Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G23575 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 0.0e+00 1201.0 594 100.0
AL6G34865 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 0.0e+00 1184.9 594 98.3
Carub.0006s2135 Capsella rubella HOM05D004337 ORTHO05D005422 0.0e+00 1138.6 596 94.8
Thhalv10003872m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 0.0e+00 1121.7 598 93.5
A09p06870 Brassica napus HOM05D004337 ORTHO05D005422 0.0e+00 1115.5 598 92.1
BcaB04g19858 Brassica carinata HOM05D004337 ORTHO05D005422 0.0e+00 1115.1 597 92.1
BraA09t36334Z Brassica rapa HOM05D004337 ORTHO05D005422 0.0e+00 1112.4 596 92.1
CARHR189960 Cardamine hirsuta HOM05D004337 ORTHO05D005422 0.0e+00 1112.4 596 93.0
A06p34530 Brassica napus HOM05D004337 ORTHO05D005422 0.0e+00 1107.0 598 91.6
C09p07600 Brassica napus HOM05D004337 ORTHO05D005422 0.0e+00 1104.7 598 91.6
BraA06t26382Z Brassica rapa HOM05D004337 ORTHO05D005422 0.0e+00 1103.2 598 91.3
C07p43970 Brassica napus HOM05D004337 ORTHO05D005422 0.0e+00 1100.9 600 91.2
BolC7t44925H Brassica oleracea HOM05D004337 ORTHO05D005422 0.0e+00 1099.7 596 91.3
BolC9t53677H Brassica oleracea HOM05D004337 ORTHO05D005422 0.0e+00 1099.0 600 91.0
Sp2g23620 Schrenkiella parvula HOM05D004337 ORTHO05D005422 0.0e+00 1097.0 599 90.8
BcaC04g23504 Brassica carinata HOM05D004337 ORTHO05D005422 0.0e+00 1095.9 601 90.7
Aa31LG11G2980 Aethionema arabicum HOM05D004337 ORTHO05D005422 6.9e-302 1040.0 597 86.6
AL6G19170 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.3e-295 1019.2 594 83.8
Carub.0006s0742 Capsella rubella HOM05D004337 ORTHO05D005422 2.4e-294 1015.0 597 83.6
CARHR204490 Cardamine hirsuta HOM05D004337 ORTHO05D005422 3.1e-294 1014.6 600 84.2
Thhalv10013045m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 9.0e-294 1013.1 600 84.2
Aa31LG3G18040 Aethionema arabicum HOM05D004337 ORTHO05D005422 4.3e-288 994.2 596 83.2
BraA10t44874Z Brassica rapa HOM05D004337 ORTHO05D005422 9.6e-288 993.0 602 82.7
BcaB08g37252 Brassica carinata HOM05D004337 ORTHO05D005422 1.1e-286 989.6 605 82.0
BolC9t59595H Brassica oleracea HOM05D004337 ORTHO05D005422 2.4e-286 988.4 603 82.3
C09p68510 Brassica napus HOM05D004337 ORTHO05D005422 6.9e-286 986.9 602 82.2
A10p28250 Brassica napus HOM05D004337 ORTHO05D005422 9.3e-283 976.5 598 81.3
THA.LOC104818397 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 1.5e-272 942.6 599 78.6
THA.LOC104819366 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 1.9e-272 942.2 603 77.6
Sp6g34400 Schrenkiella parvula HOM05D004337 ORTHO05D005422 4.8e-271 937.6 602 79.6
AT5G08500 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 1.9e-267 925.6 518 87.1
Manes.12G081000 Manihot esculenta HOM05D004337 ORTHO05D005422 5.3e-262 907.5 568 76.8
CiPaw.15G184900 Carya illinoinensis HOM05D004337 ORTHO05D005422 6.9e-262 907.1 595 74.1
