Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G38080 Arabidopsis thaliana HOM05D010165 ORTHO05D012312 5.5e-89 330.9 158 100.0
Carub.0007s3181 Capsella rubella HOM05D010165 ORTHO05D012312 3.0e-39 165.6 166 54.2
AL7G52840 Arabidopsis lyrata HOM05D010165 ORTHO05D012312 7.0e-36 154.5 152 56.6
AL7G52830 Arabidopsis lyrata HOM05D010165 ORTHO05D012312 2.7e-35 152.5 184 48.9
AL7G52820 Arabidopsis lyrata HOM05D010165 ORTHO05D012312 2.3e-26 122.9 179 40.8
AT5G38090 Arabidopsis thaliana HOM05D010165 ORTHO05D012312 2.3e-23 112.8 149 47.0
Thhalv10012097m.g Eutrema salsugineum HOM05D010165 ORTHO05D012312 1.5e-22 110.2 149 43.6
Thhalv10012133m.g Eutrema salsugineum HOM05D010165 ORTHO05D012312 1.6e-19 100.1 172 38.4
A09p60240 Brassica napus HOM05D010165 ORTHO05D012312 3.5e-19 99.0 150 42.7
A04p12310 Brassica napus HOM05D010165 ORTHO05D012312 1.9e-17 93.2 169 37.3
BraA04t16895Z Brassica rapa HOM05D010165 ORTHO05D012312 5.6e-17 91.7 169 37.3
Carub.0002s0737 Capsella rubella HOM05D010165 ORTHO05D012312 9.5e-17 90.9 169 35.5
Carub.0005s1238 Capsella rubella HOM05D010165 ORTHO05D012312 4.7e-16 88.6 118 49.2
BraA09t41394Z Brassica rapa HOM05D010165 ORTHO05D012312 6.8e-15 84.7 110 45.5
BcaC04g22015 Brassica carinata HOM05D010165 ORTHO05D012312 1.7e-13 80.1 162 35.8
C09p24600 Brassica napus HOM05D010165 ORTHO05D012312 1.7e-13 80.1 162 35.8
BolC9t55374H Brassica oleracea HOM05D010165 ORTHO05D012312 1.7e-13 80.1 152 34.9
AT1G45403 Arabidopsis thaliana HOM05D010165 ORTHO05D012312 2.2e-13 79.7 180 35.6
Carub.0002s0762 Capsella rubella HOM05D010165 ORTHO05D012312 1.4e-12 77.0 171 34.5
Carub.0002s0739 Capsella rubella HOM05D010165 ORTHO05D012312 3.5e-11 72.4 174 29.9
CARHR036080 Cardamine hirsuta HOM05D010165 ORTHO05D012312 3.0e-10 69.3 129 38.0


User provided reference genes

Program Settings