Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 1.6e-103 379.4 189 100.0
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 1.0e-102 376.7 189 98.9
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 1.7e-100 369.4 189 96.3
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 6.5e-97 357.5 189 92.6
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 1.5e-96 356.3 189 94.2
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 3.6e-95 351.7 189 92.1
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 4.0e-94 348.2 189 92.1
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 4.0e-94 348.2 189 91.0
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 1.2e-93 346.7 189 90.5
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 2.6e-93 345.5 189 90.5
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 2.6e-93 345.5 189 90.5
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 5.9e-90 334.3 189 84.7
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 1.0e-89 333.6 195 86.7
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 3.7e-84 315.1 189 82.5
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 5.2e-78 294.7 189 73.5
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 8.9e-78 293.9 189 73.0
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 2.2e-76 289.3 189 72.0
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 2.4e-75 285.8 189 71.4
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 2.4e-75 285.8 177 81.4
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 9.2e-75 283.9 189 74.1
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 2.7e-74 282.3 189 72.5
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.3e-73 280.0 189 73.0
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 2.9e-73 278.9 189 72.5
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 5.0e-73 278.1 189 70.9
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 5.0e-73 278.1 189 72.5
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 6.6e-73 277.7 189 72.5
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 8.6e-73 277.3 189 72.0
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 9.5e-72 273.9 193 70.5
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 1.6e-71 273.1 190 68.9
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 1.6e-71 273.1 189 69.3
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 2.1e-71 272.7 189 69.8
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 4.0e-70 268.5 189 66.7
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 6.8e-70 267.7 186 68.8
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 6.8e-70 267.7 185 70.3
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 1.5e-69 266.5 194 66.5
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 3.4e-69 265.4 223 61.9
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 5.8e-69 264.6 189 67.2
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 7.5e-69 264.2 189 67.2
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 2.9e-68 262.3 194 65.5
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 6.4e-68 261.2 195 65.1
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 8.3e-68 260.8 189 66.1
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.9e-67 259.6 189 66.7
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 1.9e-67 259.6 195 66.7
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 4.1e-67 258.5 195 67.7
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 1.2e-66 256.9 189 66.1
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 3.5e-66 255.4 188 64.9
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 3.5e-66 255.4 195 66.2
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 7.8e-66 254.2 190 65.3
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 8.6e-65 250.8 188 67.0
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 1.1e-64 250.4 195 62.6
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 2.5e-64 249.2 190 63.7
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 7.3e-64 247.7 189 64.6
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 2.8e-63 245.7 251 52.2
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.8e-62 243.0 191 62.3
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 3.1e-62 242.3 188 66.0
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 4.0e-62 241.9 186 61.8
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 4.0e-62 241.9 191 61.8
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 1.2e-61 240.4 192 64.1
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 1.7e-60 236.5 191 61.3
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 1.7e-60 236.5 183 63.4
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 2.9e-60 235.7 189 61.4
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 2.9e-60 235.7 190 64.2
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 2.9e-60 235.7 190 64.2
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 3.7e-60 235.3 189 64.0
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 3.7e-60 235.3 189 60.8
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 1.1e-59 233.8 190 60.5
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 1.4e-59 233.4 188 63.8
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 3.2e-59 232.3 190 60.0
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 3.2e-59 232.3 200 62.0
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 4.1e-59 231.9 189 60.8
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 5.4e-59 231.5 192 58.9
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 2.1e-58 229.6 191 62.8
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 2.1e-58 229.6 191 59.2
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 3.5e-58 228.8 200 61.5
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 1.0e-57 227.3 150 70.0
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 1.7e-57 226.5 191 62.3
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 1.7e-57 226.5 189 59.3
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 2.3e-57 226.1 190 59.5
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 3.0e-57 225.7 188 62.8
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 3.0e-57 225.7 188 62.8
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 3.9e-57 225.3 192 58.3
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 8.6e-57 224.2 188 62.2
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 1.1e-56 223.8 188 62.2
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 3.3e-56 222.2 189 59.8
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 3.3e-56 222.2 192 60.4
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 7.3e-56 221.1 159 67.3
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 2.8e-55 219.2 188 61.7
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 3.1e-54 215.7 191 56.5
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 6.8e-54 214.5 184 60.9
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 5.8e-53 211.5 190 59.5
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 1.3e-52 210.3 142 69.0
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 6.4e-52 208.0 151 66.9
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 8.3e-52 207.6 190 54.2
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 1.3e-49 200.3 190 56.8
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 1.5e-48 196.8 156 60.3
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 2.5e-48 196.1 140 67.1
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 3.6e-47 192.2 169 58.0
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 8.1e-47 191.0 161 57.8
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 1.1e-43 180.6 145 62.8
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 1.5e-40 170.2 190 50.5
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 4.4e-37 158.7 190 48.9
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 3.8e-36 155.6 143 53.1
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 9.3e-35 151.0 189 45.5
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.1e-34 149.8 117 65.0
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 1.1e-32 144.1 185 44.3
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 4.8e-31 138.7 96 68.8
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 3.1e-30 136.0 87 72.4
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 8.4e-28 127.9 161 44.1
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 2.1e-26 123.2 89 67.4
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 3.5e-26 122.5 177 37.3
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 4.8e-23 112.1 96 55.2
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 1.9e-19 100.1 87 60.9
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 4.2e-19 99.0 166 31.3
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 5.5e-19 98.6 66 74.2
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 1.2e-18 97.4 121 38.0
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 2.5e-16 89.7 75 58.7
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 1.3e-12 77.4 100 46.0
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 5.5e-11 72.0 92 33.7
Cpa.g.sc75.50 Carica papaya HOM05D006513 ORTHO05D008150 1.3e-07 60.8 47 68.1
RcHm_v2.0_Chr7g0212941 Rosa chinensis HOM05D006513 ORTHO05D008150 2.8e-07 59.7 45 66.7
vmacro22116 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.8e-06 57.0 98 37.8
AUR62043674 Chenopodium quinoa HOM05D006513 ORTHO05D003876 2.4e-06 56.6 51 52.9


User provided reference genes

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