Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 2.3e-66 255.4 124 100.0
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 6.9e-55 217.2 124 86.3
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 2.6e-54 215.3 125 86.4
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 4.5e-54 214.5 124 85.5
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 1.7e-53 212.6 124 85.5
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 1.7e-53 212.6 124 85.5
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 3.2e-52 208.4 124 84.7
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 3.2e-52 208.4 124 84.7
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 3.2e-52 208.4 124 84.7
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 3.2e-52 208.4 125 84.8
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 5.9e-46 187.6 127 75.6
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 7.4e-41 170.6 125 68.8
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 1.3e-40 169.9 113 72.6
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 1.1e-39 166.8 98 79.6
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 1.4e-39 166.4 114 71.1
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 2.4e-39 165.6 113 70.8
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 3.1e-39 165.2 97 79.4
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 4.1e-39 164.9 117 67.5
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 4.1e-39 164.9 117 67.5
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 4.1e-39 164.9 113 70.8
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 6.9e-39 164.1 99 76.8
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 9.1e-39 163.7 125 62.4
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 9.1e-39 163.7 98 77.6
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 9.1e-39 163.7 111 73.0
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 9.1e-39 163.7 98 77.6
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 1.2e-38 163.3 98 76.5
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 1.5e-38 162.9 98 77.6
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.5e-38 162.9 98 77.6
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.5e-38 162.9 98 77.6
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.5e-38 162.9 98 77.6
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 1.5e-38 162.9 99 75.8
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 1.5e-38 162.9 99 75.8
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 2.0e-38 162.5 113 70.8
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 2.6e-38 162.2 128 67.2
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 2.6e-38 162.2 128 67.2
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 2.6e-38 162.2 95 77.9
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 2.6e-38 162.2 95 77.9
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 2.6e-38 162.2 98 75.5
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 3.4e-38 161.8 126 64.3
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 3.4e-38 161.8 113 69.9
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 4.5e-38 161.4 96 78.1
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 4.5e-38 161.4 98 76.5
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 4.5e-38 161.4 124 67.7
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 5.9e-38 161.0 107 74.8
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 7.7e-38 160.6 98 74.5
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 7.7e-38 160.6 97 77.3
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 1.0e-37 160.2 99 74.7
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 1.0e-37 160.2 97 78.4
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.0e-37 160.2 98 76.5
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.0e-37 160.2 97 75.3
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 1.3e-37 159.8 99 74.7
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 1.3e-37 159.8 97 76.3
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 1.3e-37 159.8 97 76.3
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 1.7e-37 159.5 112 71.4
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 2.9e-37 158.7 98 78.6
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 5.0e-37 157.9 97 74.2
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 5.0e-37 157.9 97 76.3
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 6.5e-37 157.5 99 76.8
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 6.5e-37 157.5 99 76.8
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 8.5e-37 157.1 121 60.3
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 1.1e-36 156.8 97 75.3
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.1e-36 156.8 96 74.0
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 1.9e-36 156.0 97 74.2
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 1.9e-36 156.0 124 66.1
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 2.5e-36 155.6 100 72.0
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 5.5e-36 154.5 121 59.5
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 7.2e-36 154.1 110 66.4
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 7.2e-36 154.1 121 65.3
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 9.4e-36 153.7 113 64.6
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 1.2e-35 153.3 126 62.7
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 2.7e-35 152.1 126 62.7
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 2.7e-35 152.1 97 74.2
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 2.7e-35 152.1 98 73.5
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 3.6e-35 151.8 111 65.8
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 4.7e-35 151.4 107 69.2
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 4.7e-35 151.4 110 65.5
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 6.1e-35 151.0 98 74.5
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 6.1e-35 151.0 128 60.9
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 1.8e-34 149.4 125 65.6
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 3.9e-34 148.3 97 73.2
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 1.1e-33 146.7 97 68.0
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 2.0e-33 146.0 89 75.3
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 2.0e-33 146.0 105 62.9
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 2.8e-32 142.1 82 78.0
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 3.7e-32 141.7 125 58.4
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 6.3e-32 141.0 110 63.6
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 1.1e-31 140.2 109 59.6
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 2.5e-28 129.0 98 61.2
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 8.0e-27 124.0 101 55.4
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 1.0e-26 123.6 105 54.3
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 9.7e-25 117.1 91 62.6
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 2.2e-24 115.9 94 59.6
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 1.8e-23 112.8 94 48.9
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 5.3e-23 111.3 94 60.6
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 4.5e-22 108.2 99 48.5
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 7.2e-20 100.9 64 73.4
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 1.2e-19 100.1 60 78.3
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 2.0e-14 82.8 77 46.8
MCO04G361 Micromonas commoda HOM05D007622 ORTHO05D009409 3.7e-08 62.0 77 39.0
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 3.5e-06 55.5 58 53.4


User provided reference genes

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