Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G37470 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 0.0e+00 1235.7 630 100.0
AL7G46160 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.3e-298 1029.2 632 84.3
Carub.0007s3260 Capsella rubella HOM05D007773 ORTHO05D010097 9.6e-262 906.7 613 74.2
AT5G37460 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 8.5e-242 840.5 623 70.9
AL7G46150 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.3e-237 826.6 621 71.0
CARHR215610 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.3e-231 805.8 607 68.0
Carub.0007s3259 Capsella rubella HOM05D007773 ORTHO05D010097 2.8e-229 798.9 616 66.9
CARHR215570 Cardamine hirsuta HOM05D007773 ORTHO05D010097 8.5e-218 760.8 603 66.3
CARHR215560 Cardamine hirsuta HOM05D007773 ORTHO05D010097 4.5e-211 738.4 599 64.8
CARHR215200 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.1e-200 703.0 610 61.8
Carub.0007s3255 Capsella rubella HOM05D007773 ORTHO05D010097 1.3e-194 683.7 621 59.7
AL7G46050 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.3e-189 667.2 619 60.4
Thhalv10027691m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 3.7e-189 665.6 601 58.4
AT5G37920 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.3e-186 657.1 619 59.0
AL7G46040 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 8.6e-186 654.4 621 58.5
AT5G37410 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.8e-184 649.4 616 57.5
Thhalv10027695m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 8.1e-184 647.9 603 59.5
Carub.0007s3702 Capsella rubella HOM05D007773 ORTHO05D010097 5.8e-182 641.7 614 58.1
CARHR215640 Cardamine hirsuta HOM05D007773 ORTHO05D010097 9.8e-182 641.0 617 57.4
Sp7g04910 Schrenkiella parvula HOM05D007773 ORTHO05D010097 5.4e-180 635.2 592 57.8
CARHR215650 Cardamine hirsuta HOM05D007773 ORTHO05D010097 7.3e-177 624.8 610 57.4
Carub.0007s3254 Capsella rubella HOM05D007773 ORTHO05D010097 5.4e-172 608.6 619 56.5
CARHR215620 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.2e-171 607.4 568 59.5
A04p10560 Brassica napus HOM05D007773 ORTHO05D010097 6.6e-170 601.7 608 55.4
C04p44190 Brassica napus HOM05D007773 ORTHO05D010097 5.6e-169 598.6 608 55.1
BcaC02g09565 Brassica carinata HOM05D007773 ORTHO05D010097 2.1e-168 596.7 608 55.1
BolC4t25994H Brassica oleracea HOM05D007773 ORTHO05D010097 2.8e-168 596.3 608 54.9
AT4G16530 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.1e-167 594.3 582 58.8
BcaB06g27065 Brassica carinata HOM05D007773 ORTHO05D010097 7.6e-166 588.2 597 54.8
CARHR215670 Cardamine hirsuta HOM05D007773 ORTHO05D010097 9.9e-166 587.8 618 54.0
BraA02t05642Z Brassica rapa HOM05D007773 ORTHO05D010097 7.1e-164 581.6 611 54.5
BNapus_Darmor_BZH_scaffold_38p00830 Brassica napus HOM05D007773 ORTHO05D010097 1.6e-163 580.5 611 54.3
AL7G46410 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 4.6e-163 578.9 613 50.9
Sp7g04850 Schrenkiella parvula HOM05D007773 ORTHO05D010097 1.9e-161 573.5 619 51.7