MD15G1140200 Malus domestica HOM05D004337 ORTHO05D005422 9.1e-262 906.7 602 73.3
Gohir.D04G040600 Gossypium hirsutum HOM05D004337 ORTHO05D005422 1.2e-261 906.4 569 76.6
Gorai.012G045800 Gossypium raimondii HOM05D004337 ORTHO05D005422 1.2e-261 906.4 569 76.6
Gohir.A05G375100 Gossypium hirsutum HOM05D004337 ORTHO05D005422 1.5e-261 906.0 569 76.6
Prupe.4G286100 Prunus persica HOM05D004337 ORTHO05D005422 3.4e-261 904.8 596 74.7
Cfa020919 Carpinus fangiana HOM05D004337 ORTHO05D005422 1.0e-260 903.3 599 74.6
Potri.T045800 Populus trichocarpa HOM05D004337 ORTHO05D005422 2.9e-260 901.7 568 76.8
Potri.004G134500 Populus trichocarpa HOM05D004337 ORTHO05D005422 5.0e-260 901.0 568 76.9
Potri.018G137500 Populus trichocarpa HOM05D004337 ORTHO05D005422 8.5e-260 900.2 568 76.6
Ciclev10025224m.g Citrus clementina HOM05D004337 ORTHO05D005422 1.4e-259 899.4 570 76.0
TAR376G0777 Trochodendron aralioides HOM05D004337 ORTHO05D005422 1.9e-259 899.0 596 73.2
Gohir.A12G002300 Gossypium hirsutum HOM05D004337 ORTHO05D005422 2.5e-259 898.7 568 75.7
Thecc.01G146600 Theobroma cacao HOM05D004337 ORTHO05D005422 2.5e-259 898.7 571 75.1
AL6G18970 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 3.2e-259 898.3 888 56.0
QL10p037473 Quercus lobata HOM05D004337 ORTHO05D005422 3.2e-259 898.3 573 75.2
unitig_736.g22365 Utricularia gibba HOM05D004337 ORTHO05D005422 4.7e-258 894.4 582 73.9
Sabra04G0083600 Salix brachista HOM05D004337 ORTHO05D005422 1.8e-257 892.5 596 73.2
GSVIVG01000243001 Vitis vinifera HOM05D004337 ORTHO05D005422 1.8e-257 892.5 597 74.2
Hma1.2p1_0296F.1_g116900 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 3.9e-257 891.3 569 76.1
Zm00001eb082160 Zea mays HOM05D004337 ORTHO05D005422 5.1e-257 891.0 609 71.9
Sopen05g034740 Solanum pennellii HOM05D004337 ORTHO05D005422 1.5e-256 889.4 597 72.4
Atru.chr3.1466 Acer truncatum HOM05D004337 ORTHO05D005422 2.0e-256 889.0 600 73.3
Dinv09624 Davidia involucrata HOM05D004337 ORTHO05D005422 3.3e-256 888.3 596 73.5
Gorai.008G001400 Gossypium raimondii HOM05D004337 ORTHO05D005422 3.3e-256 888.3 601 72.2
Solyc05g056350.3 Solanum lycopersicum HOM05D004337 ORTHO05D005422 5.7e-256 887.5 597 72.2
Actinidia36582 Actinidia chinensis HOM05D004337 ORTHO05D005422 1.3e-255 886.3 576 74.5
MELO3C003282.2 Cucumis melo HOM05D004337 ORTHO05D005422 2.8e-255 885.2 576 74.3
arahy.Tifrunner.gnm1.ann1.X1BSDH Arachis hypogaea HOM05D004337 ORTHO05D005422 4.8e-255 884.4 580 74.0
CANSAT54G2432 Cannabis sativa HOM05D004337 ORTHO05D005422 8.2e-255 883.6 576 73.8
Aqoxy5G01850 Aquilegia oxysepala HOM05D004337 ORTHO05D005422 1.1e-254 883.2 592 72.8
PGSC0003DMG400023451 Solanum tuberosum HOM05D004337 ORTHO05D005422 3.1e-254 881.7 604 71.7
Lsat_1_v5_gn_2_40441 Lactuca sativa HOM05D004337 ORTHO05D005422 5.3e-254 880.9 596 72.5
MSTRG.23236 Avicennia marina HOM05D004337 ORTHO05D005422 7.0e-254 880.6 572 74.0
