Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G35475 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 2.1e-88 328.9 162 100.0
THA.LOC104804542 Tarenaya hassleriana HOM05D001338 ORTHO05D001239 7.0e-31 137.9 167 44.3
Thhalv10017956m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 9.4e-28 127.5 181 43.6
AT2G06500 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 1.2e-27 127.1 190 40.5
PSO724G1135 Papaver somniferum HOM05D001338 ORTHO05D001239 5.2e-26 121.7 190 38.9
PSO063G5018 Papaver somniferum HOM05D001338 ORTHO05D001239 1.7e-24 116.7 213 36.2
TWI74G0957 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 3.1e-23 112.5 168 40.5
CSS0039736 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 5.3e-23 111.7 208 35.6
CSS0011720 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 3.5e-22 109.0 207 35.3
PSO782G2771 Papaver somniferum HOM05D001338 ORTHO05D001239 4.5e-22 108.6 154 44.2
CANSAT35G0728 Cannabis sativa HOM05D001338 ORTHO05D001239 1.3e-21 107.1 202 35.1
BolC1t04569H Brassica oleracea HOM05D001338 ORTHO05D001239 1.7e-21 106.7 190 36.3
Thhalv10016048m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 1.7e-21 106.7 168 39.3
TWI81G1066 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.9e-21 105.9 168 39.3
Thhalv10009736m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 3.8e-21 105.5 168 37.5
Thhalv10009558m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 6.5e-21 104.8 168 36.9
Oeu060590.1 Olea europaea HOM05D001338 ORTHO05D001239 6.5e-21 104.8 192 34.4
CiPaw.11G014600 Carya illinoinensis HOM05D001338 ORTHO05D001239 8.5e-21 104.4 139 42.4
Thhalv10001096m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 1.5e-20 103.6 168 38.1
PSO210G4276 Papaver somniferum HOM05D001338 ORTHO05D001239 3.2e-20 102.4 167 36.5
PSO384G4132 Papaver somniferum HOM05D001338 ORTHO05D001239 4.2e-20 102.1 167 35.9
BolC1t04570H Brassica oleracea HOM05D000012 ORTHO05D001652 5.5e-20 101.7 83 59.0
FvH4_1g26762 Fragaria vesca HOM05D001338 ORTHO05D001239 7.2e-20 101.3 85 57.6
Oeu064240.1 Olea europaea HOM05D001338 ORTHO05D001239 9.4e-20 100.9 113 44.2
PSO063G1472 Papaver somniferum HOM05D001338 ORTHO05D001239 9.4e-20 100.9 83 57.8
PSO675G8898 Papaver somniferum HOM05D001338 ORTHO05D001239 1.6e-19 100.1 142 42.3
PSO801G0680 Papaver somniferum HOM05D001338 ORTHO05D001239 1.6e-19 100.1 158 37.3
RcHm_v2.0_Chr1g0320361 Rosa chinensis HOM05D001338 ORTHO05D001239 1.6e-19 100.1 168 37.5
RcHm_v2.0_Chr7g0198811 Rosa chinensis HOM05D001338 ORTHO05D001239 1.6e-19 100.1 168 36.3
AT1G35150 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 3.6e-19 99.0 160 36.9
PSO170G1703 Papaver somniferum HOM05D001338 ORTHO05D001239 3.6e-19 99.0 162 37.0
