Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G40180 Arabidopsis thaliana HOM05D000337 ORTHO05D081817 6.9e-30 133.3 65 100.0
Thhalv10028055m.g Eutrema salsugineum HOM05D000337 ORTHO05D000297 1.9e-19 98.6 80 67.5
Sp7g01820 Schrenkiella parvula HOM05D000337 ORTHO05D000297 1.9e-16 88.6 80 61.2
BcaC03g17503 Brassica carinata HOM05D000337 ORTHO05D000297 2.8e-15 84.7 84 54.8
C02p54650 Brassica napus HOM05D000337 ORTHO05D000297 2.8e-15 84.7 84 54.8
BolC2t11527H Brassica oleracea HOM05D000337 ORTHO05D000297 2.8e-15 84.7 84 54.8
AL7G49810 Arabidopsis lyrata HOM05D000337 ORTHO05D000297 3.7e-15 84.3 59 74.6
BcaB07g30133 Brassica carinata HOM05D000337 ORTHO05D000297 2.4e-14 81.6 84 52.4
Aa31LG2G4730 Aethionema arabicum HOM05D000337 ORTHO05D000297 3.1e-14 81.3 80 53.8
BcaC06g30931 Brassica carinata HOM05D000337 ORTHO05D000297 3.1e-14 81.3 84 53.6
BcaC06g33755 Brassica carinata HOM05D000337 ORTHO05D000297 3.1e-14 81.3 84 53.6
A06p40660 Brassica napus HOM05D000337 ORTHO05D000297 3.1e-14 81.3 84 53.6
BraA06t26986Z Brassica rapa HOM05D000337 ORTHO05D000297 3.1e-14 81.3 84 53.6
Thhalv10005387m.g Eutrema salsugineum HOM05D000337 ORTHO05D000297 3.1e-14 81.3 84 54.8
Sp2g17080 Schrenkiella parvula HOM05D000337 ORTHO05D000297 3.1e-14 81.3 80 57.5
AT3G28150 Arabidopsis thaliana HOM05D000337 ORTHO05D000297 4.1e-14 80.9 80 56.2
BcaC06g33749 Brassica carinata HOM05D000337 ORTHO05D000297 4.1e-14 80.9 84 53.6
C07p37340 Brassica napus HOM05D000337 ORTHO05D000297 4.1e-14 80.9 84 53.6
BolC7t44244H Brassica oleracea HOM05D000337 ORTHO05D000297 4.1e-14 80.9 84 53.6
THA.LOC104805411 Tarenaya hassleriana HOM05D000337 ORTHO05D000297 4.1e-14 80.9 80 55.0
A02p35790 Brassica napus HOM05D000337 ORTHO05D000297 6.9e-14 80.1 84 51.2
BraA02t08579Z Brassica rapa HOM05D000337 ORTHO05D000297 6.9e-14 80.1 84 51.2
CARHR149790 Cardamine hirsuta HOM05D000337 ORTHO05D000297 1.5e-13 79.0 80 53.8
Carub.0005s0667 Capsella rubella HOM05D000337 ORTHO05D000297 2.6e-13 78.2 78 55.1
Carub.0007s3547 Capsella rubella HOM05D000337 ORTHO05D000297 7.6e-13 76.6 59 69.5
AL5G17650 Arabidopsis lyrata HOM05D000337 ORTHO05D000297 2.2e-12 75.1 80 53.8
BcaC06g33751 Brassica carinata HOM05D000337 ORTHO05D000297 1.9e-11 72.0 71 56.3
CiPaw.03G035500 Carya illinoinensis HOM05D000337 ORTHO05D000297 1.9e-11 72.0 80 51.2
ClCG10G014470 Citrullus lanatus HOM05D000337 ORTHO05D000297 5.5e-11 70.5 78 51.3
CsaV3_3G042110 Cucumis sativus L. HOM05D000337 ORTHO05D000297 5.5e-11 70.5 78 51.3
