Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G28550 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 9.1e-167 590.1 287 100.0
AL7G28920 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 2.7e-78 296.2 190 77.9
Thhalv10029518m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 1.0e-77 294.3 190 76.3
BcaB05g23798 Brassica carinata HOM05D002759 ORTHO05D003290 4.6e-62 242.3 205 62.9
Aa31LG6G5020 Aethionema arabicum HOM05D002759 ORTHO05D003290 8.8e-45 184.9 192 51.6
THA.LOC104814230 Tarenaya hassleriana HOM05D002759 ORTHO05D003290 1.3e-43 181.0 186 50.5
Carub.0007s1830 Capsella rubella HOM05D002759 ORTHO05D003290 1.0e-40 171.4 193 47.2
C04p07370 Brassica napus HOM05D002759 ORTHO05D003290 1.7e-40 170.6 190 51.6
AL7G30550 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 2.5e-39 166.8 205 44.4
A03p53910 Brassica napus HOM05D002759 ORTHO05D003290 3.2e-39 166.4 190 47.4
BraA03t14460Z Brassica rapa HOM05D002759 ORTHO05D003290 3.2e-39 166.4 190 47.4
C07p52320 Brassica napus HOM05D002759 ORTHO05D003290 9.4e-39 164.9 190 47.4
BolC1t01691H Brassica oleracea HOM05D002759 ORTHO05D003290 9.4e-39 164.9 193 46.1
BolC7t45725H Brassica oleracea HOM05D002759 ORTHO05D003290 9.4e-39 164.9 190 47.4
C01p17510 Brassica napus HOM05D002759 ORTHO05D003290 1.2e-38 164.5 193 45.6
BcaC09g51048 Brassica carinata HOM05D002759 ORTHO05D003290 1.6e-38 164.1 193 45.6
BraA01t01371Z Brassica rapa HOM05D002759 ORTHO05D003290 2.7e-38 163.3 193 45.6
A01p14240 Brassica napus HOM05D002759 ORTHO05D003290 4.7e-38 162.5 193 45.6
AT4G22970 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 3.0e-37 159.8 193 44.6
Sp7g21060 Schrenkiella parvula HOM05D002759 ORTHO05D003290 5.2e-37 159.1 190 44.2
Thhalv10024187m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 8.8e-37 158.3 177 46.9
BolC4t22942H Brassica oleracea HOM05D002759 ORTHO05D003290 1.5e-36 157.5 145 56.6
BcaC02g11623 Brassica carinata HOM05D002759 ORTHO05D003290 2.6e-36 156.8 145 56.6
C04p13030 Brassica napus HOM05D002759 ORTHO05D003290 2.6e-36 156.8 145 56.6
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 7.5e-36 155.2 204 42.2
BcaB02g09105 Brassica carinata HOM05D002759 ORTHO05D003290 1.3e-35 154.5 146 59.6
Sabra03G0013600 Salix brachista HOM05D002759 ORTHO05D003290 2.8e-35 153.3 201 38.8
BcaNung01007 Brassica carinata HOM05D002759 ORTHO05D003290 5.3e-34 149.1 233 37.3
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 7.0e-34 148.7 202 40.1
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 1.2e-33 147.9 179 43.0
TWI59G0497 Tripterygium wilfordii HOM05D002759 ORTHO05D003290 2.7e-33 146.7 202 42.6
Cfa017189 Carpinus fangiana HOM05D002759 ORTHO05D003290 7.7e-33 145.2 189 40.7
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 7.7e-33 145.2 176 42.6
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 1.0e-32 144.8 204 40.2
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 2.2e-32 143.7 187 42.2
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 6.5e-32 142.1 201 39.8
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 6.5e-32 142.1 201 37.3
