Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 9.6e-239 829.7 403 100.0
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 1.6e-222 775.8 404 93.8
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 4.2e-210 734.6 404 89.9
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 1.6e-209 732.6 405 89.9
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 1.1e-207 726.5 403 88.8
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 3.3e-207 724.9 403 88.6
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 4.3e-207 724.5 403 88.3
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 4.3e-207 724.5 403 88.3
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 3.4e-204 714.9 365 95.1
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 2.9e-195 685.3 368 90.5
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 9.4e-186 653.7 365 88.2
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 7.3e-146 521.2 355 74.6
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 8.4e-118 427.9 240 87.9
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 3.8e-110 402.5 403 51.4
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 5.4e-109 398.7 399 53.1
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 1.0e-107 394.4 399 52.6
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 2.5e-106 389.8 402 52.7
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 4.6e-100 369.0 398 49.7
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 7.9e-100 368.2 398 49.7
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 2.3e-99 366.7 398 49.7
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 2.3e-99 366.7 393 49.9
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 6.7e-99 365.2 399 47.4
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 9.6e-98 361.3 394 50.0
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 2.8e-97 359.8 395 49.9
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 4.8e-97 359.0 398 46.7
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 6.2e-97 358.6 399 47.6
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 1.4e-96 357.5 397 46.3
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 5.3e-96 355.5 372 50.0
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 1.2e-95 354.4 398 47.7
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 1.5e-95 354.0 401 48.1
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 1.0e-94 351.3 405 47.4
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 1.7e-94 350.5 406 45.1
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 1.9e-93 347.1 390 47.7
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 3.2e-93 346.3 395 46.1
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 5.5e-93 345.5 401 47.6
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 7.1e-93 345.1 398 44.5
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 9.3e-93 344.7 396 48.0
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 6.0e-92 342.0 404 45.8
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 6.0e-92 342.0 393 47.1
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 7.9e-92 341.7 405 44.9
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 1.0e-91 341.3 401 46.1
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 1.0e-91 341.3 392 47.2
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 1.8e-91 340.5 393 45.5
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 2.3e-91 340.1 400 45.0
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 5.1e-91 339.0 401 44.9
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 8.7e-91 338.2 400 44.8
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 1.9e-90 337.0 392 45.9
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 5.7e-90 335.5 398 44.5
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 7.4e-90 335.1 392 44.4
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 7.4e-90 335.1 398 44.2
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 6.3e-89 332.0 403 45.7
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 1.1e-88 331.3 395 45.1
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 6.9e-88 328.6 407 43.5
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 1.5e-87 327.4 389 45.0
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 4.5e-87 325.9 392 43.9
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 2.2e-86 323.6 396 43.9
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 4.2e-85 319.3 399 42.4
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 1.8e-80 303.9 360 44.7
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 4.1e-80 302.8 397 42.3
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 5.9e-79 298.9 326 47.5
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 9.4e-77 291.6 326 46.9
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 4.1e-72 276.2 151 90.1
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 3.8e-70 269.6 326 45.7
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 8.0e-68 261.9 329 45.0
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 8.0e-68 261.9 325 43.4
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 1.5e-66 257.7 298 45.0
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 1.0e-62 245.0 394 38.6
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 1.2e-60 238.0 404 35.9
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 1.5e-58 231.1 312 42.6
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 9.7e-58 228.4 383 35.0
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 2.8e-57 226.9 389 36.2
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 9.5e-37 158.7 205 39.0


User provided reference genes

Program Settings