Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G24880 Arabidopsis thaliana HOM05D008799 ORTHO05D010975 7.9e-178 627.5 444 100.0
AL6G36554 Arabidopsis lyrata HOM05D008799 ORTHO05D010975 1.2e-138 497.3 445 83.1
CARHR188570 Cardamine hirsuta HOM05D008799 ORTHO05D010975 5.8e-112 408.7 451 74.9
Sp2g22570 Schrenkiella parvula HOM05D008799 ORTHO05D010975 5.8e-96 355.5 453 67.5
Thhalv10004239m.g Eutrema salsugineum HOM05D008799 ORTHO05D010975 1.6e-93 347.4 404 71.3
A06p35660 Brassica napus HOM05D008799 ORTHO05D010975 2.5e-86 323.6 449 63.0
BraA06t26491Z Brassica rapa HOM05D008799 ORTHO05D010975 7.1e-86 322.0 448 65.0
BcaNung05897 Brassica carinata HOM05D008799 ORTHO05D010975 2.9e-79 300.1 457 60.4
Carub.0006s2273 Capsella rubella HOM05D008799 ORTHO05D010975 8.4e-79 298.5 459 60.3
C07p42890 Brassica napus HOM05D008799 ORTHO05D010975 1.8e-73 280.8 448 60.9
BolC7t44817H Brassica oleracea HOM05D008799 ORTHO05D010975 1.8e-73 280.8 448 60.9
CARHR202650 Cardamine hirsuta HOM05D008799 ORTHO05D010975 6.7e-68 262.3 454 55.7
BcaB01g06270 Brassica carinata HOM05D008799 ORTHO05D010975 4.5e-56 223.0 465 53.1
Sp6g32790 Schrenkiella parvula HOM05D008799 ORTHO05D010975 3.8e-55 219.9 452 54.2
Carub.0006s0914 Capsella rubella HOM05D008799 ORTHO05D010975 3.0e-52 210.3 454 54.4
BraA03t09809Z Brassica rapa HOM05D008799 ORTHO05D010975 4.0e-52 209.9 461 49.5
A02p00590 Brassica napus HOM05D008799 ORTHO05D010975 7.4e-51 205.7 448 46.2
Aa31LG3G16460 Aethionema arabicum HOM05D008799 ORTHO05D010975 1.7e-50 204.5 480 47.3
AL6G21190 Arabidopsis lyrata HOM05D008799 ORTHO05D010975 8.2e-50 202.2 452 49.1
C03p05400 Brassica napus HOM05D008799 ORTHO05D010975 1.6e-48 198.0 466 48.3
A10p26930 Brassica napus HOM05D008799 ORTHO05D010975 7.7e-48 195.7 453 46.6
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 1.3e-47 194.9 466 48.1
BraA10t44744Z Brassica rapa HOM05D008799 ORTHO05D010975 8.5e-47 192.2 453 45.5
BcaB05g21498 Brassica carinata HOM05D008799 ORTHO05D010975 1.5e-46 191.4 474 43.2
BcaB01g05508 Brassica carinata HOM05D008799 ORTHO05D010975 2.7e-45 187.2 463 50.8
BcaC04g19292 Brassica carinata HOM05D008799 ORTHO05D010975 2.0e-43 181.0 255 56.9
A03p04690 Brassica napus HOM05D008799 ORTHO05D010975 2.6e-43 180.6 453 49.9
THA.LOC104814972 Tarenaya hassleriana HOM05D008799 ORTHO05D010975 1.7e-42 177.9 457 46.6
BolC2t12057H Brassica oleracea HOM05D008799 ORTHO05D010975 4.8e-42 176.4 332 50.3
BraA02t05042Z Brassica rapa HOM05D008799 ORTHO05D010975 6.3e-42 176.0 449 47.2
BcaC03g13324 Brassica carinata HOM05D008799 ORTHO05D010975 1.8e-41 174.5 457 43.8
C02p04580 Brassica napus HOM05D008799 ORTHO05D010975 7.0e-41 172.6 454 48.5
Aa31LG11G4080 Aethionema arabicum HOM05D008799 ORTHO05D010975 5.9e-40 169.5 248 50.4
C09p66120 Brassica napus HOM05D008799 ORTHO05D010975 1.7e-39 167.9 455 42.6
BolC9t59432H Brassica oleracea HOM05D008799 ORTHO05D010975 1.7e-39 167.9 455 42.6
BcaB08g37100 Brassica carinata HOM05D008799 ORTHO05D010975 2.9e-39 167.2 253 53.4
AT5G10660 Arabidopsis thaliana HOM05D008799 ORTHO05D010975 8.5e-39 165.6 432 46.8
BraA02t08970Z Brassica rapa HOM05D008799 ORTHO05D010975 1.1e-33 148.7 241 53.1
THA.LOC104803324 Tarenaya hassleriana HOM05D008799 ORTHO05D010975 7.0e-33 146.0 463 36.7
BolC2t06418H Brassica oleracea HOM05D008799 ORTHO05D010975 1.6e-32 144.8 450 39.6
A02p40060 Brassica napus HOM05D008799 ORTHO05D010975 5.9e-32 142.9 241 52.3
C02p60030 Brassica napus HOM05D008799 ORTHO05D010975 6.6e-23 112.8 134 62.7
BcaC03g17942 Brassica carinata HOM05D008799 ORTHO05D010975 3.7e-18 97.1 128 59.4
Ciclev10010613m.g Citrus clementina HOM05D014278 ORTHO05D009846 5.4e-09 66.6 477 32.5
Sabra18G0011200 Salix brachista HOM05D014278 ORTHO05D009846 6.6e-07 59.7 463 27.9
Sabra18G0013600 Salix brachista HOM05D014278 ORTHO05D009846 6.6e-07 59.7 463 27.9
Potri.018G005500 Populus trichocarpa HOM05D014278 ORTHO05D009846 8.6e-07 59.3 463 32.2
Potri.006G274600 Populus trichocarpa HOM05D014278 ORTHO05D009846 9.5e-06 55.8 461 28.0


User provided reference genes

Program Settings