Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G26640 Arabidopsis thaliana HOM05D001662 ORTHO05D007520 4.9e-33 143.7 63 100.0
BraA06t26618Z Brassica rapa HOM05D001662 ORTHO05D007520 4.5e-18 94.0 60 68.3
Nitab4.5_0006117g0020 Nicotiana tabacum HOM05D001662 ORTHO05D007520 2.2e-12 75.1 45 66.7
Sp3g04760 Schrenkiella parvula HOM05D001662 ORTHO05D007520 3.7e-12 74.3 35 82.9
CAN.G1248.13 Capsicum annuum HOM05D001662 ORTHO05D007520 4.8e-12 73.9 34 85.3
BcaB05g22003 Brassica carinata HOM05D001662 ORTHO05D007520 8.2e-12 73.2 32 87.5
BcaB07g29943 Brassica carinata HOM05D001662 ORTHO05D007520 8.2e-12 73.2 32 87.5
BcaC03g17836 Brassica carinata HOM05D001662 ORTHO05D007520 8.2e-12 73.2 32 87.5
BcaNung03684 Brassica carinata HOM05D001662 ORTHO05D007520 8.2e-12 73.2 32 87.5
BcaNung03905 Brassica carinata HOM05D001662 ORTHO05D007520 8.2e-12 73.2 32 87.5
A02p39060 Brassica napus HOM05D001662 ORTHO05D007520 8.2e-12 73.2 32 87.5
A06p36930 Brassica napus HOM05D001662 ORTHO05D007520 8.2e-12 73.2 32 87.5
C02p58680 Brassica napus HOM05D001662 ORTHO05D007520 8.2e-12 73.2 32 87.5
C07p41570 Brassica napus HOM05D001662 ORTHO05D007520 8.2e-12 73.2 32 87.5
BolC2t11928H Brassica oleracea HOM05D001662 ORTHO05D007520 8.2e-12 73.2 32 87.5
BolC7t44690H Brassica oleracea HOM05D001662 ORTHO05D007520 8.2e-12 73.2 32 87.5
BraA02t08875Z Brassica rapa HOM05D001662 ORTHO05D007520 8.2e-12 73.2 32 87.5
Thhalv10005548m.g Eutrema salsugineum HOM05D001662 ORTHO05D007520 8.2e-12 73.2 32 87.5
SGA_v2.0_scaffold117G32418 Striga asiatica HOM05D001662 ORTHO05D007520 8.2e-12 73.2 40 72.5
Ah.06g190750 Amaranthus hybridus HOM05D001662 ORTHO05D007520 1.1e-11 72.8 34 82.4
AUR62000480 Chenopodium quinoa HOM05D001662 ORTHO05D007520 2.4e-11 71.6 33 84.8
vmacro01666 Vaccinium macrocarpon HOM05D001662 ORTHO05D007520 2.4e-11 71.6 33 84.8
Aqoxy24s001 Aquilegia oxysepala HOM05D001662 ORTHO05D007520 3.1e-11 71.2 35 82.9
FvH4_6g08560 Fragaria vesca HOM05D001662 ORTHO05D007520 3.1e-11 71.2 35 82.9
FvH4_6g43400 Fragaria vesca HOM05D001662 ORTHO05D007520 3.1e-11 71.2 35 82.9
FAN02G1014 Fragaria x ananassa HOM05D001662 ORTHO05D007520 3.1e-11 71.2 35 82.9
FAN02G1833 Fragaria x ananassa HOM05D001662 ORTHO05D007520 3.1e-11 71.2 35 82.9
FAN05G0725 Fragaria x ananassa HOM05D001662 ORTHO05D007520 3.1e-11 71.2 35 82.9
FAN09G2109 Fragaria x ananassa HOM05D001662 ORTHO05D007520 3.1e-11 71.2 35 82.9
FAN14G0262 Fragaria x ananassa HOM05D001662 ORTHO05D007520 3.1e-11 71.2 35 82.9
FAN14G1181 Fragaria x ananassa HOM05D001662 ORTHO05D007520 3.1e-11 71.2 35 82.9
Nitab4.5_0002516g0040 Nicotiana tabacum HOM05D001662 ORTHO05D007520 3.1e-11 71.2 34 79.4
RcHm_v2.0_Chr1g0321441 Rosa chinensis HOM05D001662 ORTHO05D007520 3.1e-11 71.2 35 82.9
SGA_v2.0_scaffold279G46779 Striga asiatica HOM05D001662 ORTHO05D007520 3.1e-11 71.2 35 82.9
Rhsim11G0105600 Rhododendron simsii HOM05D001662 ORTHO05D007520 5.3e-11 70.5 33 81.8
Actinidia01661 Actinidia chinensis HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
AL3G16630 Arabidopsis lyrata HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
AL8G16030 Arabidopsis lyrata HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
AT3G05870 Arabidopsis thaliana HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
EL10Ac4g09568 Beta vulgaris HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
CSS0043752 Camellia sinensis var. sinensis HOM05D001662 ORTHO05D007520 6.9e-11 70.1 34 79.4
CANSAT54G1905 Cannabis sativa HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
CiPaw.01G001400 Carya illinoinensis HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
AUR62006823 Chenopodium quinoa HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
Ciclev10006206m.g Citrus clementina HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
Cc10_g10070 Coffea canephora HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
DCAR_025400 Daucus carota HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
Dinv03875 Davidia involucrata HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
Migut.D01691 Erythranthe guttata HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
