Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G20045 Arabidopsis thaliana HOM05D009305 ORTHO05D010439 3.5e-36 154.5 78 100.0
AL6G31590 Arabidopsis lyrata HOM05D009305 ORTHO05D010439 1.0e-32 142.9 76 92.1
BcaB05g22883 Brassica carinata HOM05D009305 ORTHO05D010439 2.7e-28 128.3 75 84.0
Thhalv10015177m.g Eutrema salsugineum HOM05D009305 ORTHO05D010439 2.7e-28 128.3 76 82.9
BcaC03g13728 Brassica carinata HOM05D009305 ORTHO05D010439 7.7e-28 126.7 75 82.7
BolC2t07005H Brassica oleracea HOM05D009305 ORTHO05D010439 7.7e-28 126.7 75 82.7
C03p11370 Brassica napus HOM05D009305 ORTHO05D010439 2.2e-27 125.2 76 80.3
CARHR192790 Cardamine hirsuta HOM05D009305 ORTHO05D010439 5.0e-27 124.0 79 81.0
BolC3t13610H Brassica oleracea HOM05D009305 ORTHO05D010439 6.5e-27 123.6 76 78.9
A03p09790 Brassica napus HOM05D009305 ORTHO05D010439 1.1e-26 122.9 76 78.9
BraA03t10294Z Brassica rapa HOM05D009305 ORTHO05D010439 1.1e-26 122.9 76 78.9
BcaB01g04814 Brassica carinata HOM05D009305 ORTHO05D010439 1.5e-26 122.5 76 78.9
A02p05990 Brassica napus HOM05D009305 ORTHO05D010439 3.2e-26 121.3 75 80.0
BraA02t05551Z Brassica rapa HOM05D009305 ORTHO05D010439 3.2e-26 121.3 75 80.0
Carub.0006s1842 Capsella rubella HOM05D009305 ORTHO05D010439 1.4e-21 105.9 78 73.1
Aa31LG1G14180 Aethionema arabicum HOM05D009305 ORTHO05D010439 1.0e-16 89.7 76 63.2
BNapus_Darmor_BZH_scaffold_38p01850 Brassica napus HOM05D009305 ORTHO05D010439 2.2e-14 82.0 72 63.9
THA.LOC104811040 Tarenaya hassleriana HOM05D009305 ORTHO05D010439 5.0e-11 70.9 73 53.4
RcHm_v2.0_Chr2g0089271 Rosa chinensis HOM05D009305 ORTHO05D010439 3.6e-09 64.7 90 43.3
CiPaw.04G169500 Carya illinoinensis HOM05D009305 ORTHO05D010439 6.2e-09 63.9 86 46.5
Prupe.7G238200 Prunus persica HOM05D009305 ORTHO05D010439 6.2e-09 63.9 89 43.8
FAN26G0439 Fragaria x ananassa HOM05D009305 ORTHO05D010439 1.0e-08 63.2 90 44.4
Manes.11G101800 Manihot esculenta HOM05D009305 ORTHO05D010439 1.0e-08 63.2 84 42.9
Atru.chr7.1234 Acer truncatum HOM05D009305 ORTHO05D010439 4.0e-08 61.2 92 45.7
Cfa003337 Carpinus fangiana HOM05D003010 ORTHO05D010439 4.0e-08 61.2 89 43.8
TAR625G0712 Trochodendron aralioides HOM05D003010 ORTHO05D010439 6.8e-08 60.5 88 42.0
QL02p087437 Quercus lobata HOM05D009305 ORTHO05D010439 8.9e-08 60.1 86 41.9
FAN19G2542 Fragaria x ananassa HOM05D009305 ORTHO05D010439 1.2e-07 59.7 90 41.1
Haze_25626 Corylus avellana HOM05D003010 ORTHO05D010439 2.0e-07 58.9 88 43.2
Nn8g39368 Nelumbo nucifera HOM05D003010 ORTHO05D010439 7.5e-07 57.0 89 40.4
arahy.Tifrunner.gnm1.ann1.0EDZ2A Arachis hypogaea HOM05D009305 ORTHO05D010439 1.3e-06 56.2 91 45.1
DCAR_009212 Daucus carota HOM05D000639 ORTHO05D005966 1.7e-06 55.8 85 42.4
Eucgr.C01116 Eucalyptus grandis HOM05D009305 ORTHO05D010439 1.7e-06 55.8 85 41.2
Phvul.003G161400 Phaseolus vulgaris HOM05D009305 ORTHO05D010439 2.2e-06 55.5 80 41.2
PSO339G5114 Papaver somniferum HOM05D003010 ORTHO05D010439 3.7e-06 54.7 89 36.0
PSO801G0586 Papaver somniferum HOM05D003010 ORTHO05D003623 3.7e-06 54.7 89 36.0
Aqoxy7G02055 Aquilegia oxysepala HOM05D003010 ORTHO05D003623 4.9e-06 54.3 85 38.8
Potri.008G015800 Populus trichocarpa HOM05D003010 ORTHO05D010439 6.4e-06 53.9 83 39.8


User provided reference genes

Program Settings