Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G26060 Arabidopsis thaliana HOM05D008373 ORTHO05D015254 1.5e-91 339.3 155 100.0
AL6G38050 Arabidopsis lyrata HOM05D008373 ORTHO05D015254 4.1e-81 304.7 155 87.7
A06p36560 Brassica napus HOM05D008373 ORTHO05D015254 8.0e-77 290.4 155 80.6
BolC7t44722H Brassica oleracea HOM05D008373 ORTHO05D015254 8.0e-77 290.4 155 81.3
BraA06t26582Z Brassica rapa HOM05D008373 ORTHO05D015254 8.0e-77 290.4 155 80.6
Carub.0006s2382 Capsella rubella HOM05D008373 ORTHO05D015254 1.8e-76 289.3 155 81.3
CARHR187340 Cardamine hirsuta HOM05D008373 ORTHO05D015254 1.8e-76 289.3 155 80.0
C07p41920 Brassica napus HOM05D008373 ORTHO05D015254 2.3e-76 288.9 155 80.6
BcaNung03983 Brassica carinata HOM05D008373 ORTHO05D015254 3.1e-76 288.5 155 80.6
Thhalv10005065m.g Eutrema salsugineum HOM05D008373 ORTHO05D015254 6.8e-76 287.3 157 80.9
Sp2g21670 Schrenkiella parvula HOM05D008373 ORTHO05D010873 7.5e-67 257.3 138 81.2
Aa31LG11G5030 Aethionema arabicum HOM05D008373 ORTHO05D015254 2.2e-66 255.8 155 72.9
THA.LOC104799169 Tarenaya hassleriana HOM05D008373 ORTHO05D015254 1.4e-60 236.5 156 62.2
AT5G11820 Arabidopsis thaliana HOM05D008373 ORTHO05D010873 2.2e-13 79.7 143 37.1
C02p05400 Brassica napus HOM05D008373 ORTHO05D010873 2.2e-13 79.7 122 35.2
AL6G38040 Arabidopsis lyrata HOM05D008373 ORTHO05D010873 3.7e-13 79.0 150 32.0
AL6G22570 Arabidopsis lyrata HOM05D008373 ORTHO05D010873 8.2e-13 77.8 137 38.0
BraA10t44655Z Brassica rapa HOM05D008373 ORTHO05D010873 1.4e-12 77.0 153 32.7
AT5G26050 Arabidopsis thaliana HOM05D008373 ORTHO05D010873 1.8e-12 76.6 150 30.7
Carub.0006s1035 Capsella rubella HOM05D008373 ORTHO05D010873 1.8e-12 76.6 143 35.7
THA.LOC104811243 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 3.1e-12 75.9 152 33.6
Thhalv10015656m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 4.1e-12 75.5 145 31.0
Carub.0006s2381 Capsella rubella HOM05D008373 ORTHO05D010873 5.3e-12 75.1 121 34.7
THA.LOC104811315 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 9.0e-12 74.3 155 32.3
A02p39180 Brassica napus HOM05D008373 ORTHO05D010873 2.6e-11 72.8 123 31.7
BcaC04g23598 Brassica carinata HOM05D008373 ORTHO05D010873 4.5e-11 72.0 134 33.6
C09p06580 Brassica napus HOM05D008373 ORTHO05D010873 4.5e-11 72.0 134 33.6
BolC9t53584H Brassica oleracea HOM05D008373 ORTHO05D010873 4.5e-11 72.0 134 33.6
BraA02t08883Z Brassica rapa HOM05D008373 ORTHO05D010873 4.5e-11 72.0 121 31.4
BcaNung03984 Brassica carinata HOM05D008373 ORTHO05D010873 7.7e-11 71.2 120 31.7
A06p36550 Brassica napus HOM05D008373 ORTHO05D010873 7.7e-11 71.2 152 29.6
A09p06020 Brassica napus HOM05D008373 ORTHO05D010873 7.7e-11 71.2 106 36.8
BraA06t26581Z Brassica rapa HOM05D008373 ORTHO05D010873 7.7e-11 71.2 152 29.6
BraA09t36244Z Brassica rapa HOM05D008373 ORTHO05D010873 7.7e-11 71.2 106 36.8
BolC7t44724H Brassica oleracea HOM05D008373 ORTHO05D010873 1.0e-10 70.9 152 28.9
C07p41930 Brassica napus HOM05D008373 ORTHO05D010873 1.3e-10 70.5 124 31.5
BcaB04g19754 Brassica carinata HOM05D008373 ORTHO05D010873 1.7e-10 70.1 106 35.8
Thhalv10005364m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 2.9e-10 69.3 152 28.9
THA.LOC104811242 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 2.9e-10 69.3 110 37.3
Aa31LG3G15380 Aethionema arabicum HOM05D008373 ORTHO05D010873 8.5e-10 67.8 124 33.9
CARHR187330 Cardamine hirsuta HOM05D008373 ORTHO05D010873 8.5e-10 67.8 135 32.6
Thhalv10015698m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 8.5e-10 67.8 155 29.0
Gorai.004G058000 Gossypium raimondii HOM05D000256 ORTHO05D000119 6.7e-07 58.2 146 32.9
CAN.G194.33 Capsicum annuum HOM05D000256 ORTHO05D000119 1.5e-06 57.0 119 29.4
Gohir.A08G046400 Gossypium hirsutum HOM05D000256 ORTHO05D000119 2.5e-06 56.2 136 33.8
Hma1.2p1_0785F.1_g217560 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 3.3e-06 55.8 100 34.0
Dinv38286 Davidia involucrata HOM05D005430 ORTHO05D007814 9.7e-06 54.3 91 35.2
Migut.I00440 Erythranthe guttata HOM05D000256 ORTHO05D000119 9.7e-06 54.3 95 31.6


User provided reference genes

Program Settings