Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G37420 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.7e-310 1068.5 551 100.0
AL7G46050 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 4.6e-234 814.7 614 72.8
AT5G37410 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.6e-186 655.6 614 60.7
AL7G46040 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 7.4e-184 647.9 612 61.6
Carub.0007s3702 Capsella rubella HOM05D007773 ORTHO05D010097 4.2e-179 632.1 610 59.8
AT4G16530 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 4.1e-166 589.0 574 60.3
Carub.0007s3254 Capsella rubella HOM05D007773 ORTHO05D010097 2.1e-162 576.6 618 56.1
Carub.0007s3255 Capsella rubella HOM05D007773 ORTHO05D010097 5.2e-161 572.0 613 55.5
AT5G37920 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 4.8e-159 565.5 604 55.5
CARHR215200 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.7e-157 559.7 608 54.4
CARHR215640 Cardamine hirsuta HOM05D007773 ORTHO05D010097 4.7e-154 548.9 616 53.6
AT5G37460 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.7e-151 540.4 631 51.0
Carub.0007s3259 Capsella rubella HOM05D007773 ORTHO05D010097 1.8e-150 537.0 623 51.5
AL7G46150 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.9e-148 529.6 619 52.2
Carub.0007s3260 Capsella rubella HOM05D007773 ORTHO05D010097 2.6e-144 516.5 624 49.7
AT5G37470 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.4e-144 516.2 620 50.8
AT5G37430 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 6.3e-143 511.9 574 54.2
AL7G46160 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 5.9e-141 505.4 625 49.6
CARHR215650 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.5e-139 500.0 598 50.5
CARHR215610 Cardamine hirsuta HOM05D007773 ORTHO05D010097 8.0e-138 495.0 613 48.9
CARHR215620 Cardamine hirsuta HOM05D007773 ORTHO05D010097 5.4e-134 482.3 575 51.1
CARHR215560 Cardamine hirsuta HOM05D007773 ORTHO05D010097 5.2e-129 465.7 592 49.0
CARHR215570 Cardamine hirsuta HOM05D007773 ORTHO05D010097 4.9e-127 459.1 606 48.7
Thhalv10027691m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 3.1e-121 439.9 595 45.4
Thhalv10027695m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 2.9e-119 433.3 602 46.8
BraA02t05642Z Brassica rapa HOM05D007773 ORTHO05D010097 5.8e-112 409.1 612 44.1
Sp7g04910 Schrenkiella parvula HOM05D007773 ORTHO05D010097 1.3e-111 407.9 600 42.8
BNapus_Darmor_BZH_scaffold_38p00830 Brassica napus HOM05D007773 ORTHO05D010097 1.7e-111 407.5 612 44.0
AL7G38360 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.2e-111 407.1 393 60.8
AL7G38390 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 2.2e-111 407.1 393 60.8
Sp7g04850 Schrenkiella parvula HOM05D007773 ORTHO05D010097 6.4e-111 405.6 619 43.1
CARHR215220 Cardamine hirsuta HOM05D007773 ORTHO05D010097 3.2e-110 403.3 628 41.6
A08p00180 Brassica napus HOM05D007773 ORTHO05D010097 9.3e-110 401.7 609 42.7
BraA08t32075Z Brassica rapa HOM05D007773 ORTHO05D010097 1.0e-108 398.3 609 42.2
BcaB02g07854 Brassica carinata HOM05D007773 ORTHO05D010097 3.0e-108 396.7 616 43.7
AL7G46410 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 5.1e-108 396.0 626 41.7
BcaB06g27065 Brassica carinata HOM05D007773 ORTHO05D010097 1.9e-107 394.0 591 43.1
BolC3t21630H Brassica oleracea HOM05D007773 ORTHO05D010097 2.5e-107 393.7 606 42.7
C03p93320 Brassica napus HOM05D007773 ORTHO05D010097 7.3e-107 392.1 607 42.5
A04p10560 Brassica napus HOM05D007773 ORTHO05D010097 9.6e-107 391.7 608 42.1
C04p44190 Brassica napus HOM05D007773 ORTHO05D010097 9.6e-107 391.7 608 42.4
BcaC02g09565 Brassica carinata HOM05D007773 ORTHO05D010097 2.1e-106 390.6 608 42.3
BolC4t25994H Brassica oleracea HOM05D007773 ORTHO05D010097 4.0e-105 386.3 607 42.3
AT5G37650 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.6e-104 383.6 615 41.5
Aa31sc146G30 Aethionema arabicum HOM05D007773 ORTHO05D010097 9.9e-104 381.7 591 40.9
BolC4t25995H Brassica oleracea HOM05D007773 ORTHO05D010097 1.7e-103 380.9 599 41.9
BcaC02g09567 Brassica carinata HOM05D007773 ORTHO05D010097 2.9e-103 380.2 599 41.9
