Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G37430 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 0.0e+00 1099.0 557 100.0
AT5G37920 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 5.7e-235 817.8 609 71.8
AT5G37410 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 9.4e-206 720.7 619 63.7
Carub.0007s3255 Capsella rubella HOM05D007773 ORTHO05D010097 1.4e-201 706.8 611 62.8
AL7G46040 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 7.2e-198 694.5 617 61.3
AL7G46050 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 3.7e-186 655.6 619 59.5
Carub.0007s3702 Capsella rubella HOM05D007773 ORTHO05D010097 5.2e-180 635.2 609 57.8
AT4G16530 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 9.2e-177 624.4 580 60.5
Carub.0007s3254 Capsella rubella HOM05D007773 ORTHO05D010097 4.7e-165 585.5 623 55.5
CARHR215640 Cardamine hirsuta HOM05D007773 ORTHO05D010097 5.2e-164 582.0 610 54.4
CARHR215610 Cardamine hirsuta HOM05D007773 ORTHO05D010097 8.9e-164 581.3 615 52.4
CARHR215200 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.2e-163 580.9 606 54.1
CARHR215650 Cardamine hirsuta HOM05D007773 ORTHO05D010097 3.0e-159 566.2 590 54.4
AT5G37470 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 5.1e-159 565.5 625 51.5
AT5G37460 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.1e-158 564.3 632 51.6
Carub.0007s3259 Capsella rubella HOM05D007773 ORTHO05D010097 7.3e-158 561.6 622 51.6
Carub.0007s3260 Capsella rubella HOM05D007773 ORTHO05D010097 9.6e-158 561.2 622 50.6
AL7G46160 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.1e-157 560.1 627 51.0
AL7G46150 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.2e-154 550.1 626 51.9
CARHR215560 Cardamine hirsuta HOM05D007773 ORTHO05D010097 6.0e-152 542.0 589 51.3
CARHR215570 Cardamine hirsuta HOM05D007773 ORTHO05D010097 3.4e-147 526.2 604 49.3
AT5G37420 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.9e-145 520.4 574 54.2
CARHR215620 Cardamine hirsuta HOM05D007773 ORTHO05D010097 3.5e-144 516.2 570 52.6
Thhalv10027695m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 9.9e-139 498.0 606 49.2
Thhalv10027691m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 5.1e-135 485.7 604 47.2
Sp7g04850 Schrenkiella parvula HOM05D007773 ORTHO05D010097 9.6e-134 481.5 615 46.7
Sp7g04910 Schrenkiella parvula HOM05D007773 ORTHO05D010097 1.1e-129 468.0 599 46.2
CARHR215220 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.4e-129 467.6 626 44.9
C04p44190 Brassica napus HOM05D007773 ORTHO05D010097 1.6e-128 464.2 612 46.1
AL7G46410 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 3.5e-128 463.0 621 44.8
BcaC02g09565 Brassica carinata HOM05D007773 ORTHO05D010097 3.5e-128 463.0 612 46.1
BcaC02g09567 Brassica carinata HOM05D007773 ORTHO05D010097 1.0e-127 461.5 594 46.3
C04p44210 Brassica napus HOM05D007773 ORTHO05D010097 1.0e-127 461.5 594 46.3
BolC3t19574H Brassica oleracea HOM05D007773 ORTHO05D010097 1.0e-127 461.5 608 44.1
BraA02t05642Z Brassica rapa HOM05D007773 ORTHO05D010097 1.8e-127 460.7 610 45.4
A04p10570 Brassica napus HOM05D007773 ORTHO05D010097 2.3e-127 460.3 588 45.7
BolC4t25995H Brassica oleracea HOM05D007773 ORTHO05D010097 2.3e-127 460.3 594 46.1
BNapus_Darmor_BZH_scaffold_38p00830 Brassica napus HOM05D007773 ORTHO05D010097 5.1e-127 459.1 610 45.2
BraA08t34655Z Brassica rapa HOM05D007773 ORTHO05D010097 1.5e-126 457.6 609 44.0
A04p10560 Brassica napus HOM05D007773 ORTHO05D010097 1.9e-126 457.2 609 45.3
BolC4t25994H Brassica oleracea HOM05D007773 ORTHO05D010097 2.5e-126 456.8 610 45.9
A08p27100 Brassica napus HOM05D007773 ORTHO05D010097 4.3e-126 456.1 609 43.8
C03p72760 Brassica napus HOM05D007773 ORTHO05D010097 1.6e-125 454.1 608 43.3
BcaB02g07854 Brassica carinata HOM05D007773 ORTHO05D010097 9.0e-124 448.4 615 45.2
BcaB03g12081 Brassica carinata HOM05D007773 ORTHO05D010097 1.2e-123 448.0 596 44.1
BcaB06g27065 Brassica carinata HOM05D007773 ORTHO05D010097 5.9e-123 445.7 594 44.6
Thhalv10001931m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.0e-122 444.9 627 42.7
AT5G37650 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.4e-121 441.0 616 44.2
BraA04t16721Z Brassica rapa HOM05D007773 ORTHO05D010097 3.0e-119 433.3 667 41.1
BolC3t21630H Brassica oleracea HOM05D007773 ORTHO05D010097 1.5e-118 431.0 612 45.3
