Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G24370 Arabidopsis thaliana HOM05D009945 ORTHO05D012028 3.2e-99 365.2 192 100.0
CARHR189050 Cardamine hirsuta HOM05D009945 ORTHO05D012028 6.3e-63 244.6 190 70.5
AT3G49330 Arabidopsis thaliana HOM05D009945 ORTHO05D012028 4.0e-25 119.0 184 41.8
AL5G29080 Arabidopsis lyrata HOM05D009945 ORTHO05D012028 2.0e-24 116.7 177 41.2
Aa31LG4G17890 Aethionema arabicum HOM05D009945 ORTHO05D012028 5.7e-24 115.2 185 40.0
BcaB01g00725 Brassica carinata HOM05D009945 ORTHO05D012028 3.7e-23 112.5 177 40.7
BcaC07g39401 Brassica carinata HOM05D009945 ORTHO05D012028 4.1e-22 109.0 177 39.5
C08p24330 Brassica napus HOM05D009945 ORTHO05D012028 4.1e-22 109.0 177 39.5
BolC8t50051H Brassica oleracea HOM05D009945 ORTHO05D012028 4.1e-22 109.0 177 39.5
CARHR158270 Cardamine hirsuta HOM05D009945 ORTHO05D012028 4.1e-22 109.0 177 39.5
BcaC07g39575 Brassica carinata HOM05D009945 ORTHO05D012028 7.0e-22 108.2 177 39.5
C08p26270 Brassica napus HOM05D009945 ORTHO05D012028 7.0e-22 108.2 177 39.5
BolC8t50245H Brassica oleracea HOM05D009945 ORTHO05D012028 7.0e-22 108.2 177 39.5
A06p18400 Brassica napus HOM05D009945 ORTHO05D012028 9.1e-22 107.8 177 39.0
BraA06t24921Z Brassica rapa HOM05D009945 ORTHO05D012028 9.1e-22 107.8 177 39.0
Carub.0005s1557 Capsella rubella HOM05D009945 ORTHO05D012028 2.7e-21 106.3 172 40.1
Sp5g12740 Schrenkiella parvula HOM05D009945 ORTHO05D012028 3.5e-21 105.9 177 38.4
THA.LOC104814943 Tarenaya hassleriana HOM05D009945 ORTHO05D012028 1.3e-20 104.0 170 37.6
CARHR054870 Cardamine hirsuta HOM05D009945 ORTHO05D012028 5.2e-17 92.0 178 32.6
Sp2g06070 Schrenkiella parvula HOM05D009945 ORTHO05D012028 5.2e-17 92.0 181 33.1
Sp2g06060 Schrenkiella parvula HOM05D009945 ORTHO05D012028 1.5e-16 90.5 181 32.0
AT1G56620 Arabidopsis thaliana HOM05D009945 ORTHO05D012028 6.3e-15 85.1 177 33.3
CARHR054860 Cardamine hirsuta HOM05D009945 ORTHO05D012028 6.3e-15 85.1 153 32.7
AL1G66610 Arabidopsis lyrata HOM05D009945 ORTHO05D012028 1.6e-10 70.5 117 37.6
MD12G1203400 Malus domestica HOM05D008339 ORTHO05D009712 2.0e-08 63.5 125 30.4
Haze_04054 Corylus avellana HOM05D008339 ORTHO05D009712 2.4e-06 56.6 142 27.5
Thecc.05G309700 Theobroma cacao HOM05D008339 ORTHO05D009712 3.2e-06 56.2 121 31.4


User provided reference genes

Program Settings