PSO801G0833 Papaver somniferum HOM05D001338 ORTHO05D001239 3.6e-19 99.0 233 34.3
HanXRQChr10g0286761 Helianthus annuus HOM05D001338 ORTHO05D001239 4.7e-19 98.6 176 35.2
PSO210G0436 Papaver somniferum HOM05D001338 ORTHO05D001239 4.7e-19 98.6 167 36.5
PSO339G3643 Papaver somniferum HOM05D001338 ORTHO05D001239 4.7e-19 98.6 167 36.5
PSO541G0488 Papaver somniferum HOM05D001338 ORTHO05D001239 4.7e-19 98.6 167 36.5
TPR.G34669 Trifolium pratense HOM05D001338 ORTHO05D001239 1.0e-18 97.4 82 59.8
PSO541G2431 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-18 97.1 139 40.3
Zm00001eb077850 Zea mays HOM05D001338 ORTHO05D001239 1.4e-18 97.1 168 35.7
CANSAT56G4418 Cannabis sativa HOM05D001338 ORTHO05D001239 1.8e-18 96.7 168 36.3
PSO063G4296 Papaver somniferum HOM05D001338 ORTHO05D001239 1.8e-18 96.7 167 35.3
Gohir.D06G166250 Gossypium hirsutum HOM05D001338 ORTHO05D001239 2.3e-18 96.3 136 42.6
PSO063G3812 Papaver somniferum HOM05D001338 ORTHO05D001239 2.3e-18 96.3 170 35.9
PSO541G1638 Papaver somniferum HOM05D001338 ORTHO05D001239 2.3e-18 96.3 167 34.7
CANSAT21G0118 Cannabis sativa HOM05D001338 ORTHO05D001239 3.0e-18 95.9 168 34.5
CANSAT21G2437 Cannabis sativa HOM05D001338 ORTHO05D001239 3.0e-18 95.9 168 34.5
CARHR184750 Cardamine hirsuta HOM05D001338 ORTHO05D001239 4.0e-18 95.5 62 72.6
PSO104G0173 Papaver somniferum HOM05D001338 ORTHO05D001239 4.0e-18 95.5 162 35.8
PSO781G0024 Papaver somniferum HOM05D001338 ORTHO05D001239 4.0e-18 95.5 162 35.8
CANSAT54G1041 Cannabis sativa HOM05D001338 ORTHO05D001239 5.2e-18 95.1 159 37.7
Zm00001eb426040 Zea mays HOM05D001338 ORTHO05D001239 5.2e-18 95.1 83 55.4
CARHR048790 Cardamine hirsuta HOM05D001338 ORTHO05D001239 8.8e-18 94.4 159 37.1
FvH4_1g08761 Fragaria vesca HOM05D001338 ORTHO05D001239 1.2e-17 94.0 168 32.7
FvH4_5g30891 Fragaria vesca HOM05D001338 ORTHO05D001239 1.2e-17 94.0 168 32.7
CANSAT11G2147 Cannabis sativa HOM05D001338 ORTHO05D001239 1.5e-17 93.6 168 35.7
PSO781G0133 Papaver somniferum HOM05D001338 ORTHO05D001239 2.6e-17 92.8 140 38.6
SpUn0007_0210 Schrenkiella parvula HOM05D001338 ORTHO05D001239 2.6e-17 92.8 155 39.4
CANSAT64G2348 Cannabis sativa HOM05D001338 ORTHO05D001239 3.4e-17 92.4 158 36.7
Gohir.A06G101504 Gossypium hirsutum HOM05D001338 ORTHO05D001239 3.4e-17 92.4 149 37.6
MD01G1087700 Malus domestica HOM05D001113 ORTHO05D000968 3.4e-17 92.4 84 52.4
PSO384G4498 Papaver somniferum HOM05D001338 ORTHO05D001239 3.4e-17 92.4 167 34.7
Atru.chr2.1436 Acer truncatum HOM05D001338 ORTHO05D001239 4.4e-17 92.0 85 51.8
AUR62037832 Chenopodium quinoa HOM05D001338 ORTHO05D001239 4.4e-17 92.0 168 35.1
Oeu028129.1 Olea europaea HOM05D001338 ORTHO05D001239 4.4e-17 92.0 159 35.2
SpUn1024_0010 Schrenkiella parvula HOM05D001338 ORTHO05D001239 4.4e-17 92.0 102 49.0
