Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G22970 Arabidopsis thaliana HOM05D008865 ORTHO05D011106 3.7e-79 298.1 147 100.0
AL6G34100 Arabidopsis lyrata HOM05D008865 ORTHO05D011106 1.1e-59 233.4 138 81.2
Carub.0006s2074 Capsella rubella HOM05D008865 ORTHO05D011106 6.7e-41 171.0 136 64.0
CARHR190570 Cardamine hirsuta HOM05D008865 ORTHO05D011106 7.0e-38 161.0 137 62.0
Carub.0008s2070 Capsella rubella HOM05D008865 ORTHO05D011106 1.9e-35 152.9 150 54.0
AT5G60000 Arabidopsis thaliana HOM05D008865 ORTHO05D011106 5.2e-33 144.8 148 52.0
AL8G36590 Arabidopsis lyrata HOM05D008865 ORTHO05D011106 2.0e-32 142.9 139 51.8
BraA10t43880Z Brassica rapa HOM05D008865 ORTHO05D011106 1.8e-30 136.3 154 52.6
BcaC04g19616 Brassica carinata HOM05D008865 ORTHO05D011106 2.0e-29 132.9 154 51.3
C09p53610 Brassica napus HOM05D008865 ORTHO05D011106 2.0e-29 132.9 154 51.3
BolC9t58237H Brassica oleracea HOM05D008865 ORTHO05D011106 2.0e-29 132.9 154 51.3
BraA06t24016Z Brassica rapa HOM05D008865 ORTHO05D011106 5.9e-29 131.3 153 51.0
A10p18060 Brassica napus HOM05D008865 ORTHO05D011106 1.0e-28 130.6 154 51.3
Thhalv10015539m.g Eutrema salsugineum HOM05D008865 ORTHO05D011106 3.8e-28 128.6 153 53.6
BcaB08g36386 Brassica carinata HOM05D008865 ORTHO05D011106 5.0e-28 128.3 155 51.6
BcaB08g36388 Brassica carinata HOM05D008865 ORTHO05D011106 5.0e-28 128.3 155 51.6
BcaB08g36389 Brassica carinata HOM05D008865 ORTHO05D011106 5.0e-28 128.3 155 51.6
A03p10990 Brassica napus HOM05D008865 ORTHO05D011106 2.2e-23 112.8 153 45.8
BraA03t10412Z Brassica rapa HOM05D008865 ORTHO05D011106 2.2e-23 112.8 153 45.8
BraA03t10413Z Brassica rapa HOM05D008865 ORTHO05D011106 2.2e-23 112.8 153 45.8
A03p11010 Brassica napus HOM05D008865 ORTHO05D011106 1.8e-22 109.8 153 45.1
BraA03t10408Z Brassica rapa HOM05D008865 ORTHO05D011106 1.8e-22 109.8 145 47.6
Sp6g22410 Schrenkiella parvula HOM05D008865 ORTHO05D011106 7.0e-22 107.8 149 46.3
BcaB01g04681 Brassica carinata HOM05D008865 ORTHO05D011106 2.7e-21 105.9 153 47.1
Aa31LG7G12520 Aethionema arabicum HOM05D008865 ORTHO05D011106 5.9e-21 104.8 145 43.4
BcaB01g04678 Brassica carinata HOM05D008865 ORTHO05D011106 1.7e-20 103.2 146 47.9
BcaC01g06558 Brassica carinata HOM05D008865 ORTHO05D011106 2.3e-20 102.8 153 43.8
C03p12650 Brassica napus HOM05D008865 ORTHO05D011106 2.3e-20 102.8 153 43.8
C03p12670 Brassica napus HOM05D008865 ORTHO05D011106 2.3e-20 102.8 153 43.8
BolC3t13733H Brassica oleracea HOM05D008865 ORTHO05D011106 2.3e-20 102.8 153 43.8
THA.LOC104811283 Tarenaya hassleriana HOM05D008865 ORTHO05D011106 7.5e-16 87.8 123 39.8
BraA03t10415Z Brassica rapa HOM05D008865 ORTHO05D011106 2.2e-15 86.3 72 65.3
A03p10980 Brassica napus HOM05D008865 ORTHO05D011106 8.3e-15 84.3 70 65.7
BraA03t10409Z Brassica rapa HOM05D008865 ORTHO05D011106 8.3e-15 84.3 70 65.7
BolC3t13736H Brassica oleracea HOM05D008865 ORTHO05D011106 1.6e-13 80.1 72 61.1
C03p12700 Brassica napus HOM05D008865 ORTHO05D011106 4.5e-13 78.6 72 61.1
BcaC01g06556 Brassica carinata HOM05D008865 ORTHO05D011106 3.3e-11 72.4 93 48.4
Aa31sc23G400 Aethionema arabicum HOM05D008865 ORTHO05D011106 2.8e-10 69.3 68 58.8
Thecc.09G331500 Theobroma cacao HOM05D008865 ORTHO05D011106 3.2e-06 55.8 141 30.5


User provided reference genes

Program Settings