MELO3C009930.2 Cucumis melo HOM05D000337 ORTHO05D000297 7.2e-11 70.1 78 51.3
arahy.Tifrunner.gnm1.ann1.YH4M25 Arachis hypogaea HOM05D000337 ORTHO05D000297 3.5e-10 67.8 80 47.5
Cpa.g.sc286.4 Carica papaya HOM05D000337 ORTHO05D000297 3.5e-10 67.8 80 50.0
FvH4_6g50300 Fragaria vesca HOM05D000337 ORTHO05D000297 3.5e-10 67.8 80 50.0
QL02p077658 Quercus lobata HOM05D000337 ORTHO05D000297 3.5e-10 67.8 80 50.0
FvH4_6g50320 Fragaria vesca HOM05D000337 ORTHO05D000297 4.6e-10 67.4 80 48.8
FAN02G1979 Fragaria x ananassa HOM05D000337 ORTHO05D000297 4.6e-10 67.4 80 48.8
FAN05G3581 Fragaria x ananassa HOM05D000337 ORTHO05D000297 4.6e-10 67.4 80 48.8
VMungo0464G0286 Vigna mungo HOM05D000337 ORTHO05D000297 4.6e-10 67.4 80 47.5
FAN09G0685 Fragaria x ananassa HOM05D000337 ORTHO05D000297 6.1e-10 67.0 80 47.5
Prupe.3G280300 Prunus persica HOM05D000337 ORTHO05D000297 6.1e-10 67.0 80 48.8
RcHm_v2.0_Chr2g0170621 Rosa chinensis HOM05D000337 ORTHO05D000297 6.1e-10 67.0 80 47.5
Sed0006104 Sechium edule HOM05D000337 ORTHO05D000297 6.1e-10 67.0 78 48.7
GSVIVG01032519001 Vitis vinifera HOM05D000337 ORTHO05D000297 6.1e-10 67.0 78 48.7
FAN14G3068 Fragaria x ananassa HOM05D000337 ORTHO05D000297 7.9e-10 66.6 80 48.8
Phvul.004G019300 Phaseolus vulgaris HOM05D000337 ORTHO05D000297 7.9e-10 66.6 80 47.5
Psat1g060680 Pisum sativum HOM05D000337 ORTHO05D000297 7.9e-10 66.6 80 48.8
MD09G1037400 Malus domestica HOM05D000337 ORTHO05D000297 1.3e-09 65.9 80 47.5
Medtr6g007777 Medicago truncatula HOM05D000337 ORTHO05D000297 1.3e-09 65.9 80 48.8
Atru.chr6.2170 Acer truncatum HOM05D000337 ORTHO05D000297 1.8e-09 65.5 80 48.8
Duzib147G0040 Durio zibethinus HOM05D000337 ORTHO05D000297 1.8e-09 65.5 78 51.3
Actinidia33969 Actinidia chinensis HOM05D000337 ORTHO05D000297 2.3e-09 65.1 79 48.1
Cfa007460 Carpinus fangiana HOM05D000337 ORTHO05D000297 2.3e-09 65.1 80 48.8
Glyma.19G012100 Glycine max HOM05D000337 ORTHO05D000297 2.3e-09 65.1 80 45.0
MD17G1038700 Malus domestica HOM05D000337 ORTHO05D000297 2.3e-09 65.1 80 43.8
Thecc.04G004800 Theobroma cacao HOM05D000337 ORTHO05D000297 2.3e-09 65.1 78 50.0
Haze_14636 Corylus avellana HOM05D000337 ORTHO05D000297 3.9e-09 64.3 80 47.5
QL02p077640 Quercus lobata HOM05D000337 ORTHO05D000297 3.9e-09 64.3 80 48.8
Dinv33519 Davidia involucrata HOM05D000337 ORTHO05D000297 5.1e-09 63.9 80 47.5
Lj2g0003649 Lotus japonicus HOM05D000337 ORTHO05D000297 5.1e-09 63.9 80 46.2
