Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G37410 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 0.0e+00 1226.5 626 100.0
AL7G46040 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.2e-296 1022.7 621 84.4
AT4G16530 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.3e-231 806.6 573 74.9
Carub.0007s3254 Capsella rubella HOM05D007773 ORTHO05D010097 8.2e-229 797.3 616 69.6
AL7G46050 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.8e-228 796.2 618 68.9
AT5G37920 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.4e-227 792.0 614 68.6
Carub.0007s3702 Capsella rubella HOM05D007773 ORTHO05D010097 4.5e-227 791.6 608 68.4
Carub.0007s3255 Capsella rubella HOM05D007773 ORTHO05D010097 2.2e-210 736.1 616 64.4
AT5G37430 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 9.1e-204 714.1 619 63.7
CARHR215200 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.6e-203 712.6 601 63.2
CARHR215640 Cardamine hirsuta HOM05D007773 ORTHO05D010097 5.0e-194 681.8 611 61.0
Carub.0007s3259 Capsella rubella HOM05D007773 ORTHO05D010097 9.8e-190 667.5 616 57.8
AL7G46150 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 7.0e-188 661.4 620 58.5
AT5G37420 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 3.5e-187 659.1 614 60.7
AT5G37460 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 2.2e-186 656.4 627 56.6
CARHR215610 Cardamine hirsuta HOM05D007773 ORTHO05D010097 3.8e-186 655.6 615 57.7
AT5G37470 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 4.7e-184 648.7 616 57.5
Carub.0007s3260 Capsella rubella HOM05D007773 ORTHO05D010097 2.6e-182 642.9 618 56.5
AL7G46160 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.1e-180 637.5 623 56.3
CARHR215650 Cardamine hirsuta HOM05D007773 ORTHO05D010097 3.8e-178 629.0 593 58.2
CARHR215560 Cardamine hirsuta HOM05D007773 ORTHO05D010097 6.8e-175 618.2 594 57.9
CARHR215620 Cardamine hirsuta HOM05D007773 ORTHO05D010097 4.1e-172 609.0 565 59.5
Thhalv10027695m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 2.0e-166 590.1 603 55.4
CARHR215570 Cardamine hirsuta HOM05D007773 ORTHO05D010097 1.3e-165 587.4 606 55.3
AL7G38360 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 3.9e-162 575.9 391 76.0
AL7G38390 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 3.9e-162 575.9 391 76.0
Thhalv10027691m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 2.1e-160 570.1 606 52.5
Sp7g04910 Schrenkiella parvula HOM05D007773 ORTHO05D010097 4.0e-159 565.8 598 53.3
Sp7g04850 Schrenkiella parvula HOM05D007773 ORTHO05D010097 4.9e-157 558.9 621 52.2
C04p44190 Brassica napus HOM05D007773 ORTHO05D010097 4.3e-153 545.8 614 52.4
BcaC02g09565 Brassica carinata HOM05D007773 ORTHO05D010097 2.1e-152 543.5 614 52.4
BolC4t25994H Brassica oleracea HOM05D007773 ORTHO05D010097 1.1e-151 541.2 613 52.2
BraA02t05642Z Brassica rapa HOM05D007773 ORTHO05D010097 1.1e-151 541.2 614 51.5
BNapus_Darmor_BZH_scaffold_38p00830 Brassica napus HOM05D007773 ORTHO05D010097 3.1e-151 539.7 614 51.3
A04p10560 Brassica napus HOM05D007773 ORTHO05D010097 6.8e-151 538.5 611 51.2
AL7G46410 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 3.4e-150 536.2 615 49.8
CARHR215220 Cardamine hirsuta HOM05D007773 ORTHO05D010097 2.2e-149 533.5 627 48.8
BolC3t19574H Brassica oleracea HOM05D007773 ORTHO05D010097 1.9e-148 530.4 607 48.1
BcaB06g27065 Brassica carinata HOM05D007773 ORTHO05D010097 2.4e-148 530.0 597 51.3
BcaB02g07854 Brassica carinata HOM05D007773 ORTHO05D010097 6.0e-147 525.4 621 50.1
Thhalv10001931m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 7.8e-147 525.0 626 48.7
C03p72760 Brassica napus HOM05D007773 ORTHO05D010097 6.6e-146 521.9 610 47.4
BraA08t34655Z Brassica rapa HOM05D007773 ORTHO05D010097 8.6e-146 521.5 608 47.7
A08p27100 Brassica napus HOM05D007773 ORTHO05D010097 1.5e-145 520.8 611 47.5
BolC4t25995H Brassica oleracea HOM05D007773 ORTHO05D010097 1.5e-145 520.8 595 50.6
CARHR215670 Cardamine hirsuta HOM05D007773 ORTHO05D010097 9.6e-145 518.1 631 47.7
A08p00180 Brassica napus HOM05D007773 ORTHO05D010097 8.1e-144 515.0 625 49.3