BolC3t19574H Brassica oleracea HOM05D007773 ORTHO05D010097 3.3e-161 572.8 605 51.1
BcaC02g09567 Brassica carinata HOM05D007773 ORTHO05D010097 8.1e-160 568.2 600 54.5
C04p44210 Brassica napus HOM05D007773 ORTHO05D010097 8.1e-160 568.2 600 54.5
BraA08t34655Z Brassica rapa HOM05D007773 ORTHO05D010097 1.1e-159 567.8 605 51.6
AL7G46030 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.4e-159 567.4 642 50.6
A08p27100 Brassica napus HOM05D007773 ORTHO05D010097 3.1e-159 566.2 605 51.4
BolC4t25995H Brassica oleracea HOM05D007773 ORTHO05D010097 4.0e-159 565.8 600 54.3
BraA04t16721Z Brassica rapa HOM05D007773 ORTHO05D010097 5.3e-159 565.5 663 49.6
BcaB06g27068 Brassica carinata HOM05D007773 ORTHO05D010097 6.9e-159 565.1 594 54.5
A04p10570 Brassica napus HOM05D007773 ORTHO05D010097 3.4e-158 562.8 593 54.5
AT5G37430 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 7.6e-158 561.6 625 51.5
C03p72760 Brassica napus HOM05D007773 ORTHO05D010097 2.9e-157 559.7 605 50.4
CARHR215220 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.9e-157 559.7 620 49.5
BcaB02g07854 Brassica carinata HOM05D007773 ORTHO05D010097 3.2e-156 556.2 620 51.1
Thhalv10001931m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 2.3e-154 550.1 633 49.3
AT5G37400 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.3e-153 546.2 618 51.5
Aa31sc146G30 Aethionema arabicum HOM05D007773 ORTHO05D010097 4.5e-150 535.8 583 49.7
AT5G37650 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.3e-149 534.3 610 49.2
BcaB03g12081 Brassica carinata HOM05D007773 ORTHO05D010097 1.7e-149 533.9 607 49.8
C03p93320 Brassica napus HOM05D007773 ORTHO05D010097 1.1e-148 531.2 612 50.5
A08p00180 Brassica napus HOM05D007773 ORTHO05D010097 9.3e-148 528.1 614 49.2
Sp7g04470 Schrenkiella parvula HOM05D007773 ORTHO05D010097 2.1e-147 526.9 617 49.1
BolC3t21630H Brassica oleracea HOM05D007773 ORTHO05D010097 4.6e-147 525.8 611 50.4
BraA08t32075Z Brassica rapa HOM05D007773 ORTHO05D010097 1.9e-145 520.4 614 48.7
Carub.0007s3252 Capsella rubella HOM05D007773 ORTHO05D010097 4.3e-145 519.2 629 47.9
AT5G37420 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 5.6e-145 518.8 620 50.8
Carub.0007s3280 Capsella rubella HOM05D007773 ORTHO05D010097 1.8e-143 513.8 611 47.5
Aa31LG4G11940 Aethionema arabicum HOM05D007773 ORTHO05D010097 7.6e-142 508.4 613 46.7
Sp4g15990 Schrenkiella parvula HOM05D007773 ORTHO05D010097 1.3e-128 464.5 596 47.7
AL7G38360 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.8e-127 460.7 390 65.4
AL7G38390 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.8e-127 460.7 390 65.4
Thhalv10027424m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 5.9e-126 455.7 599 47.4
Thhalv10017892m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 6.5e-125 452.2 591 46.7
BcaB05g24027 Brassica carinata HOM05D007773 ORTHO05D010097 4.8e-120 436.0 584 45.9
BcaC02g09561 Brassica carinata HOM05D007773 ORTHO05D010097 4.7e-99 366.3 434 49.3
BcaC02g09563 Brassica carinata HOM05D007773 ORTHO05D010097 5.7e-89 332.8 384 50.0
