Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G26050 Arabidopsis thaliana HOM05D008373 ORTHO05D010873 1.7e-93 345.9 161 100.0
AL6G38040 Arabidopsis lyrata HOM05D008373 ORTHO05D010873 5.8e-86 320.9 161 90.7
Carub.0006s2381 Capsella rubella HOM05D008373 ORTHO05D010873 4.1e-76 288.1 161 82.6
BcaNung03984 Brassica carinata HOM05D008373 ORTHO05D010873 6.6e-74 280.8 161 80.1
Thhalv10005364m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 1.5e-73 279.6 163 79.8
A06p36550 Brassica napus HOM05D008373 ORTHO05D010873 5.6e-73 277.7 161 79.5
BraA06t26581Z Brassica rapa HOM05D008373 ORTHO05D010873 5.6e-73 277.7 161 79.5
CARHR187330 Cardamine hirsuta HOM05D008373 ORTHO05D010873 1.6e-72 276.2 161 79.5
Sp2g21670 Schrenkiella parvula HOM05D008373 ORTHO05D010873 1.6e-72 276.2 161 80.1
BolC7t44724H Brassica oleracea HOM05D008373 ORTHO05D010873 3.6e-72 275.0 161 78.9
C07p41930 Brassica napus HOM05D008373 ORTHO05D010873 1.4e-71 273.1 161 77.6
BraA02t08883Z Brassica rapa HOM05D008373 ORTHO05D010873 3.2e-68 261.9 161 73.3
BcaB04g19754 Brassica carinata HOM05D008373 ORTHO05D010873 1.6e-67 259.6 161 75.8
BcaC04g23598 Brassica carinata HOM05D008373 ORTHO05D010873 2.3e-66 255.8 161 73.9
C09p06580 Brassica napus HOM05D008373 ORTHO05D010873 2.3e-66 255.8 161 73.9
BolC9t53584H Brassica oleracea HOM05D008373 ORTHO05D010873 2.3e-66 255.8 161 73.9
BraA09t36244Z Brassica rapa HOM05D008373 ORTHO05D010873 6.6e-66 254.2 161 73.3
A09p06020 Brassica napus HOM05D008373 ORTHO05D010873 8.6e-66 253.8 161 73.3
A02p39180 Brassica napus HOM05D008373 ORTHO05D010873 9.6e-65 250.4 146 76.0
Thhalv10015698m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 5.6e-57 224.6 158 69.0
THA.LOC104811242 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 2.1e-48 196.1 166 60.2
C02p58780 Brassica napus HOM05D008373 ORTHO05D010873 3.8e-45 185.3 116 71.6
BcaC03g17838 Brassica carinata HOM05D000073 ORTHO05D008214 1.2e-43 180.3 143 60.1
BolC2t11937H Brassica oleracea HOM05D008373 ORTHO05D010873 7.9e-43 177.6 117 70.1
Aa31LG3G15380 Aethionema arabicum HOM05D008373 ORTHO05D010873 1.9e-33 146.4 143 51.0
THA.LOC104811315 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 1.3e-29 133.7 163 46.0
CARHR187310 Cardamine hirsuta HOM05D008373 ORTHO05D010873 2.2e-29 132.9 81 77.8
A02p01220 Brassica napus HOM05D008373 ORTHO05D010873 1.7e-24 116.7 152 38.8
BraA02t05101Z Brassica rapa HOM05D008373 ORTHO05D010873 1.7e-24 116.7 152 38.8
BcaNung02651 Brassica carinata HOM05D008373 ORTHO05D010873 6.3e-24 114.8 152 37.5
C02p05400 Brassica napus HOM05D008373 ORTHO05D010873 2.4e-23 112.8 152 37.5
BolC2t06488H Brassica oleracea HOM05D008373 ORTHO05D010873 2.4e-23 112.8 152 38.2
BcaC03g13394 Brassica carinata HOM05D008373 ORTHO05D010873 4.1e-23 112.1 152 38.2
THA.LOC104811314 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 6.9e-23 111.3 147 44.2
AL6G22570 Arabidopsis lyrata HOM05D008373 ORTHO05D010873 3.4e-22 109.0 153 40.5
C09p65010 Brassica napus HOM05D008373 ORTHO05D010873 5.0e-21 105.1 153 39.2
A10p25930 Brassica napus HOM05D008373 ORTHO05D010873 6.5e-21 104.8 153 39.2
BolC9t59329H Brassica oleracea HOM05D008373 ORTHO05D010873 8.5e-21 104.4 153 38.6
BcaC04g19192 Brassica carinata HOM05D008373 ORTHO05D010873 1.1e-20 104.0 153 38.6
AT5G11820 Arabidopsis thaliana HOM05D008373 ORTHO05D010873 1.4e-20 103.6 153 39.2
Thhalv10015656m.g Eutrema salsugineum HOM05D008373 ORTHO05D010873 1.4e-20 103.6 159 38.4
Sp6g31780 Schrenkiella parvula HOM05D008373 ORTHO05D010873 2.5e-20 102.8 150 37.3
BraA10t44655Z Brassica rapa HOM05D008373 ORTHO05D010873 9.4e-20 100.9 155 38.1
Carub.0006s1035 Capsella rubella HOM05D008373 ORTHO05D010873 9.4e-20 100.9 153 37.9
THA.LOC104811243 Tarenaya hassleriana HOM05D008373 ORTHO05D010873 2.7e-19 99.4 150 36.7
CARHR201340 Cardamine hirsuta HOM05D008373 ORTHO05D010873 5.1e-18 95.1 153 34.6
Aa31LG11G5030 Aethionema arabicum HOM05D008373 ORTHO05D015254 2.2e-16 89.7 126 38.1
AL6G38050 Arabidopsis lyrata HOM05D008373 ORTHO05D015254 6.3e-16 88.2 150 33.3
BolC7t44722H Brassica oleracea HOM05D008373 ORTHO05D015254 2.4e-15 86.3 150 33.3
C07p41920 Brassica napus HOM05D008373 ORTHO05D015254 3.1e-15 85.9 150 33.3
A06p36560 Brassica napus HOM05D008373 ORTHO05D015254 4.1e-15 85.5 150 33.3
BraA06t26582Z Brassica rapa HOM05D008373 ORTHO05D015254 4.1e-15 85.5 150 33.3
Thhalv10005065m.g Eutrema salsugineum HOM05D008373 ORTHO05D015254 4.1e-15 85.5 155 34.8
THA.LOC104799169 Tarenaya hassleriana HOM05D008373 ORTHO05D015254 1.5e-14 83.6 107 39.3
BcaNung03983 Brassica carinata HOM05D008373 ORTHO05D015254 4.5e-14 82.0 150 33.3
AT5G26060 Arabidopsis thaliana HOM05D008373 ORTHO05D015254 2.9e-13 79.3 150 30.7
Carub.0006s2382 Capsella rubella HOM05D008373 ORTHO05D015254 6.5e-13 78.2 153 30.1
CARHR187340 Cardamine hirsuta HOM05D008373 ORTHO05D015254 2.5e-12 76.3 150 30.0
PSO017G0413 Papaver somniferum HOM05D000256 ORTHO05D000119 2.4e-07 59.7 120 30.8
PSO675G7596 Papaver somniferum HOM05D000256 ORTHO05D000119 2.0e-06 56.6 115 30.4


User provided reference genes

Program Settings