CANSAT64G2115 Cannabis sativa HOM05D000337 ORTHO05D000297 6.7e-09 63.5 80 47.5
Ciclev10015360m.g Citrus clementina HOM05D000337 ORTHO05D000297 8.7e-09 63.2 78 50.0
Duzib264G0042 Durio zibethinus HOM05D000337 ORTHO05D000297 8.7e-09 63.2 78 51.3
Glyma.13G070700 Glycine max HOM05D000337 ORTHO05D000297 8.7e-09 63.2 80 42.5
CDE10G0856 Ceratophyllum demersum HOM05D000337 ORTHO05D000297 1.1e-08 62.8 78 47.4
Manes.15G180100 Manihot esculenta HOM05D000337 ORTHO05D000297 1.1e-08 62.8 78 48.7
arahy.Tifrunner.gnm1.ann1.31MX3X Arachis hypogaea HOM05D000337 ORTHO05D000297 1.5e-08 62.4 80 43.8
arahy.Tifrunner.gnm1.ann1.P6LX0W Arachis hypogaea HOM05D000337 ORTHO05D000297 1.5e-08 62.4 80 43.8
Lalb_Chr02g0159731 Lupinus albus HOM05D000337 ORTHO05D000297 3.3e-08 61.2 80 41.2
Lju41A32G60 Lonicera japonica HOM05D000337 ORTHO05D000297 4.3e-08 60.8 79 46.8
Sabra17G0064500 Salix brachista HOM05D000337 ORTHO05D000297 4.3e-08 60.8 78 47.4
TWI56G0538 Tripterygium wilfordii HOM05D000337 ORTHO05D000297 4.3e-08 60.8 78 47.4
COL.COLO4_32006 Corchorus olitorius HOM05D000337 ORTHO05D000297 5.7e-08 60.5 78 47.4
arahy.Tifrunner.gnm1.ann1.MDT0NR Arachis hypogaea HOM05D000337 ORTHO05D000297 7.4e-08 60.1 59 54.2
Nitab4.5_0001952g0120 Nicotiana tabacum HOM05D000337 ORTHO05D000297 7.4e-08 60.1 80 47.5
PGR142G3241 Punica granatum HOM05D000337 ORTHO05D000297 7.4e-08 60.1 80 47.5
Aqoxy3G00930 Aquilegia oxysepala HOM05D000337 ORTHO05D000297 9.7e-08 59.7 78 46.2
MD09G1037300 Malus domestica HOM05D000337 ORTHO05D000297 9.7e-08 59.7 80 46.2
Peaxi162Scf00129g00941 Petunia axillaris HOM05D000337 ORTHO05D000297 9.7e-08 59.7 80 45.0
Atru.chr6.2169 Acer truncatum HOM05D000337 ORTHO05D000297 1.3e-07 59.3 78 46.2
Gohir.A11G068100 Gossypium hirsutum HOM05D000337 ORTHO05D000297 1.3e-07 59.3 80 46.2
Nn4g22870 Nelumbo nucifera HOM05D000337 ORTHO05D000297 1.3e-07 59.3 78 47.4
CAN.G206.52 Capsicum annuum HOM05D000337 ORTHO05D000297 1.6e-07 58.9 80 46.2
Gohir.D11G071900 Gossypium hirsutum HOM05D000337 ORTHO05D000297 1.6e-07 58.9 80 46.2
PSO541G4027 Papaver somniferum HOM05D000337 ORTHO05D000297 1.6e-07 58.9 78 43.6
PSO541G5280 Papaver somniferum HOM05D000337 ORTHO05D000297 1.6e-07 58.9 78 43.6
PSO675G0171 Papaver somniferum HOM05D000337 ORTHO05D000297 1.6e-07 58.9 78 43.6
CARHR261940 Cardamine hirsuta HOM05D000337 ORTHO05D000297 2.8e-07 58.2 31 87.1
Potri.017G073700 Populus trichocarpa HOM05D000337 ORTHO05D000297 2.8e-07 58.2 78 46.2