C03p93320 Brassica napus HOM05D007773 ORTHO05D010097 1.9e-118 430.6 613 45.4
Aa31sc146G30 Aethionema arabicum HOM05D007773 ORTHO05D010097 4.3e-118 429.5 596 41.6
AL7G38360 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 4.8e-117 426.0 391 60.6
AL7G38390 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 4.8e-117 426.0 391 60.6
A08p00180 Brassica napus HOM05D007773 ORTHO05D010097 1.4e-116 424.5 617 44.2
Sp7g04470 Schrenkiella parvula HOM05D007773 ORTHO05D010097 5.3e-116 422.5 625 41.8
BcaB06g27068 Brassica carinata HOM05D007773 ORTHO05D010097 2.0e-115 420.6 594 43.9
BraA08t32075Z Brassica rapa HOM05D007773 ORTHO05D010097 2.0e-115 420.6 617 44.1
CARHR215670 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.6e-115 420.2 622 42.3
AL7G46030 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 7.9e-112 408.7 642 40.3
Aa31LG4G11940 Aethionema arabicum HOM05D007773 ORTHO05D010097 5.9e-107 392.5 600 40.5
Carub.0007s3280 Capsella rubella HOM05D007773 ORTHO05D010097 2.5e-105 387.1 615 41.0
AT5G37400 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 5.5e-105 386.0 617 40.2
Sp4g15990 Schrenkiella parvula HOM05D007773 ORTHO05D010097 1.3e-101 374.8 592 40.4
Carub.0007s3252 Capsella rubella HOM05D007773 ORTHO05D010097 2.8e-101 373.6 632 37.2
BcaB05g24027 Brassica carinata HOM05D007773 ORTHO05D010097 1.8e-95 354.4 579 39.4
Thhalv10017892m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 3.0e-95 353.6 583 40.3
Thhalv10027424m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 2.6e-94 350.5 592 39.9
BcaC02g09561 Brassica carinata HOM05D007773 ORTHO05D010097 1.2e-88 331.6 405 49.1
BcaC01g01702 Brassica carinata HOM05D007773 ORTHO05D010097 3.8e-82 310.1 426 43.7
BcaC02g09563 Brassica carinata HOM05D007773 ORTHO05D010097 1.5e-81 308.1 389 47.6
Sp7g01300 Schrenkiella parvula HOM05D007773 ORTHO05D010097 2.7e-67 260.8 307 49.5
THA.LOC104805981 Tarenaya hassleriana HOM05D007773 ORTHO05D010097 1.9e-52 211.5 637 27.6
AT4G09440 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.8e-29 134.0 175 46.3
AT2G03010 Arabidopsis thaliana HOM05D007773 ORTHO05D008084 3.2e-28 131.0 162 48.1
BcaC08g44269 Brassica carinata HOM05D000001 ORTHO05D000003 1.9e-25 121.7 81 76.5
BcaC02g09564 Brassica carinata HOM05D007773 ORTHO05D010097 2.1e-24 118.2 94 61.7
AT1G66060 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 9.0e-23 112.8 252 29.8
BcaC02g09562 Brassica carinata HOM05D007773 ORTHO05D010097 2.0e-22 111.7 89 60.7
AT1G66000 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 9.9e-22 109.4 252 29.8
CARHR057940 Cardamine hirsuta HOM05D007773 ORTHO05D018431 1.2e-19 102.4 207 30.4
AL2G23630 Arabidopsis lyrata HOM05D007773 ORTHO05D018431 3.5e-19 100.9 267 27.7
THA.LOC104805980 Tarenaya hassleriana HOM05D002675 ORTHO05D003322 2.8e-16 91.3 172 33.1
THA.LOC104805644 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 8.2e-16 89.7 96 44.8
AT1G66110 Arabidopsis thaliana HOM05D012346 ORTHO05D014859 2.6e-14 84.7 310 28.7
BcaC04g23658 Brassica carinata HOM05D007773 ORTHO05D010097 5.8e-14 83.6 84 50.0
A07p33120 Brassica napus HOM05D012346 ORTHO05D014859 1.0e-13 82.8 324 29.0
AL2G23710 Arabidopsis lyrata HOM05D012346 ORTHO05D014859 2.9e-13 81.3 317 27.4
Sp5g21170 Schrenkiella parvula HOM05D012346 ORTHO05D014859 4.9e-13 80.5 324 26.2
BcaB03g15294 Brassica carinata HOM05D012346 ORTHO05D014859 2.5e-12 78.2 318 28.0
BraA07t30940Z Brassica rapa HOM05D012346 ORTHO05D014859 2.5e-12 78.2 324 28.1
THA.LOC109116331 Tarenaya hassleriana HOM05D007773 ORTHO05D406984 3.2e-12 77.8 115 38.3
BolC2t07141H Brassica oleracea HOM05D007773 ORTHO05D043183 1.2e-11 75.9 96 41.7
BcaC08g46079 Brassica carinata HOM05D012346 ORTHO05D014859 2.1e-11 75.1 324 27.8
BolC6t39031H Brassica oleracea HOM05D012346 ORTHO05D014859 2.1e-11 75.1 324 27.8
Carub.0002s1208 Capsella rubella HOM05D012346 ORTHO05D014859 2.7e-11 74.7 308 29.5
THA.LOC104805640 Tarenaya hassleriana HOM05D012346 ORTHO05D014859 2.7e-11 74.7 82 45.1
CARHR058090 Cardamine hirsuta HOM05D012346 ORTHO05D014859 3.5e-11 74.3 327 27.8
C06p39380 Brassica napus HOM05D012346 ORTHO05D014859 1.0e-10 72.8 327 27.8
Cfa007774 Carpinus fangiana HOM05D000846 ORTHO05D001340 1.9e-09 68.6 311 24.4
CARHR057960 Cardamine hirsuta HOM05D007773 ORTHO05D018431 5.9e-06 57.0 85 37.6


User provided reference genes

Program Settings