CANSAT80G1793 Cannabis sativa HOM05D001338 ORTHO05D001239 5.7e-17 91.7 132 41.7
Oeu011673.1 Olea europaea HOM05D001338 ORTHO05D001239 5.7e-17 91.7 172 32.0
Oeu037760.1 Olea europaea HOM05D001338 ORTHO05D001239 5.7e-17 91.7 160 35.0
Atru.chr1.2432 Acer truncatum HOM05D001338 ORTHO05D001239 7.5e-17 91.3 153 37.9
Oeu008700.1 Olea europaea HOM05D001338 ORTHO05D001239 7.5e-17 91.3 258 26.7
TWI73G0975 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 7.5e-17 91.3 82 59.8
AT3G29794 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 9.8e-17 90.9 136 41.9
CARHR217440 Cardamine hirsuta HOM05D001338 ORTHO05D001239 9.8e-17 90.9 124 46.0
TPR.G17453 Trifolium pratense HOM05D001338 ORTHO05D001239 1.7e-16 90.1 168 34.5
Oeu042321.2 Olea europaea HOM05D001338 ORTHO05D001239 2.2e-16 89.7 159 33.3
PSO210G1522 Papaver somniferum HOM05D001338 ORTHO05D001239 2.2e-16 89.7 83 54.2
PSO724G1235 Papaver somniferum HOM05D001338 ORTHO05D001239 2.2e-16 89.7 83 54.2
CANSAT11G1935 Cannabis sativa HOM05D001338 ORTHO05D001239 2.8e-16 89.4 183 33.3
PSO017G0847 Papaver somniferum HOM05D001338 ORTHO05D001239 2.8e-16 89.4 83 54.2
AUR62026124 Chenopodium quinoa HOM05D001338 ORTHO05D001239 3.7e-16 89.0 168 33.3
Oeu012177.1 Olea europaea HOM05D001338 ORTHO05D001239 3.7e-16 89.0 158 33.5
Aqoxy7G02175 Aquilegia oxysepala HOM05D001338 ORTHO05D001239 6.3e-16 88.2 158 36.1
Oeu030195.1 Olea europaea HOM05D001338 ORTHO05D001239 6.3e-16 88.2 164 32.3
PSO386G0185 Papaver somniferum HOM05D001338 ORTHO05D001239 6.3e-16 88.2 83 55.4
CARHR257160 Cardamine hirsuta HOM05D001338 ORTHO05D001239 8.3e-16 87.8 154 39.0
Oeu056375.1 Olea europaea HOM05D001338 ORTHO05D001239 1.1e-15 87.4 159 34.0
PSO063G7197 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-15 87.4 162 33.3
FvH4_4g01531 Fragaria vesca HOM05D001338 ORTHO05D001239 1.4e-15 87.0 167 34.1
PSO764G0071 Papaver somniferum HOM05D001338 ORTHO05D001239 1.8e-15 86.7 162 33.3
TPR.G36571 Trifolium pratense HOM05D001338 ORTHO05D001239 2.4e-15 86.3 83 51.8
PSO421G0097 Papaver somniferum HOM05D001338 ORTHO05D001239 3.1e-15 85.9 75 57.3
CANSAT80G1592 Cannabis sativa HOM05D001338 ORTHO05D001239 4.1e-15 85.5 83 50.6
Oeu052557.1 Olea europaea HOM05D001338 ORTHO05D001239 4.1e-15 85.5 158 32.3
PSO478G0891 Papaver somniferum HOM05D001338 ORTHO05D001239 5.4e-15 85.1 78 53.8
PSO478G1760 Papaver somniferum HOM05D001338 ORTHO05D001239 5.4e-15 85.1 162 33.3
PSO541G2490 Papaver somniferum HOM05D001338 ORTHO05D001239 5.4e-15 85.1 78 53.8
HanXRQChr11g0321041 Helianthus annuus HOM05D001338 ORTHO05D001239 7.0e-15 84.7 168 29.8
Atru.chr12.2101 Acer truncatum HOM05D001338 ORTHO05D001239 1.2e-14 84.0 85 47.1
Oeu054866.1 Olea europaea HOM05D001338 ORTHO05D001239 1.6e-14 83.6 83 47.0