BcaC01g01702 Brassica carinata HOM05D007773 ORTHO05D010097 1.3e-88 331.6 414 45.9
AT4G09440 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.2e-80 304.3 175 88.0
Sp7g01300 Schrenkiella parvula HOM05D007773 ORTHO05D010097 5.9e-78 296.2 309 54.7
THA.LOC104805981 Tarenaya hassleriana HOM05D007773 ORTHO05D010097 1.6e-75 288.1 633 32.5
AL2G23630 Arabidopsis lyrata HOM05D007773 ORTHO05D018431 2.5e-36 157.9 301 34.9
AT1G66060 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 2.5e-36 157.9 293 34.1
AT1G66000 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 2.4e-34 151.4 291 33.3
CARHR057940 Cardamine hirsuta HOM05D007773 ORTHO05D018431 1.4e-31 142.1 217 37.8
THA.LOC104805980 Tarenaya hassleriana HOM05D002675 ORTHO05D003322 6.2e-27 126.7 175 41.7
THA.LOC104805644 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 3.1e-26 124.4 158 44.3
BcaC08g44269 Brassica carinata HOM05D000001 ORTHO05D000003 2.6e-25 121.3 84 73.8
BcaC02g09564 Brassica carinata HOM05D007773 ORTHO05D010097 1.3e-24 119.0 100 61.0
BcaC04g23658 Brassica carinata HOM05D007773 ORTHO05D010097 2.2e-24 118.2 101 54.5
BcaC02g09562 Brassica carinata HOM05D007773 ORTHO05D010097 7.9e-22 109.8 89 62.9
BolC2t07141H Brassica oleracea HOM05D007773 ORTHO05D043183 2.3e-21 108.2 98 56.1
THA.LOC104805640 Tarenaya hassleriana HOM05D012346 ORTHO05D014859 4.3e-20 104.0 434 25.1
AL2G23620 Arabidopsis lyrata HOM05D018003 ORTHO05D018431 2.5e-15 88.2 157 38.9
AL2G23710 Arabidopsis lyrata HOM05D012346 ORTHO05D014859 4.2e-15 87.4 263 30.0
Sp5g21170 Schrenkiella parvula HOM05D012346 ORTHO05D014859 7.2e-15 86.7 267 30.7
BcaC08g46079 Brassica carinata HOM05D012346 ORTHO05D014859 1.2e-14 85.9 257 31.1
C06p39380 Brassica napus HOM05D012346 ORTHO05D014859 1.6e-14 85.5 257 31.1
A07p33120 Brassica napus HOM05D012346 ORTHO05D014859 3.6e-14 84.3 306 28.1
BolC6t39031H Brassica oleracea HOM05D012346 ORTHO05D014859 7.9e-14 83.2 302 28.8
BcaB03g15294 Brassica carinata HOM05D012346 ORTHO05D014859 1.0e-13 82.8 244 31.1
BraA07t30940Z Brassica rapa HOM05D012346 ORTHO05D014859 8.7e-13 79.7 306 27.5
THA.LOC104825402 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 1.1e-12 79.3 101 45.5
AT2G03010 Arabidopsis thaliana HOM05D007773 ORTHO05D008084 5.7e-12 77.0 164 32.3
CARHR215680 Cardamine hirsuta HOM05D007773 ORTHO05D043183 9.7e-12 76.3 80 51.2
AT1G66110 Arabidopsis thaliana HOM05D012346 ORTHO05D014859 2.2e-11 75.1 263 29.3
CARHR058090 Cardamine hirsuta HOM05D012346 ORTHO05D014859 1.1e-10 72.8 306 26.5
THA.LOC109116331 Tarenaya hassleriana HOM05D007773 ORTHO05D406984 9.1e-10 69.7 147 29.9
Cfa007774 Carpinus fangiana HOM05D000846 ORTHO05D001340 5.9e-09 67.0 316 25.0
Haze_14298 Corylus avellana HOM05D000846 ORTHO05D001340 7.7e-09 66.6 287 24.0
Thhalv10019694m.g Eutrema salsugineum HOM05D012346 ORTHO05D014859 2.2e-08 65.1 123 33.3
CARHR057960 Cardamine hirsuta HOM05D007773 ORTHO05D018431 3.2e-07 61.2 85 36.5


User provided reference genes

Program Settings