Lsat_1_v5_gn_5_34581 Lactuca sativa HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
Lj5g0007829 Lotus japonicus HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
MD04G1186000 Malus domestica HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
MD05G1140700 Malus domestica HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
Medtr4g007410 Medicago truncatula HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
Medtr7g005900 Medicago truncatula HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
Nitab4.5_0000081g0250 Nicotiana tabacum HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
Nitab4.5_0002572g0010 Nicotiana tabacum HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
Oeu061907.1 Olea europaea HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
Oeu062794.1 Olea europaea HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
Oeu062796.1 Olea europaea HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
Peaxi162Scf00585g00110 Petunia axillaris HOM05D002440 ORTHO05D002576 6.9e-11 70.1 32 84.4
PGR142G3386 Punica granatum HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
QL03p013942 Quercus lobata HOM05D000001 ORTHO05D000003 6.9e-11 70.1 32 84.4
Hund07269 Selenicereus undatus HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
Hund21831 Selenicereus undatus HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
PGSC0003DMG400018281 Solanum tuberosum HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
TPR.G14231 Trifolium pratense HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
TPR.G3331 Trifolium pratense HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
TWI36G1680 Tripterygium wilfordii HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
TWI75G1241 Tripterygium wilfordii HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
GSVIVG01026815001 Vitis vinifera HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
GSVIVG01031335001 Vitis vinifera HOM05D001662 ORTHO05D007520 6.9e-11 70.1 32 84.4
Lj4g0014736 Lotus japonicus HOM05D001662 ORTHO05D007520 1.2e-10 69.3 32 81.2
MBI18_g25058_MAGBIO Magnolia biondii HOM05D001662 ORTHO05D007520 1.5e-10 68.9 32 81.2
Nitab4.5_0001463g0140 Nicotiana tabacum HOM05D001662 ORTHO05D007520 1.5e-10 68.9 33 81.8
Os03g0302700 Oryza sativa ssp. japonica HOM05D001662 ORTHO05D007520 2.0e-10 68.6 32 81.2
ClCG09G010060 Citrullus lanatus HOM05D001662 ORTHO05D007520 2.6e-10 68.2 32 81.2
Haze_15020 Corylus avellana HOM05D001662 ORTHO05D007520 2.6e-10 68.2 32 81.2
MELO3C028650.2 Cucumis melo HOM05D001662 ORTHO05D007520 2.6e-10 68.2 32 81.2
CsaV3_7G024700 Cucumis sativus L. HOM05D001662 ORTHO05D007520 2.6e-10 68.2 32 81.2
Sed0008097 Sechium edule HOM05D001662 ORTHO05D007520 2.6e-10 68.2 32 81.2
Sed0021388 Sechium edule HOM05D001662 ORTHO05D007520 2.6e-10 68.2 32 81.2
unitig_8.g2972 Utricularia gibba HOM05D001662 ORTHO05D007520 2.6e-10 68.2 35 77.1
COL.COLO4_04114 Corchorus olitorius HOM05D001662 ORTHO05D007520 5.9e-10 67.0 32 81.2
Duzib170G0793 Durio zibethinus HOM05D001662 ORTHO05D007520 5.9e-10 67.0 32 81.2
Gorai.013G252500 Gossypium raimondii HOM05D001662 ORTHO05D007520 5.9e-10 67.0 32 81.2
Prupe.2G083700 Prunus persica HOM05D001662 ORTHO05D007520 5.9e-10 67.0 32 81.2
THA.LOC104818757 Tarenaya hassleriana HOM05D001662 ORTHO05D007520 5.9e-10 67.0 32 81.2
FAN09G4621 Fragaria x ananassa HOM05D001662 ORTHO05D007520 7.7e-10 66.6 35 77.1
Os07g0411200 Oryza sativa ssp. japonica HOM05D001662 ORTHO05D007520 7.7e-10 66.6 32 78.1
PSO729G0020 Papaver somniferum HOM05D001662 ORTHO05D007520 1.0e-09 66.2 32 78.1
ECA236G3263 Erigeron canadensis HOM05D001662 ORTHO05D007520 2.2e-09 65.1 32 75.0
PSO761G0719 Papaver somniferum HOM05D001662 ORTHO05D007520 2.9e-09 64.7 32 78.1
SMO356G0205 Selaginella moellendorffii HOM05D001662 ORTHO05D007520 3.8e-09 64.3 32 71.9
CSS0010750 Camellia sinensis var. sinensis HOM05D001662 ORTHO05D007520 6.5e-09 63.5 32 75.0
SHI10338 Sapria himalayana HOM05D001662 ORTHO05D007520 8.5e-09 63.2 32 71.9
Carub.0005s0519 Capsella rubella HOM05D001662 ORTHO05D007520 1.0e-06 56.2 40 65.0


User provided reference genes

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