Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 3.7e-120 434.9 219 100.0
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 1.4e-114 416.4 219 95.4
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 8.1e-107 390.6 221 89.6
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 2.3e-106 389.0 219 88.6
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 4.9e-104 381.3 221 87.3
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 1.9e-103 379.4 219 87.7
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 1.2e-102 376.7 219 86.8
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 1.2e-102 376.7 219 86.8
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 1.2e-102 376.7 219 86.8
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 1.6e-102 376.3 219 86.3
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 7.8e-102 374.0 219 85.8
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 1.2e-99 366.7 220 84.5
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 3.4e-89 332.0 234 74.8
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 8.7e-69 264.2 219 61.2
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 7.4e-60 234.6 220 57.3
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 6.3e-59 231.5 220 56.8
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 5.3e-58 228.4 174 65.5
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 2.0e-57 226.5 173 65.3
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 3.8e-56 222.2 192 58.3
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 1.1e-55 220.7 173 64.2
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 2.5e-55 219.5 192 61.5
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 3.2e-55 219.2 172 62.2
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 5.5e-55 218.4 175 65.1
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 9.3e-55 217.6 216 54.6
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 4.6e-54 215.3 222 52.3
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 1.0e-53 214.2 174 62.6
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 1.3e-53 213.8 174 63.8
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 2.3e-53 213.0 174 64.9
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 5.1e-53 211.8 173 59.5
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 5.1e-53 211.8 226 51.8
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 5.1e-53 211.8 173 61.3
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 6.7e-53 211.5 176 61.9
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 6.7e-53 211.5 173 59.5
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 1.1e-52 210.7 217 50.7
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 1.9e-52 209.9 217 51.6
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 4.3e-52 208.8 195 55.9
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 9.7e-52 207.6 220 52.3
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 9.7e-52 207.6 183 53.6
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 8.2e-51 204.5 183 54.6
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 8.2e-51 204.5 183 55.7
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 8.2e-51 204.5 207 54.6
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 1.4e-50 203.8 192 56.2
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 6.9e-50 201.4 200 53.5
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 6.9e-50 201.4 194 54.6
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 9.1e-50 201.1 194 55.2
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 9.1e-50 201.1 194 53.6
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 1.5e-49 200.3 178 57.9
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 3.4e-49 199.1 194 54.1
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 3.4e-49 199.1 200 50.5
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 4.5e-49 198.7 152 61.8
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 4.5e-49 198.7 173 59.0
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 5.9e-49 198.4 174 59.8
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 7.7e-49 198.0 227 49.3
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 1.7e-48 196.8 201 53.2
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 5.0e-48 195.3 199 53.3
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 5.0e-48 195.3 202 51.0
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 1.4e-47 193.7 177 55.9
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 1.9e-47 193.4 185 55.1
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 5.5e-47 191.8 184 54.9
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 5.5e-47 191.8 163 60.1
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 7.2e-47 191.4 180 52.2
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 7.2e-47 191.4 190 55.8
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 1.2e-46 190.7 213 50.7
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 2.1e-46 189.9 180 52.2
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 1.0e-45 187.6 127 66.9
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 1.4e-45 187.2 171 55.6
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.4e-45 187.2 177 52.0
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 5.1e-45 185.3 160 56.9
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.5e-44 183.7 199 47.7
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 1.5e-44 183.7 197 51.3
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 7.4e-44 181.4 180 52.2
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 1.3e-43 180.6 165 55.8
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 2.8e-43 179.5 165 53.3
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 3.7e-43 179.1 165 52.7
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 4.8e-43 178.7 187 49.7
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 6.3e-43 178.3 162 52.5
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 8.2e-43 177.9 288 40.3
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 8.2e-43 177.9 169 55.6
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 3.1e-42 176.0 143 58.0
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 4.1e-42 175.6 171 56.1
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 1.0e-40 171.0 177 53.7
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 1.7e-40 170.2 166 54.2
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 5.0e-40 168.7 160 55.0
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 8.5e-40 167.9 169 50.9
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 5.5e-39 165.2 140 57.9
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 3.6e-38 162.5 149 54.4
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 3.0e-37 159.5 127 59.8
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 8.8e-37 157.9 155 53.5
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 1.1e-36 157.5 140 59.3
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 6.3e-35 151.8 200 43.0
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 7.0e-34 148.3 149 51.0
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 1.2e-33 147.5 152 50.7
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 3.0e-21 106.3 186 37.6
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 5.7e-20 102.1 171 40.4
BNapus_Darmor_BZH_scaffold_38p01020 Brassica napus HOM05D007388 ORTHO05D009421 1.3e-19 100.9 66 75.8
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 1.3e-19 100.9 99 55.6
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 3.5e-17 92.8 199 32.7
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 5.9e-17 92.0 176 34.1
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 3.4e-12 76.3 200 29.5
BolC2t07114H Brassica oleracea HOM05D007388 ORTHO05D043137 4.3e-07 59.3 56 57.1


User provided reference genes

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