MBI06_g32147_MAGBIO Magnolia biondii HOM05D004337 ORTHO05D005422 7.0e-254 880.6 553 75.2
ECA238G0122 Erigeron canadensis HOM05D004337 ORTHO05D005422 9.1e-254 880.2 600 72.0
Lalb_Chr12g0202711 Lupinus albus HOM05D004337 ORTHO05D005422 9.1e-254 880.2 598 72.4
Oeu046358.1 Olea europaea HOM05D004337 ORTHO05D005422 2.6e-253 878.6 595 72.3
Nitab4.5_0000496g0240 Nicotiana tabacum HOM05D004337 ORTHO05D005422 3.5e-253 878.2 553 75.9
CAN.G1156.26 Capsicum annuum HOM05D004337 ORTHO05D005422 4.5e-253 877.9 567 74.6
Hund21761 Selenicereus undatus HOM05D004337 ORTHO05D005422 4.5e-253 877.9 594 71.9
FvH4_1g25770 Fragaria vesca HOM05D004337 ORTHO05D005422 5.9e-253 877.5 604 72.2
PGR119G0424 Punica granatum HOM05D004337 ORTHO05D005422 1.0e-252 876.7 574 75.4
PSO761G0180 Papaver somniferum HOM05D004337 ORTHO05D005422 1.3e-252 876.3 599 72.8
CsaV3_4G030000 Cucumis sativus L. HOM05D004337 ORTHO05D005422 2.2e-252 875.5 569 74.2
FAN28G1720 Fragaria x ananassa HOM05D004337 ORTHO05D005422 5.0e-252 874.4 621 70.4
PSO210G2848 Papaver somniferum HOM05D004337 ORTHO05D005422 5.0e-252 874.4 605 72.1
Os04g0441900 Oryza sativa ssp. japonica HOM05D004337 ORTHO05D005422 6.5e-252 874.0 556 75.2
FAN26G1467 Fragaria x ananassa HOM05D004337 ORTHO05D005422 8.5e-252 873.6 621 70.4
Nitab4.5_0004764g0030 Nicotiana tabacum HOM05D004337 ORTHO05D005422 8.5e-252 873.6 558 75.6
Peaxi162Scf00353g00735 Petunia axillaris HOM05D004337 ORTHO05D005422 8.5e-252 873.6 576 73.8
VMungo1309G0234 Vigna mungo HOM05D004337 ORTHO05D005422 1.1e-251 873.2 596 72.7
EL10Ac4g09743 Beta vulgaris HOM05D004337 ORTHO05D005422 1.5e-251 872.8 587 72.7
FAN23G1824 Fragaria x ananassa HOM05D004337 ORTHO05D005422 2.5e-251 872.1 621 70.4
Oeu054207.1 Olea europaea HOM05D004337 ORTHO05D005422 2.5e-251 872.1 592 72.3
Lalb_Chr07g0183961 Lupinus albus HOM05D004337 ORTHO05D005422 3.2e-251 871.7 598 71.7
Psat5g057120 Pisum sativum HOM05D004337 ORTHO05D005422 4.2e-251 871.3 587 72.6
RcHm_v2.0_Chr3g0484771 Rosa chinensis HOM05D004337 ORTHO05D005422 4.2e-251 871.3 607 71.3
SGA_v2.0_scaffold12G06278 Striga asiatica HOM05D004337 ORTHO05D005422 4.2e-251 871.3 591 72.8
Zm00001eb422980 Zea mays HOM05D004337 ORTHO05D005422 4.2e-251 871.3 605 70.9
Sed0025757 Sechium edule HOM05D004337 ORTHO05D005422 1.2e-250 869.8 570 74.0
Migut.H02542 Erythranthe guttata HOM05D004337 ORTHO05D005422 1.6e-250 869.4 599 71.8
Sc16g0009860 Simmondsia chinensis HOM05D004337 ORTHO05D005422 2.1e-250 869.0 553 74.7
COL.COLO4_33529 Corchorus olitorius HOM05D004337 ORTHO05D005422 4.7e-250 867.8 570 74.2
Eucgr.I00018 Eucalyptus grandis HOM05D004337 ORTHO05D005422 1.0e-249 866.7 569 73.6
FAN19G0301 Fragaria x ananassa HOM05D004337 ORTHO05D005422 1.4e-249 866.3 621 70.0
TPR.G7800 Trifolium pratense HOM05D004337 ORTHO05D005422 1.8e-249 865.9 600 70.7
AUR62006971 Chenopodium quinoa HOM05D004337 ORTHO05D005422 3.0e-249 865.1 619 69.5