Ciclev10000008m.g Citrus clementina HOM05D002759 ORTHO05D003290 1.5e-31 141.0 183 42.6
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 1.9e-31 140.6 204 39.2
QL02p098685 Quercus lobata HOM05D002759 ORTHO05D003290 4.7e-30 136.0 176 40.9
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 8.0e-30 135.2 201 35.3
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 2.3e-29 133.7 179 39.1
Nitab4.5_0004005g0050 Nicotiana tabacum HOM05D002759 ORTHO05D003290 1.2e-28 131.3 179 39.1
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 1.5e-28 131.0 180 38.9
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 5.7e-28 129.0 174 40.2
Sed0002146 Sechium edule HOM05D002759 ORTHO05D003290 1.3e-27 127.9 174 40.2
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 2.2e-27 127.1 177 39.5
Prupe.1G563000 Prunus persica HOM05D002759 ORTHO05D003290 3.7e-27 126.3 175 36.0
CsaV3_6G032190 Cucumis sativus L. HOM05D002759 ORTHO05D003290 6.3e-27 125.6 174 39.1
DCAR_005626 Daucus carota HOM05D002759 ORTHO05D003290 8.3e-27 125.2 177 38.4
PGR042G2027 Punica granatum HOM05D002759 ORTHO05D003290 1.1e-26 124.8 183 38.3
ATR0661G443 Amborella trichopoda HOM05D002759 ORTHO05D003290 4.1e-26 122.9 209 35.4
Solyc01g104490.3 Solanum lycopersicum HOM05D002759 ORTHO05D003290 9.1e-26 121.7 179 36.3
CANSAT11G0811 Cannabis sativa HOM05D002759 ORTHO05D003290 1.2e-25 121.3 187 36.4
MD00G1166400 Malus domestica HOM05D002759 ORTHO05D003290 1.6e-25 120.9 181 37.6
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 2.7e-25 120.2 186 35.5
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 2.7e-25 120.2 179 35.8
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 3.5e-25 119.8 174 37.9
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 4.5e-25 119.4 179 32.4
Glyma.15G048100 Glycine max HOM05D002759 ORTHO05D003290 5.9e-25 119.0 184 38.0
Glyma.08G184200 Glycine max HOM05D002759 ORTHO05D003290 7.7e-25 118.6 185 37.8
Thecc.02G041500 Theobroma cacao HOM05D002759 ORTHO05D003290 2.9e-24 116.7 195 34.4
Lj6g0007416 Lotus japonicus HOM05D002759 ORTHO05D003290 3.8e-24 116.3 184 38.0
Lj1g0017629 Lotus japonicus HOM05D002759 ORTHO05D003290 5.0e-24 115.9 184 37.5
CAN.G1352.21 Capsicum annuum HOM05D002759 ORTHO05D003290 1.5e-23 114.4 179 33.5
Duzib052G0069 Durio zibethinus HOM05D002759 ORTHO05D003290 1.9e-23 114.0 136 38.2
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 1.2e-22 111.3 182 31.3
ECA234G1843 Erigeron canadensis HOM05D002759 ORTHO05D003290 1.6e-22 110.9 186 31.2
arahy.Tifrunner.gnm1.ann1.VDG0KY Arachis hypogaea HOM05D002759 ORTHO05D003290 2.8e-22 110.2 176 36.9
arahy.Tifrunner.gnm1.ann1.YVTC7U Arachis hypogaea HOM05D002759 ORTHO05D003290 6.1e-22 109.0 176 35.8
Lj9C311G18 Lonicera japonica HOM05D002759 ORTHO05D003290 6.1e-22 109.0 222 31.1
Phvul.006G212401 Phaseolus vulgaris HOM05D002759 ORTHO05D003290 6.1e-22 109.0 184 37.0
COL.COLO4_08439 Corchorus olitorius HOM05D002759 ORTHO05D003290 1.4e-21 107.8 137 36.5
Ca_00091_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 1.8e-21 107.5 176 33.5
Ca_29930_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 1.8e-21 107.5 176 33.5