C04p44210 Brassica napus HOM05D007773 ORTHO05D010097 2.9e-103 380.2 599 41.9
CARHR215670 Cardamine hirsuta HOM05D007773 ORTHO05D010097 9.3e-102 375.2 622 41.5
BraA04t16721Z Brassica rapa HOM05D007773 ORTHO05D010097 4.6e-101 372.9 660 38.6
A04p10570 Brassica napus HOM05D007773 ORTHO05D010097 6.0e-101 372.5 598 41.1
AL7G46030 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.0e-100 371.7 642 40.0
BcaB06g27068 Brassica carinata HOM05D007773 ORTHO05D010097 2.3e-100 370.5 599 41.6
BcaB03g12081 Brassica carinata HOM05D007773 ORTHO05D010097 6.6e-100 369.0 600 40.2
BolC3t19574H Brassica oleracea HOM05D007773 ORTHO05D010097 7.3e-99 365.5 606 39.3
Aa31LG4G11940 Aethionema arabicum HOM05D007773 ORTHO05D010097 8.1e-98 362.1 593 40.0
BraA08t34655Z Brassica rapa HOM05D007773 ORTHO05D010097 8.1e-98 362.1 606 39.4
A08p27100 Brassica napus HOM05D007773 ORTHO05D010097 2.4e-97 360.5 606 39.3
C03p72760 Brassica napus HOM05D007773 ORTHO05D010097 1.2e-96 358.2 606 38.8
AT5G37400 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.5e-96 357.8 618 40.8
Thhalv10001931m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.1e-94 351.7 627 39.2
Sp7g04470 Schrenkiella parvula HOM05D007773 ORTHO05D010097 6.0e-93 345.9 625 38.9
Carub.0007s3252 Capsella rubella HOM05D007773 ORTHO05D010097 1.3e-92 344.7 621 38.3
Carub.0007s3280 Capsella rubella HOM05D007773 ORTHO05D010097 2.0e-88 330.9 620 38.2
Thhalv10027424m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 1.9e-83 314.3 594 38.0
Sp4g15990 Schrenkiella parvula HOM05D007773 ORTHO05D010097 9.0e-81 305.4 582 37.5
BcaB05g24027 Brassica carinata HOM05D007773 ORTHO05D010097 2.6e-80 303.9 586 37.5
Thhalv10017892m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 2.1e-77 294.3 587 36.1
BcaC01g01702 Brassica carinata HOM05D007773 ORTHO05D010097 3.3e-59 233.8 408 37.7
BcaC02g09561 Brassica carinata HOM05D007773 ORTHO05D010097 4.4e-59 233.4 344 43.3
BcaC02g09563 Brassica carinata HOM05D007773 ORTHO05D010097 4.4e-59 233.4 344 43.3
Sp7g01300 Schrenkiella parvula HOM05D007773 ORTHO05D010097 3.7e-58 230.3 311 46.6
THA.LOC104805981 Tarenaya hassleriana HOM05D007773 ORTHO05D010097 1.8e-44 184.9 644 28.9
BcaC02g09564 Brassica carinata HOM05D007773 ORTHO05D010097 1.1e-25 122.5 99 65.7
BcaC08g44269 Brassica carinata HOM05D000001 ORTHO05D000003 3.2e-25 120.9 86 75.6
AT2G03010 Arabidopsis thaliana HOM05D007773 ORTHO05D008084 1.2e-24 119.0 314 32.8
AT4G09440 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 4.6e-24 117.1 85 71.8
BcaC02g09562 Brassica carinata HOM05D007773 ORTHO05D010097 1.3e-23 115.5 91 67.0
THA.LOC104805980 Tarenaya hassleriana HOM05D002675 ORTHO05D003322 8.9e-20 102.8 164 39.6
THA.LOC104805644 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 1.3e-18 99.0 134 41.8
AT1G66110 Arabidopsis thaliana HOM05D012346 ORTHO05D014859 5.2e-12 77.0 252 32.5
CARHR058090 Cardamine hirsuta HOM05D012346 ORTHO05D014859 6.8e-12 76.6 301 28.9
A07p33120 Brassica napus HOM05D012346 ORTHO05D014859 2.9e-10 71.2 257 28.8
BraA07t30940Z Brassica rapa HOM05D012346 ORTHO05D014859 3.7e-10 70.9 257 28.8
AT1G66060 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 6.4e-10 70.1 254 26.8
AT1G66000 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 1.1e-09 69.3 254 26.0
AL2G23710 Arabidopsis lyrata HOM05D012346 ORTHO05D014859 1.4e-09 68.9 251 29.9
AL2G23630 Arabidopsis lyrata HOM05D007773 ORTHO05D018431 1.2e-08 65.9 298 25.8
BcaC08g46079 Brassica carinata HOM05D012346 ORTHO05D014859 2.1e-08 65.1 256 28.1
BolC6t39031H Brassica oleracea HOM05D012346 ORTHO05D014859 2.7e-08 64.7 256 28.1
C06p39380 Brassica napus HOM05D012346 ORTHO05D014859 3.5e-08 64.3 260 28.1
Sp5g21170 Schrenkiella parvula HOM05D012346 ORTHO05D014859 3.5e-08 64.3 317 27.8
Carub.0002s1208 Capsella rubella HOM05D012346 ORTHO05D014859 7.8e-08 63.2 312 27.2
THA.LOC104825402 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 2.3e-07 61.6 74 43.2
AL2G23620 Arabidopsis lyrata HOM05D018003 ORTHO05D018431 1.1e-06 59.3 149 32.2


User provided reference genes

Program Settings