Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G37478 Arabidopsis thaliana HOM05D002060 ORTHO05D002098 6.6e-67 257.3 136 100.0
AL7G46220 Arabidopsis lyrata HOM05D002060 ORTHO05D002098 5.8e-39 164.5 92 92.4
BolC4t26005H Brassica oleracea HOM05D002060 ORTHO05D002098 1.1e-34 150.2 93 86.0
Thhalv10027959m.g Eutrema salsugineum HOM05D002060 ORTHO05D002098 1.9e-34 149.4 92 85.9
Sp7g04720 Schrenkiella parvula HOM05D002060 ORTHO05D002098 3.3e-34 148.7 92 85.9
A04p10620 Brassica napus HOM05D002060 ORTHO05D002098 1.8e-32 142.9 92 83.7
BraA04t16725Z Brassica rapa HOM05D002060 ORTHO05D002098 1.8e-32 142.9 92 83.7
C04p44300 Brassica napus HOM05D002060 ORTHO05D002098 1.5e-31 139.8 92 82.6
A04p15240 Brassica napus HOM05D002060 ORTHO05D002098 5.8e-31 137.9 92 80.4
BraA04t17164Z Brassica rapa HOM05D002060 ORTHO05D002098 5.8e-31 137.9 92 80.4
C04p49460 Brassica napus HOM05D002060 ORTHO05D002098 1.3e-30 136.7 92 80.4
BolC4t26533H Brassica oleracea HOM05D002060 ORTHO05D002098 1.3e-30 136.7 92 80.4
CARHR215480 Cardamine hirsuta HOM05D002060 ORTHO05D002098 3.8e-30 135.2 92 82.6
Carub.0007s3264 Capsella rubella HOM05D002060 ORTHO05D002098 3.2e-29 132.1 94 79.8
C04p44310 Brassica napus HOM05D002060 ORTHO05D002098 3.4e-23 112.1 79 81.0
THA.LOC104805647 Tarenaya hassleriana HOM05D002060 ORTHO05D002098 4.5e-23 111.7 92 68.5
BcaB06g27073 Brassica carinata HOM05D002060 ORTHO05D002098 2.2e-17 92.8 59 83.1
BcaB06g27694 Brassica carinata HOM05D002060 ORTHO05D002098 4.8e-17 91.7 59 81.4
Lalb_Chr15g0085131 Lupinus albus HOM05D002060 ORTHO05D002098 6.7e-11 71.2 84 54.8
Medtr3g064800 Medicago truncatula HOM05D002060 ORTHO05D002098 5.7e-10 68.2 82 54.9
QL02p060063 Quercus lobata HOM05D002060 ORTHO05D002098 2.2e-09 66.2 86 51.2
BcaC02g09575 Brassica carinata HOM05D002060 ORTHO05D002098 3.7e-09 65.5 38 84.2
arahy.Tifrunner.gnm1.ann1.DD246K Arachis hypogaea HOM05D002060 ORTHO05D002098 1.4e-08 63.5 88 47.7
Prupe.3G016300 Prunus persica HOM05D002060 ORTHO05D002098 2.4e-08 62.8 81 49.4
arahy.Tifrunner.gnm1.ann1.V3589T Arachis hypogaea HOM05D002060 ORTHO05D002098 4.1e-08 62.0 88 47.7
Thecc.04G061200 Theobroma cacao HOM05D002060 ORTHO05D002098 7.0e-08 61.2 84 50.0
CiPaw.04G048700 Carya illinoinensis HOM05D002060 ORTHO05D002098 1.5e-07 60.1 86 52.3
Manes.01G121900 Manihot esculenta HOM05D002060 ORTHO05D002098 2.6e-07 59.3 86 51.2
TWI53G0944 Tripterygium wilfordii HOM05D002060 ORTHO05D002098 4.5e-07 58.5 45 64.4
CANSAT78G0020 Cannabis sativa HOM05D002060 ORTHO05D002098 5.9e-07 58.2 90 46.7
Duzib211G0346 Durio zibethinus HOM05D002060 ORTHO05D002098 1.0e-06 57.4 55 60.0
Cfa007769 Carpinus fangiana HOM05D002060 ORTHO05D002098 1.3e-06 57.0 86 45.3
Duzib138G1248 Durio zibethinus HOM05D002060 ORTHO05D002098 1.7e-06 56.6 50 62.0
Glyma.11G213500 Glycine max HOM05D002060 ORTHO05D002098 2.2e-06 56.2 111 40.5
Manes.02G079900 Manihot esculenta HOM05D002060 ORTHO05D002098 2.9e-06 55.8 53 58.5
Gohir.A08G038800 Gossypium hirsutum HOM05D002060 ORTHO05D002098 3.8e-06 55.5 50 60.0
Gohir.D08G049000 Gossypium hirsutum HOM05D002060 ORTHO05D002098 5.0e-06 55.1 47 63.8
Potri.017G144061 Populus trichocarpa HOM05D002060 ORTHO05D002098 5.0e-06 55.1 87 49.4


User provided reference genes

Program Settings