Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 2550.0 1267 100.0
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 2468.7 1267 96.8
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 2454.5 1268 96.4
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 2448.7 1267 96.1
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 2445.2 1267 95.4
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 2445.2 1267 95.7
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 2442.5 1267 95.5
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2441.8 1267 95.3
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 2440.2 1267 95.4
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2439.5 1267 95.3
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2415.2 1269 94.7
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 2399.0 1270 93.1
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 2333.9 1267 90.3
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 2218.4 1267 85.6
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 2204.5 1268 84.9
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 2204.5 1260 86.1
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 2202.6 1266 84.9
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 2201.4 1266 84.8
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 2200.6 1267 85.4
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 2199.9 1267 84.8
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 2198.7 1267 84.6
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 2196.8 1260 85.6
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 2194.5 1264 84.7
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 2192.9 1270 84.3
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 2191.4 1270 84.1
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2187.9 1267 84.7
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2187.1 1267 83.8
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2183.7 1267 84.5
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 2182.9 1267 84.1
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 2182.1 1268 84.0
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 2181.8 1267 83.7
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2181.0 1267 84.1
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 2181.0 1267 84.4
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2179.4 1267 83.9
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2177.9 1268 83.1
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2176.7 1270 83.4
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2172.9 1270 83.3
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2170.2 1268 83.1
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 2168.3 1268 82.6
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2167.5 1267 83.7
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 2164.8 1265 83.8
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2163.7 1266 83.1
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 2162.9 1267 82.4
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 2162.1 1267 83.4
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 2161.7 1265 83.1
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2160.2 1268 82.3
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 2159.8 1266 83.6
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 2159.8 1267 82.4
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2158.6 1266 82.9
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 2157.9 1275 82.4
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 2156.7 1265 82.2
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2156.7 1267 83.3
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2156.3 1267 82.9
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 2155.9 1267 83.3
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 2155.9 1271 82.3
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 2154.8 1267 82.2
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 2154.4 1263 83.1
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2153.3 1267 83.0
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 2152.9 1265 83.0
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2149.8 1259 83.4
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 2147.1 1270 81.9
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 2145.5 1267 81.7
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2143.6 1267 82.5
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2142.5 1238 84.2
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 2141.7 1265 82.5
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 2140.5 1266 82.7
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 2137.5 1271 81.4
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2135.5 1267 82.6
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 2134.0 1272 81.5
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 2132.1 1271 81.7
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 2130.9 1268 82.1
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 2127.1 1263 81.6
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 2126.7 1267 82.6
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 2125.9 1263 82.1
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 2122.8 1267 81.5
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 2122.4 1265 81.8
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 2122.1 1246 83.1
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2117.8 1270 80.9
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 2114.7 1268 80.8
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 2114.3 1267 81.5
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 2113.6 1271 80.8
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2109.7 1272 80.7
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 2107.0 1206 85.2
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 2095.5 1274 81.9
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2085.5 1072 95.8
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 2076.6 1271 79.6
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 2076.6 1271 79.9
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 2074.3 1264 79.9
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 2070.8 1259 80.2
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 2065.0 1257 80.0
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2064.7 1265 80.2
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2041.5 1270 78.1
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2023.8 1264 78.9
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 2008.4 1267 78.0
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1989.2 1263 77.4
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1973.0 1159 83.3
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1937.5 1276 74.2
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1889.8 1267 72.9
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1887.1 1271 73.2
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1854.3 1251 73.4
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1839.7 1265 71.7
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1837.4 1193 76.2
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1805.4 1089 80.7
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1791.9 1130 79.6
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1773.4 1268 70.4
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1763.4 1267 70.7
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1619.0 966 80.4
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1558.9 1324 62.2
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1550.4 1047 73.4
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1371.7 814 81.4
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1357.8 1264 59.4
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1338.2 1330 53.8
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1322.4 1390 52.9
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 0.0e+00 1242.6 725 82.6
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1173.7 1084 59.2
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1122.5 808 71.2
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 3.0e-262 909.4 570 78.9
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 3.3e-261 906.0 1246 41.7
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 7.9e-255 884.8 502 86.3
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 6.3e-228 795.4 673 61.5
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 4.7e-215 752.7 527 71.9
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.4e-198 698.0 450 78.0
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 6.6e-185 652.5 389 84.3
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 6.7e-129 466.5 362 66.3
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 7.7e-117 426.4 313 71.9
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 8.8e-105 386.3 270 72.6
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 1.2e-77 296.2 477 40.9
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.3e-68 266.2 169 74.0
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 4.3e-67 261.2 169 73.4
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 3.6e-66 258.1 169 72.2
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.3e-63 249.6 138 89.9
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 1.6e-58 232.6 234 54.7
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 3.4e-48 198.4 116 79.3
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 2.8e-42 178.7 152 66.4
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 4.9e-39 167.9 91 84.6
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 4.2e-38 164.9 192 52.1
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 9.3e-30 137.1 101 60.4
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.4e-25 123.2 104 60.6


User provided reference genes

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