AT5G37650 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 5.2e-143 512.3 616 48.7
BcaC02g09567 Brassica carinata HOM05D007773 ORTHO05D010097 6.9e-143 511.9 603 49.4
C04p44210 Brassica napus HOM05D007773 ORTHO05D010097 6.9e-143 511.9 603 49.4
BcaB06g27068 Brassica carinata HOM05D007773 ORTHO05D010097 8.9e-143 511.5 594 50.0
BraA04t16721Z Brassica rapa HOM05D007773 ORTHO05D010097 2.6e-142 510.0 670 46.0
BraA08t32075Z Brassica rapa HOM05D007773 ORTHO05D010097 2.2e-141 506.9 625 48.8
A04p10570 Brassica napus HOM05D007773 ORTHO05D010097 4.9e-141 505.8 595 49.6
Aa31sc146G30 Aethionema arabicum HOM05D007773 ORTHO05D010097 5.4e-140 502.3 597 46.9
C03p93320 Brassica napus HOM05D007773 ORTHO05D010097 5.1e-138 495.7 623 48.5
BolC3t21630H Brassica oleracea HOM05D007773 ORTHO05D010097 6.6e-138 495.4 622 48.6
AL7G46030 Arabidopsis lyrata HOM05D007773 ORTHO05D010097 1.9e-137 493.8 656 45.3
BcaB03g12081 Brassica carinata HOM05D007773 ORTHO05D010097 3.1e-135 486.5 608 46.2
Sp7g04470 Schrenkiella parvula HOM05D007773 ORTHO05D010097 5.3e-135 485.7 622 46.5
AT5G37400 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 6.9e-135 485.3 632 45.9
Carub.0007s3280 Capsella rubella HOM05D007773 ORTHO05D010097 1.3e-130 471.1 612 45.9
Aa31LG4G11940 Aethionema arabicum HOM05D007773 ORTHO05D010097 1.8e-130 470.7 621 43.6
Carub.0007s3252 Capsella rubella HOM05D007773 ORTHO05D010097 2.0e-126 457.2 633 43.1
Sp4g15990 Schrenkiella parvula HOM05D007773 ORTHO05D010097 2.5e-121 440.3 599 45.4
BcaB05g24027 Brassica carinata HOM05D007773 ORTHO05D010097 6.9e-119 432.2 582 45.5
Thhalv10027424m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 2.0e-118 430.6 596 45.1
Thhalv10017892m.g Eutrema salsugineum HOM05D007773 ORTHO05D010097 8.7e-114 415.2 585 42.2
BcaC02g09561 Brassica carinata HOM05D007773 ORTHO05D010097 3.0e-90 337.0 412 51.5
BcaC02g09563 Brassica carinata HOM05D007773 ORTHO05D010097 1.2e-81 308.5 387 50.1
BcaC01g01702 Brassica carinata HOM05D007773 ORTHO05D010097 1.8e-79 301.2 426 42.3
THA.LOC104805981 Tarenaya hassleriana HOM05D007773 ORTHO05D010097 2.2e-72 277.7 639 31.9
Sp7g01300 Schrenkiella parvula HOM05D007773 ORTHO05D010097 4.5e-70 270.0 316 51.6
AT4G09440 Arabidopsis thaliana HOM05D007773 ORTHO05D010097 1.2e-51 208.8 175 61.7
AT1G66060 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 1.4e-42 178.7 295 38.3
AT1G66000 Arabidopsis thaliana HOM05D007773 ORTHO05D018431 5.8e-41 173.3 295 38.0
AL2G23630 Arabidopsis lyrata HOM05D007773 ORTHO05D018431 1.1e-36 159.1 303 34.3
AT2G03010 Arabidopsis thaliana HOM05D007773 ORTHO05D008084 2.1e-35 154.8 315 36.8
CARHR057940 Cardamine hirsuta HOM05D007773 ORTHO05D018431 1.7e-32 145.2 217 39.2
THA.LOC104805980 Tarenaya hassleriana HOM05D002675 ORTHO05D003322 4.7e-27 127.1 177 38.4
THA.LOC104805644 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 4.0e-26 124.0 160 40.0
BcaC08g44269 Brassica carinata HOM05D000001 ORTHO05D000003 5.8e-25 120.2 83 71.1
BcaC02g09564 Brassica carinata HOM05D007773 ORTHO05D010097 4.9e-24 117.1 96 61.5
BcaC02g09562 Brassica carinata HOM05D007773 ORTHO05D010097 7.8e-22 109.8 89 60.7
BcaC04g23658 Brassica carinata HOM05D007773 ORTHO05D010097 7.8e-22 109.8 99 54.5
THA.LOC104805640 Tarenaya hassleriana HOM05D012346 ORTHO05D014859 1.3e-13 82.4 719 20.7
Carub.0002s1208 Capsella rubella HOM05D012346 ORTHO05D014859 2.3e-13 81.6 310 30.3
THA.LOC104825402 Tarenaya hassleriana HOM05D007773 ORTHO05D018431 3.0e-13 81.3 102 42.2
THA.LOC109116331 Tarenaya hassleriana HOM05D007773 ORTHO05D406984 8.7e-13 79.7 154 35.7
AL2G23620 Arabidopsis lyrata HOM05D018003 ORTHO05D018431 1.1e-12 79.3 156 34.0
BolC2t07141H Brassica oleracea HOM05D007773 ORTHO05D043183 1.5e-12 79.0 100 43.0
BcaB03g15294 Brassica carinata HOM05D012346 ORTHO05D014859 2.4e-10 71.6 298 27.9
CARHR057960 Cardamine hirsuta HOM05D007773 ORTHO05D018431 2.7e-06 58.2 103 32.0
CARHR215680 Cardamine hirsuta HOM05D007773 ORTHO05D043183 4.6e-06 57.4 80 38.8


User provided reference genes

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