Solyc02g087120.4 Solanum lycopersicum HOM05D000337 ORTHO05D000297 2.8e-07 58.2 80 43.8
HPP92_010522 Vanilla planifolia HOM05D000337 ORTHO05D000297 2.8e-07 58.2 78 41.0
Aqoxy3G00931 Aquilegia oxysepala HOM05D000337 ORTHO05D000297 3.7e-07 57.8 80 42.5
PSO017G0726 Papaver somniferum HOM05D000337 ORTHO05D000297 3.7e-07 57.8 78 43.6
PSO017G3600 Papaver somniferum HOM05D000337 ORTHO05D000297 4.8e-07 57.4 78 42.3
Oeu062369.1 Olea europaea HOM05D000337 ORTHO05D000297 6.3e-07 57.0 80 47.5
Cc07_g02520 Coffea canephora HOM05D000337 ORTHO05D000297 1.1e-06 56.2 34 79.4
SalBow1G5119 Salvia bowleyana HOM05D000337 ORTHO05D000297 1.1e-06 56.2 80 43.8
SalBow1G7766 Salvia bowleyana HOM05D000337 ORTHO05D000297 1.1e-06 56.2 80 43.8
Sopen02g031870 Solanum pennellii HOM05D000337 ORTHO05D000297 1.1e-06 56.2 80 42.5
Aqoxy5G00147 Aquilegia oxysepala HOM05D000337 ORTHO05D000297 1.4e-06 55.8 78 44.9
EL10Ac2g03363 Beta vulgaris HOM05D000337 ORTHO05D000297 1.4e-06 55.8 80 42.5
PSO478G0095 Papaver somniferum HOM05D000337 ORTHO05D000297 1.4e-06 55.8 78 46.2
Potri.011G144100 Populus trichocarpa HOM05D000337 ORTHO05D000297 1.4e-06 55.8 80 43.8
AUR62001378 Chenopodium quinoa HOM05D000337 ORTHO05D000297 1.8e-06 55.5 78 42.3
AUR62044065 Chenopodium quinoa HOM05D000337 ORTHO05D000297 1.8e-06 55.5 78 42.3
Eucgr.I01832 Eucalyptus grandis HOM05D000337 ORTHO05D000297 2.4e-06 55.1 78 41.0
TAR629G0061 Trochodendron aralioides HOM05D000337 ORTHO05D000297 2.4e-06 55.1 78 43.6
MBI15_g12946_MAGBIO Magnolia biondii HOM05D000337 ORTHO05D000297 3.1e-06 54.7 78 41.0
CANSAT64G2425 Cannabis sativa HOM05D000337 ORTHO05D000297 4.1e-06 54.3 80 40.0
CANSAT64G2702 Cannabis sativa HOM05D000337 ORTHO05D000297 4.1e-06 54.3 80 41.2
Peaxi162Scf00434g00511 Petunia axillaris HOM05D000337 ORTHO05D000297 5.3e-06 53.9 80 42.5
Gohir.A05G361200 Gossypium hirsutum HOM05D000337 ORTHO05D000297 6.9e-06 53.5 80 40.0
Gohir.D04G053000 Gossypium hirsutum HOM05D000337 ORTHO05D000297 6.9e-06 53.5 30 80.0
Gorai.012G059500 Gossypium raimondii HOM05D000337 ORTHO05D000297 6.9e-06 53.5 30 80.0
SalBow1G1074 Salvia bowleyana HOM05D000337 ORTHO05D000297 6.9e-06 53.5 80 42.5
Cc08_g05340 Coffea canephora HOM05D000337 ORTHO05D000297 9.0e-06 53.1 30 76.7
PSO541G4548 Papaver somniferum HOM05D000337 ORTHO05D000297 9.0e-06 53.1 78 39.7
PSO675G9088 Papaver somniferum HOM05D000337 ORTHO05D000297 9.0e-06 53.1 28 89.3


User provided reference genes

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