Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G38770 Arabidopsis thaliana HOM05D012419 ORTHO05D014425 1.2e-49 199.5 98 100.0
AL7G51670 Arabidopsis lyrata HOM05D012419 ORTHO05D014425 3.2e-39 164.9 101 85.1
Carub.0007s3710 Capsella rubella HOM05D012419 ORTHO05D014425 4.3e-36 154.5 101 79.2
SpUn0124_0010 Schrenkiella parvula HOM05D012419 ORTHO05D014425 2.6e-33 145.2 101 72.3
SpUn0185_0010 Schrenkiella parvula HOM05D012419 ORTHO05D014425 2.6e-33 145.2 101 72.3
CARHR264040 Cardamine hirsuta HOM05D012419 ORTHO05D014425 7.7e-33 143.7 101 74.3
BcaC02g09667 Brassica carinata HOM05D012419 ORTHO05D014425 3.2e-31 138.3 101 67.3
C04p45360 Brassica napus HOM05D012419 ORTHO05D014425 3.2e-31 138.3 101 67.3
BolC4t26118H Brassica oleracea HOM05D012419 ORTHO05D014425 3.2e-31 138.3 101 67.3
CARHR291810 Cardamine hirsuta HOM05D012419 ORTHO05D014425 7.2e-31 137.1 101 72.3
A04p11630 Brassica napus HOM05D012419 ORTHO05D014425 9.4e-31 136.7 101 68.3
BraA04t16831Z Brassica rapa HOM05D012419 ORTHO05D014425 9.4e-31 136.7 101 68.3
Thhalv10028105m.g Eutrema salsugineum HOM05D012419 ORTHO05D014425 4.7e-30 134.4 101 70.3
BcaB06g27241 Brassica carinata HOM05D012419 ORTHO05D014425 5.5e-23 110.9 89 61.8
Aa31LG9G16890 Aethionema arabicum HOM05D000926 ORTHO05D000707 3.7e-19 98.2 95 57.9
THA.LOC109116337 Tarenaya hassleriana HOM05D000926 ORTHO05D000707 1.1e-15 86.7 99 49.5
Duzib138G1671 Durio zibethinus HOM05D000926 ORTHO05D000707 7.7e-09 63.9 83 44.6
Thecc.04G113000 Theobroma cacao HOM05D000926 ORTHO05D000707 1.3e-08 63.2 76 48.7
Lalb_Chr10g0092471 Lupinus albus HOM05D000926 ORTHO05D000707 1.7e-08 62.8 81 48.1
Potri.004G108440 Populus trichocarpa HOM05D000926 ORTHO05D000707 1.7e-08 62.8 90 42.2
Psat1g064600 Pisum sativum HOM05D000926 ORTHO05D000707 2.9e-08 62.0 84 36.9
QL02p063891 Quercus lobata HOM05D000926 ORTHO05D000707 6.5e-08 60.8 86 44.2
Dinv34883 Davidia involucrata HOM05D000926 ORTHO05D000707 1.1e-07 60.1 86 46.5
Duzib211G0100 Durio zibethinus HOM05D000926 ORTHO05D000707 1.1e-07 60.1 80 42.5
Potri.017G107300 Populus trichocarpa HOM05D000926 ORTHO05D000707 1.1e-07 60.1 82 42.7
Cfa007731 Carpinus fangiana HOM05D000926 ORTHO05D000707 1.5e-07 59.7 84 42.9
Manes.02G062600 Manihot esculenta HOM05D000926 ORTHO05D000707 1.9e-07 59.3 83 39.8
CSS0017323 Camellia sinensis var. sinensis HOM05D000926 ORTHO05D000707 2.5e-07 58.9 88 42.0
Haze_14349 Corylus avellana HOM05D000926 ORTHO05D000707 4.2e-07 58.2 84 41.7
Potri.017G107400 Populus trichocarpa HOM05D000926 ORTHO05D000707 7.2e-07 57.4 89 37.1
Oeu049341.1 Olea europaea HOM05D000926 ORTHO05D000707 9.4e-07 57.0 80 42.5
Gohir.D07G185000 Gossypium hirsutum HOM05D000926 ORTHO05D000707 1.2e-06 56.6 80 45.0
Gorai.001G205500 Gossypium raimondii HOM05D000926 ORTHO05D000707 1.2e-06 56.6 80 45.0
Psat1g064720 Pisum sativum HOM05D000926 ORTHO05D000707 1.2e-06 56.6 84 36.9
ATR0691G108 Amborella trichopoda HOM05D000926 ORTHO05D000707 1.6e-06 56.2 96 39.6
Ciclev10013138m.g Citrus clementina HOM05D000926 ORTHO05D000707 1.6e-06 56.2 84 41.7
Gohir.A07G178200 Gossypium hirsutum HOM05D000926 ORTHO05D000707 2.1e-06 55.8 78 44.9
Manes.01G105900 Manihot esculenta HOM05D000926 ORTHO05D000707 2.1e-06 55.8 77 41.6
Sabra04G0074000 Salix brachista HOM05D000926 ORTHO05D000707 2.1e-06 55.8 91 38.5
TPR.G15947 Trifolium pratense HOM05D000926 ORTHO05D000707 2.7e-06 55.5 84 34.5
Potri.004G108680 Populus trichocarpa HOM05D000926 ORTHO05D000707 3.6e-06 55.1 81 40.7
Rhsim08G0078900 Rhododendron simsii HOM05D000926 ORTHO05D000707 3.6e-06 55.1 77 45.5
Aqoxy3G03797 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 4.7e-06 54.7 84 42.9
CiPaw.03G080100 Carya illinoinensis HOM05D000926 ORTHO05D000707 4.7e-06 54.7 92 41.3
Manes.02G062400 Manihot esculenta HOM05D000926 ORTHO05D000707 4.7e-06 54.7 78 39.7
TAR374G1048 Trochodendron aralioides HOM05D000926 ORTHO05D000707 4.7e-06 54.7 78 42.3
Medtr6g016480 Medicago truncatula HOM05D000926 ORTHO05D000707 6.1e-06 54.3 85 37.6
PGR004G2735 Punica granatum HOM05D000926 ORTHO05D000707 6.1e-06 54.3 91 40.7
Sabra04G0073900 Salix brachista HOM05D000926 ORTHO05D000707 8.0e-06 53.9 78 37.2


User provided reference genes

Program Settings