Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G26720 Arabidopsis thaliana HOM05D008255 ORTHO05D011943 7.8e-60 233.8 135 100.0
AL6G38460 Arabidopsis lyrata HOM05D008255 ORTHO05D011943 9.9e-39 163.7 141 80.9
CARHR186950 Cardamine hirsuta HOM05D008255 ORTHO05D011943 4.3e-34 148.3 143 73.4
Thhalv10005106m.g Eutrema salsugineum HOM05D008255 ORTHO05D011943 7.6e-31 137.5 142 54.9
Sp2g21360 Schrenkiella parvula HOM05D008255 ORTHO05D011943 1.1e-29 133.7 147 57.1
BcaNung03958 Brassica carinata HOM05D008255 ORTHO05D011943 4.2e-29 131.7 136 63.2
Carub.0006s2424 Capsella rubella HOM05D008255 ORTHO05D011943 3.1e-24 115.5 132 70.5
BraA06t26610Z Brassica rapa HOM05D008255 ORTHO05D011943 1.1e-21 107.1 142 52.8
A06p36840 Brassica napus HOM05D008255 ORTHO05D011943 3.5e-20 102.1 144 45.1
BcaNung02826 Brassica carinata HOM05D008255 ORTHO05D011943 7.9e-20 100.9 149 46.3
BolC7t44700H Brassica oleracea HOM05D008255 ORTHO05D011943 7.9e-20 100.9 149 46.3
C07p41630 Brassica napus HOM05D008255 ORTHO05D011943 1.8e-19 99.8 148 45.3
C02p59110 Brassica napus HOM05D008255 ORTHO05D011943 8.1e-17 90.9 135 55.6
BcaB07g29964 Brassica carinata HOM05D008255 ORTHO05D011943 1.4e-16 90.1 140 44.3
BcaNung03956 Brassica carinata HOM05D008255 ORTHO05D011943 5.8e-15 84.7 91 53.8
BolC2t11966H Brassica oleracea HOM05D008255 ORTHO05D011943 4.9e-14 81.6 140 51.4
BcaC03g17871 Brassica carinata HOM05D008255 ORTHO05D011943 8.4e-14 80.9 140 50.7
A02p39380 Brassica napus HOM05D008255 ORTHO05D011943 1.1e-13 80.5 140 45.7
Aa31LG11G10020 Aethionema arabicum HOM05D008255 ORTHO05D011943 2.7e-12 75.9 140 51.4
BraA02t08903Z Brassica rapa HOM05D008255 ORTHO05D011943 2.7e-12 75.9 140 47.1
THA.LOC104802769 Tarenaya hassleriana HOM05D008255 ORTHO05D011943 8.7e-11 70.9 86 47.7
Aqoxy7G02124 Aquilegia oxysepala HOM05D008155 ORTHO05D010411 2.0e-07 59.7 38 65.8
CSS0018964 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 1.3e-06 57.0 86 41.9
QL03p011396 Quercus lobata HOM05D008155 ORTHO05D010411 1.7e-06 56.6 98 37.8
TWI56G0796 Tripterygium wilfordii HOM05D008155 ORTHO05D010411 4.9e-06 55.1 62 46.8
CANSAT54G1408 Cannabis sativa HOM05D008155 ORTHO05D010411 6.5e-06 54.7 102 34.3


User provided reference genes

Program Settings