Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 3.6e-85 318.2 157 100.0
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 2.2e-74 282.3 158 89.9
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 7.6e-67 257.3 157 83.4
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 8.4e-66 253.8 157 81.5
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 1.4e-65 253.1 157 82.2
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 5.5e-65 251.1 157 79.6
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 5.1e-63 244.6 157 77.1
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 1.9e-62 242.7 157 76.4
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 4.3e-62 241.5 157 76.4
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 4.3e-62 241.5 157 76.4
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 9.7e-62 240.4 157 76.4
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 9.7e-62 240.4 157 76.4
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 1.9e-49 199.5 157 67.5
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 1.9e-49 199.5 157 67.5
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 1.5e-43 179.9 157 59.9
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 1.3e-42 176.8 162 58.6
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 6.3e-37 157.9 163 55.2
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 5.3e-36 154.8 161 50.3
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 1.2e-35 153.7 163 49.7
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 2.6e-35 152.5 154 51.9
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 1.0e-34 150.6 159 50.9
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 1.7e-34 149.8 156 49.4
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 1.7e-34 149.8 131 54.2
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 3.8e-34 148.7 157 50.3
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 6.5e-34 147.9 164 48.8
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 1.5e-33 146.7 159 49.1
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.9e-33 146.4 91 70.3
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.9e-33 146.4 91 70.3
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 1.9e-33 146.4 163 47.2
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.5e-33 146.0 154 49.4
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.5e-33 146.0 91 70.3
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 4.2e-33 145.2 157 50.3
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 4.2e-33 145.2 134 53.7
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 7.2e-33 144.4 158 46.8
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 1.2e-32 143.7 101 63.4
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 1.2e-32 143.7 160 48.1
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 1.6e-32 143.3 106 63.2
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 2.1e-32 142.9 111 58.6
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 2.7e-32 142.5 160 47.5
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 2.7e-32 142.5 160 47.5
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 2.7e-32 142.5 153 47.7
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 3.6e-32 142.1 102 62.7
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 3.6e-32 142.1 147 47.6
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 3.6e-32 142.1 147 47.6
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 4.7e-32 141.7 157 45.9
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 4.7e-32 141.7 153 51.0
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 6.1e-32 141.4 90 70.0
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 6.1e-32 141.4 103 63.1
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 1.4e-31 140.2 100 63.0
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 1.8e-31 139.8 147 53.7
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 1.8e-31 139.8 162 48.1
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 3.0e-31 139.0 99 64.6
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 3.0e-31 139.0 153 50.3
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 3.0e-31 139.0 88 68.2
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 4.0e-31 138.7 157 49.7
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 4.0e-31 138.7 118 55.9
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 5.2e-31 138.3 111 61.3
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 6.7e-31 137.9 157 45.2
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 1.2e-30 137.1 156 46.2
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 1.2e-30 137.1 108 59.3
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 1.2e-30 137.1 157 47.1
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 2.0e-30 136.3 96 62.5
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 2.0e-30 136.3 105 59.0
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 2.6e-30 136.0 149 49.0
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 2.6e-30 136.0 88 64.8
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 3.3e-30 135.6 87 67.8
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 3.3e-30 135.6 87 67.8
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 4.4e-30 135.2 101 62.4
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 4.4e-30 135.2 88 64.8
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 7.5e-30 134.4 164 47.6
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 9.7e-30 134.0 123 55.3
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 1.3e-29 133.7 92 67.4
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 1.7e-29 133.3 153 47.1
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 2.2e-29 132.9 100 64.0
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 2.8e-29 132.5 92 65.2
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 3.7e-29 132.1 94 67.0
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 3.7e-29 132.1 87 67.8
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 4.8e-29 131.7 158 47.5
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 6.3e-29 131.3 159 45.9
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 6.3e-29 131.3 100 61.0
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 8.2e-29 131.0 101 58.4
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 1.1e-28 130.6 91 65.9
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 1.1e-28 130.6 92 65.2
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 1.4e-28 130.2 89 67.4
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 9.1e-28 127.5 84 66.7
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 1.2e-27 127.1 80 71.2
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 2.0e-27 126.3 102 55.9
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 2.0e-27 126.3 97 59.8
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 2.9e-26 122.5 88 62.5
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 3.8e-26 122.1 75 70.7
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 6.5e-26 121.3 162 41.4
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 2.0e-22 109.8 91 51.6
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 3.7e-21 105.5 86 52.3
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 1.4e-20 103.6 89 57.3
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 2.7e-19 99.4 82 53.7
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 1.9e-17 93.2 78 52.6
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 9.5e-17 90.9 80 52.5
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 2.8e-16 89.4 106 46.2
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 8.0e-16 87.8 68 57.4
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 3.8e-10 68.9 47 59.6
C04p49790 Brassica napus HOM05D007565 ORTHO05D009551 4.3e-09 65.5 63 52.4
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 5.6e-09 65.1 48 60.4


User provided reference genes

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