 77.4 243 32.5
PSO210G3847 Papaver somniferum HOM05D004296 ORTHO05D005045 1.8e-12 77.4 254 31.1
AUR62018749 Chenopodium quinoa HOM05D004296 ORTHO05D005045 5.2e-12 75.9 298 27.5
SEGI_21744 Sequoiadendron giganteum HOM05D004296 ORTHO05D005045 2.6e-11 73.6 222 30.2
Nitab4.5_0003441g0080 Nicotiana tabacum HOM05D004296 ORTHO05D005045 9.8e-11 71.6 102 45.1
Sabra01G0078900 Salix brachista HOM05D004296 ORTHO05D005045 1.7e-10 70.9 79 50.6
Pp3c22_14200 Physcomitrium patens HOM05D004296 ORTHO05D005045 2.2e-10 70.5 120 40.0
Mapoly0057s0058 Marchantia polymorpha HOM05D004296 ORTHO05D005045 8.3e-10 68.6 252 27.0
PGSC0003DMG402005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 1.3e-07 61.2 61 47.5
AagrBONN_evm.TU.Sc2ySwM_228.2126 Anthoceros agrestis HOM05D004296 ORTHO05D005045 1.9e-06 57.4 121 31.4


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