Glyma.04G203800 Glycine max HOM05D004337 ORTHO05D005422 6.7e-249 864.0 595 72.3
Medtr3g098210 Medicago truncatula HOM05D004337 ORTHO05D005422 6.7e-249 864.0 598 70.7
Phvul.009G159800 Phaseolus vulgaris HOM05D004337 ORTHO05D005422 1.1e-248 863.2 603 71.6
AUR62000615 Chenopodium quinoa HOM05D004337 ORTHO05D005422 1.5e-248 862.8 619 69.3
Lj1g0000957 Lotus japonicus HOM05D004337 ORTHO05D005422 2.6e-248 862.1 603 71.6
TWI75G1462 Tripterygium wilfordii HOM05D004337 ORTHO05D005422 2.6e-248 862.1 572 72.0
Actinidia19947 Actinidia chinensis HOM05D004337 ORTHO05D005422 9.7e-248 860.1 570 73.3
Glyma.06G161400 Glycine max HOM05D004337 ORTHO05D005422 1.3e-247 859.8 583 72.6
Ca_17042_v3 Cicer arietinum L. HOM05D004337 ORTHO05D005422 2.2e-247 859.0 597 71.2
Oeu017633.3 Olea europaea HOM05D004337 ORTHO05D005422 1.1e-246 856.7 568 72.5
ATR1089G072 Amborella trichopoda HOM05D004337 ORTHO05D005422 1.8e-246 855.9 573 71.9
Rhsim10G0124700 Rhododendron simsii HOM05D004337 ORTHO05D005422 4.5e-245 851.3 703 62.7
HPP92_009218 Vanilla planifolia HOM05D004337 ORTHO05D005422 7.7e-245 850.5 601 70.5
HanXRQChr10g0285831 Helianthus annuus HOM05D004337 ORTHO05D005422 2.9e-244 848.6 537 75.2
SGA_v2.0_scaffold51G18842 Striga asiatica HOM05D004337 ORTHO05D005422 1.5e-243 846.3 570 73.9
arahy.Tifrunner.gnm1.ann1.397MFZ Arachis hypogaea HOM05D004337 ORTHO05D005422 1.9e-243 845.9 615 68.9
Nn5g27210 Nelumbo nucifera HOM05D004337 ORTHO05D005422 4.0e-241 838.2 546 74.5
Lj4A821G42 Lonicera japonica HOM05D004337 ORTHO05D005422 1.5e-240 836.3 554 73.6
Peaxi162Scf00651g00114 Petunia axillaris HOM05D004337 ORTHO05D005422 1.3e-236 823.2 599 68.9
DCAR_009619 Daucus carota HOM05D004337 ORTHO05D005422 9.4e-235 817.0 611 68.1
SMO116G0204 Selaginella moellendorffii HOM05D004337 ORTHO05D005422 1.0e-228 797.0 542 69.9
Dinv10851 Davidia involucrata HOM05D004337 ORTHO05D005422 2.8e-226 788.9 519 74.8
Mapoly0020s0073 Marchantia polymorpha HOM05D004337 ORTHO05D005422 3.0e-225 785.4 579 66.5
CSS0021638 Camellia sinensis var. sinensis HOM05D004337 ORTHO05D005422 2.3e-217 759.2 496 74.6
vmacro12739 Vaccinium macrocarpon HOM05D004337 ORTHO05D005422 5.4e-214 748.0 933 46.7
Pp3c5_10010 Physcomitrium patens HOM05D004337 ORTHO05D005422 7.5e-208 727.6 602 59.8
Gohir.D12G002000 Gossypium hirsutum HOM05D004337 ORTHO05D005422 1.5e-195 686.8 568 61.1
Duzib264G1201 Durio zibethinus HOM05D004337 ORTHO05D005422 6.9e-193 677.9 569 60.8
Cc00_g00820 Coffea canephora HOM05D004337 ORTHO05D005422 6.0e-189 664.8 400 79.8
Ah.06g188230 Amaranthus hybridus HOM05D004337 ORTHO05D005422 1.0e-188 664.1 541 63.6
CBR_g44530 Chara braunii HOM05D004337 ORTHO05D005422 6.6e-188 661.4 566 56.9
AL6G18990 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 5.3e-185 651.7 433 78.5
CDE05G2996 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 1.0e-180 637.5 467 65.7