PSO210G5802 Papaver somniferum HOM05D001338 ORTHO05D001239 1.6e-14 83.6 172 33.1
Oeu032006.1 Olea europaea HOM05D001338 ORTHO05D001239 2.7e-14 82.8 90 42.2
Oeu039597.1 Olea europaea HOM05D001338 ORTHO05D001239 2.7e-14 82.8 83 45.8
Oeu016868.1 Olea europaea HOM05D001338 ORTHO05D001239 7.7e-14 81.3 83 44.6
PSO063G6584 Papaver somniferum HOM05D001338 ORTHO05D001239 7.7e-14 81.3 162 32.1
Oeu063768.1 Olea europaea HOM05D001338 ORTHO05D001239 6.5e-13 78.2 159 32.1
PSO832G4176 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-12 77.4 78 48.7
CSS0004687 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.9e-12 76.6 137 35.8
PSO170G2214 Papaver somniferum HOM05D001338 ORTHO05D001239 1.9e-12 76.6 78 48.7
PSO478G4662 Papaver somniferum HOM05D001338 ORTHO05D001239 1.9e-12 76.6 78 48.7
PSO541G4464 Papaver somniferum HOM05D001338 ORTHO05D001239 1.9e-12 76.6 159 32.7
Oeu055078.1 Olea europaea HOM05D001338 ORTHO05D001239 2.5e-12 76.3 138 34.1
TWI18G0851 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 5.5e-12 75.1 83 49.4
Glyma.14G107400 Glycine max HOM05D001338 ORTHO05D001239 7.2e-12 74.7 70 52.9
Oeu029248.1 Olea europaea HOM05D001338 ORTHO05D001239 7.2e-12 74.7 194 29.4
PSO761G0174 Papaver somniferum HOM05D001338 ORTHO05D001239 7.2e-12 74.7 119 38.7
CARHR217460 Cardamine hirsuta HOM05D001338 ORTHO05D001239 9.5e-12 74.3 127 38.6
TPR.G35432 Trifolium pratense HOM05D001338 ORTHO05D001239 9.5e-12 74.3 154 32.5
TWI31G1167 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.2e-11 73.9 122 38.5
TWI31G0800 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.6e-11 73.6 122 38.5
CSS0006650 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 2.1e-11 73.2 148 31.8
CSS0027088 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 2.1e-11 73.2 148 31.8
PSO138G0008 Papaver somniferum HOM05D001338 ORTHO05D001239 2.1e-11 73.2 167 30.5
Oeu018676.2 Olea europaea HOM05D001338 ORTHO05D001239 8.0e-11 71.2 138 31.9
PSO384G2104 Papaver somniferum HOM05D001338 ORTHO05D001239 8.0e-11 71.2 49 65.3
CANSAT54G1040 Cannabis sativa HOM05D001338 ORTHO05D001239 1.0e-10 70.9 137 35.0
CANSAT64G1081 Cannabis sativa HOM05D001338 ORTHO05D001239 1.8e-10 70.1 137 35.0
CARHR252010 Cardamine hirsuta HOM05D001338 ORTHO05D001239 1.8e-10 70.1 83 41.0
Oeu020831.2 Olea europaea HOM05D001338 ORTHO05D001239 6.8e-10 68.2 129 32.6
FvH4_6g47641 Fragaria vesca HOM05D001338 ORTHO05D001239 8.8e-10 67.8 141 30.5
CSS0012104 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.5e-09 67.0 143 31.5
Oeu006251.1 Olea europaea HOM05D001338 ORTHO05D001239 4.4e-09 65.5 64 51.6
PSO135G0743 Papaver somniferum HOM05D001338 ORTHO05D001239 4.4e-09 65.5 91 42.9
Oeu035174.1 Olea europaea HOM05D001338 ORTHO05D001239 5.7e-09 65.1 168 29.8