SGA_v2.0_scaffold110G31284 Striga asiatica HOM05D002759 ORTHO05D003290 6.8e-21 105.5 183 35.0
FAN16G3014 Fragaria x ananassa HOM05D002759 ORTHO05D003290 2.6e-20 103.6 175 34.9
Aqoxy3G00692 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 3.4e-20 103.2 189 32.8
FvH4_3g35420 Fragaria vesca HOM05D002759 ORTHO05D003290 3.4e-20 103.2 175 34.9
Gorai.002G207900 Gossypium raimondii HOM05D002759 ORTHO05D003290 3.4e-20 103.2 136 36.8
FAN11G2638 Fragaria x ananassa HOM05D002759 ORTHO05D003290 4.4e-20 102.8 175 34.9
Lalb_Chr20g0123401 Lupinus albus HOM05D002759 ORTHO05D003290 4.4e-20 102.8 184 34.2
PSO528G0214 Papaver somniferum HOM05D002759 ORTHO05D003290 4.4e-20 102.8 182 30.2
FAN25G1732 Fragaria x ananassa HOM05D002759 ORTHO05D003290 5.7e-20 102.4 138 38.4
Medtr2g007790 Medicago truncatula HOM05D002759 ORTHO05D003290 5.7e-20 102.4 176 34.1
MD00G1111200 Malus domestica HOM05D002759 ORTHO05D003290 9.8e-20 101.7 165 35.8
Eucgr.G00634 Eucalyptus grandis HOM05D002759 ORTHO05D003290 2.8e-19 100.1 194 33.0
PSO170G2118 Papaver somniferum HOM05D002759 ORTHO05D003290 3.7e-19 99.8 182 30.8
Oeu008876.1 Olea europaea HOM05D002759 ORTHO05D003290 8.3e-19 98.6 136 37.5
SalBow5G5260 Salvia bowleyana HOM05D002759 ORTHO05D003290 8.3e-19 98.6 220 28.6
CARHR284400 Cardamine hirsuta HOM05D002759 ORTHO05D003290 1.4e-18 97.8 98 50.0
RcHm_v2.0_Chr7g0222331 Rosa chinensis HOM05D002759 ORTHO05D003290 1.4e-18 97.8 175 31.4
Psat1g219920 Pisum sativum HOM05D002759 ORTHO05D003290 3.2e-18 96.7 176 32.4
MD08G1225400 Malus domestica HOM05D002759 ORTHO05D003290 5.4e-18 95.9 174 33.3
Sc19g0000800 Simmondsia chinensis HOM05D002759 ORTHO05D003290 7.0e-18 95.5 200 31.5
MD15G1418900 Malus domestica HOM05D002759 ORTHO05D003290 9.2e-18 95.1 200 33.5
Migut.B00666 Erythranthe guttata HOM05D002759 ORTHO05D003290 2.7e-17 93.6 156 34.0
TPR.G2149 Trifolium pratense HOM05D002759 ORTHO05D003290 5.9e-17 92.4 176 33.0
Nitab4.5_0005539g0020 Nicotiana tabacum HOM05D002759 ORTHO05D003290 1.0e-16 91.7 179 33.0
Hund11642 Selenicereus undatus HOM05D002759 ORTHO05D003290 5.0e-16 89.4 177 30.5
Cc02_g22260 Coffea canephora HOM05D002759 ORTHO05D003290 8.6e-16 88.6 189 29.1
Medtr7g023120 Medicago truncatula HOM05D002759 ORTHO05D003290 5.6e-15 85.9 213 28.2
C04p02400 Brassica napus HOM05D002759 ORTHO05D000588 1.4e-13 81.3 75 56.0
Aqoxy3G00698 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 5.2e-13 79.3 136 34.6
Cpa.g.sc148.31 Carica papaya HOM05D002759 ORTHO05D003290 5.2e-13 79.3 83 44.6
arahy.Tifrunner.gnm1.ann1.HX0PY9 Arachis hypogaea HOM05D002759 ORTHO05D003290 6.8e-13 79.0 175 28.6
FAN08G3490 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.3e-11 74.7 136 33.8
AUR62035559 Chenopodium quinoa HOM05D002759 ORTHO05D003290 6.4e-11 72.4 199 25.6
SEGI_36049 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 8.3e-11 72.0 145 27.6
SEGI_09272 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 2.7e-09 67.0 139 28.1
MD00G1111100 Malus domestica HOM05D002759 ORTHO05D003290 6.2e-06 55.8 75 36.0


User provided reference genes

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