Haze_19353 Corylus avellana HOM05D004337 ORTHO05D005422 8.7e-164 581.3 340 84.1
Cre09.g397900 Chlamydomonas reinhardtii HOM05D004337 ORTHO05D005422 2.2e-154 550.1 565 51.3
AL6G19200 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 2.2e-151 540.0 443 68.8
SHI38349 Sapria himalayana HOM05D004337 ORTHO05D005422 1.1e-150 537.7 419 66.3
ClCG04G002690 Citrullus lanatus HOM05D004337 ORTHO05D005422 6.7e-132 475.3 307 76.5
MCO10G243 Micromonas commoda HOM05D004337 ORTHO05D005422 6.8e-116 422.2 345 58.6
Haze_27034 Corylus avellana HOM05D004337 ORTHO05D005422 9.8e-107 391.7 450 44.9
Cfa024513 Carpinus fangiana HOM05D004337 ORTHO05D005422 1.7e-98 364.4 515 40.2
PRCOL_00006172 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 1.9e-94 350.9 469 41.2
AL6G19020 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 1.5e-83 314.7 221 72.4
Cpa.g.sc138.38 Carica papaya HOM05D004337 ORTHO05D005422 1.5e-78 298.1 245 61.2
Cpa.g.sc3593.1 Carica papaya HOM05D004337 ORTHO05D005422 7.3e-78 295.8 176 80.7
MCO07G426 Micromonas commoda HOM05D004337 ORTHO05D005422 1.1e-73 282.0 409 40.1
Haze_19352 Corylus avellana HOM05D004337 ORTHO05D005422 1.0e-71 275.4 233 59.2
SalBow8G1257 Salvia bowleyana HOM05D004337 ORTHO05D005422 1.3e-66 258.5 229 55.5
SalBow8G3722 Salvia bowleyana HOM05D004337 ORTHO05D005422 1.3e-66 258.5 229 55.5
PRCOL_00005640 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 3.9e-63 246.9 365 35.3
Cc00_g00810 Coffea canephora HOM05D004337 ORTHO05D005422 1.5e-62 245.0 171 66.1
ClCG04G002680 Citrullus lanatus HOM05D004337 ORTHO05D005422 8.7e-55 219.2 164 61.6
HPP92_009290 Vanilla planifolia HOM05D004337 ORTHO05D005422 6.3e-45 186.4 230 47.4
CDE05G3583 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 9.0e-44 182.6 108 85.2
BcaC04g21668 Brassica carinata HOM05D004337 ORTHO05D021976 2.2e-29 134.8 168 47.6
C09p29160 Brassica napus HOM05D004337 ORTHO05D021976 3.7e-29 134.0 164 48.2
Hma1.2p1_0641F.1_g194250 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 3.1e-28 131.0 72 83.3
Psat3g077400 Pisum sativum HOM05D004337 ORTHO05D005422 3.3e-22 110.9 112 50.0
Hma1.2p1_0641F.1_g194230 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 3.2e-17 94.4 105 52.4
SEGI_12766 Sequoiadendron giganteum HOM05D004337 ORTHO05D005422 5.2e-15 87.0 43 86.0
AUR62044487 Chenopodium quinoa HOM05D004337 ORTHO05D021976 5.7e-14 83.6 49 73.5
AUR62044516 Chenopodium quinoa HOM05D004337 ORTHO05D021976 5.7e-14 83.6 49 73.5
CDE05G0837 Ceratophyllum demersum HOM05D004337 ORTHO05D043897 4.1e-12 77.4 75 52.0
AUR62038356 Chenopodium quinoa HOM05D001477 ORTHO05D021976 5.9e-11 73.6 42 76.2
SHI11402 Sapria himalayana HOM05D000039 ORTHO05D006865 3.8e-10 70.9 48 62.5
CARHR148430 Cardamine hirsuta HOM05D004337 ORTHO05D116339 4.7e-08 63.9 51 72.5


User provided reference genes

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