Oeu009496.1 Olea europaea HOM05D001338 ORTHO05D001239 7.5e-09 64.7 149 30.2
CSS0029771 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.3e-08 63.9 137 32.1
PSO144G0149 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-08 63.9 62 51.6
CSS0005716 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.7e-08 63.5 137 32.1
FvH4_1g10851 Fragaria vesca HOM05D001338 ORTHO05D001239 1.7e-08 63.5 90 42.2
CiPaw.15G122600 Carya illinoinensis HOM05D001338 ORTHO05D001239 2.8e-08 62.8 122 33.6
Gorai.009G287700 Gossypium raimondii HOM05D001338 ORTHO05D001239 3.7e-08 62.4 127 33.1
CiPaw.04G075300 Carya illinoinensis HOM05D001338 ORTHO05D001239 6.3e-08 61.6 152 30.9
Glyma.18G183000 Glycine max HOM05D001338 ORTHO05D001239 6.3e-08 61.6 151 29.8
TWI74G1236 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 6.3e-08 61.6 45 62.2
CSS0034678 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 8.3e-08 61.2 48 60.4
PSO063G5722 Papaver somniferum HOM05D001338 ORTHO05D001239 8.3e-08 61.2 136 31.6
CANSAT21G0346 Cannabis sativa HOM05D001338 ORTHO05D001239 1.1e-07 60.8 145 32.4
Oeu034372.1 Olea europaea HOM05D001338 ORTHO05D001239 1.8e-07 60.1 152 28.9
Oeu051319.1 Olea europaea HOM05D001338 ORTHO05D001239 1.8e-07 60.1 51 52.9
PSO339G3227 Papaver somniferum HOM05D001338 ORTHO05D001239 1.8e-07 60.1 125 30.4
Gohir.D05G274450 Gossypium hirsutum HOM05D001338 ORTHO05D001239 3.1e-07 59.3 127 32.3
CiPaw.02G115100 Carya illinoinensis HOM05D001338 ORTHO05D001239 4.1e-07 58.9 137 29.2
PSO675G6439 Papaver somniferum HOM05D001338 ORTHO05D001239 7.0e-07 58.2 51 52.9
AT4G10200 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 1.2e-06 57.4 145 28.3
Oeu019018.1 Olea europaea HOM05D001338 ORTHO05D001239 1.2e-06 57.4 51 52.9
Oeu027891.1 Olea europaea HOM05D001338 ORTHO05D001239 1.2e-06 57.4 51 52.9
Atru.chr5.2972 Acer truncatum HOM05D000003 ORTHO05D002259 1.6e-06 57.0 156 30.8
Oeu012605.1 Olea europaea HOM05D001338 ORTHO05D001239 1.6e-06 57.0 45 57.8
PSO170G3462 Papaver somniferum HOM05D001338 ORTHO05D001239 1.6e-06 57.0 135 30.4
AT3G29638 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 2.0e-06 56.6 138 30.4
Oeu063541.1 Olea europaea HOM05D001338 ORTHO05D001239 2.0e-06 56.6 45 55.6
CSS0023742 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 2.7e-06 56.2 51 51.0
Ciclev10003871m.g Citrus clementina HOM05D000254 ORTHO05D000165 2.7e-06 56.2 194 26.3
TWI74G0662 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 3.5e-06 55.8 122 34.4
Zm00001eb237490 Zea mays HOM05D001338 ORTHO05D001239 3.5e-06 55.8 48 50.0
Sp6g08540 Schrenkiella parvula HOM05D001338 ORTHO05D001239 4.5e-06 55.5 122 36.1


User provided reference genes

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