Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G19130 Arabidopsis thaliana HOM05D005666 ORTHO05D007183 0.0e+00 1395.2 700 100.0
AL6G30550 Arabidopsis lyrata HOM05D005666 ORTHO05D007183 0.0e+00 1349.0 700 96.0
Carub.0006s1746 Capsella rubella HOM05D005666 ORTHO05D007183 0.0e+00 1318.9 701 94.2
Thhalv10012831m.g Eutrema salsugineum HOM05D005666 ORTHO05D007183 0.0e+00 1281.9 698 91.0
Sp6g25230 Schrenkiella parvula HOM05D005666 ORTHO05D007183 0.0e+00 1267.7 700 90.0
BraA10t44118Z Brassica rapa HOM05D005666 ORTHO05D007183 0.0e+00 1249.6 701 88.9
A10p20490 Brassica napus HOM05D005666 ORTHO05D007183 0.0e+00 1245.7 701 89.2
BolC9t58577H Brassica oleracea HOM05D005666 ORTHO05D007183 0.0e+00 1245.3 701 89.3
C09p57110 Brassica napus HOM05D005666 ORTHO05D007183 0.0e+00 1244.2 700 89.0
BcaC04g18594 Brassica carinata HOM05D005666 ORTHO05D007183 0.0e+00 1236.5 700 88.6
BcaB08g36600 Brassica carinata HOM05D005666 ORTHO05D007183 0.0e+00 1227.2 693 88.6
Aa31LG11G15280 Aethionema arabicum HOM05D005666 ORTHO05D007183 0.0e+00 1164.4 700 83.7
CARHR193820 Cardamine hirsuta HOM05D005666 ORTHO05D007183 9.7e-255 883.6 477 90.8
BcaB05g23370 Brassica carinata HOM05D005666 ORTHO05D007183 7.2e-250 867.5 693 68.8
THA.LOC104824726 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 4.5e-244 848.2 694 65.4
QL02p074714 Quercus lobata HOM05D005666 ORTHO05D007183 4.2e-242 841.6 712 62.4
Potri.001G345200 Populus trichocarpa HOM05D005666 ORTHO05D007183 3.6e-241 838.6 719 61.8
Sabra16G0224200 Salix brachista HOM05D005666 ORTHO05D007183 3.6e-241 838.6 719 62.0
Cpa.g.sc130.81 Carica papaya HOM05D005666 ORTHO05D007183 6.1e-241 837.8 723 61.8
Atru.chr6.2394 Acer truncatum HOM05D005666 ORTHO05D007183 1.4e-237 826.6 719 60.9
CANSAT64G2468 Cannabis sativa HOM05D005666 ORTHO05D007183 1.4e-237 826.6 711 61.7
Hma1.2p1_0999F.1_g246210 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 7.2e-234 814.3 698 61.9
MD09G1027000 Malus domestica HOM05D005666 ORTHO05D007183 7.2e-234 814.3 706 60.9
Gorai.012G064300 Gossypium raimondii HOM05D005666 ORTHO05D007183 2.1e-233 812.8 717 60.8
Actinidia35772 Actinidia chinensis HOM05D005666 ORTHO05D007183 2.7e-233 812.4 714 60.2
MD17G1027000 Malus domestica HOM05D005666 ORTHO05D007183 8.0e-233 810.8 706 60.9
Gohir.D04G057600 Gossypium hirsutum HOM05D005666 ORTHO05D007183 1.8e-232 809.7 717 60.5
TWI56G0621 Tripterygium wilfordii HOM05D005666 ORTHO05D007183 1.8e-232 809.7 717 59.4
Manes.17G112200 Manihot esculenta HOM05D005666 ORTHO05D007183 3.0e-232 808.9 710 61.0
GSVIVG01032407001 Vitis vinifera HOM05D005666 ORTHO05D007183 6.8e-232 807.7 699 60.8
Rhsim10G0213300 Rhododendron simsii HOM05D005666 ORTHO05D007183 2.2e-230 802.7 708 60.9
Haze_10618 Corylus avellana HOM05D005666 ORTHO05D007183 1.8e-229 799.7 691 61.6
CsaV3_5G027130 Cucumis sativus L. HOM05D005666 ORTHO05D007183 3.1e-229 798.9 711 58.4
Duzib147G1248 Durio zibethinus HOM05D005666 ORTHO05D007183 1.2e-228 797.0 723 59.1
MELO3C021580.2 Cucumis melo HOM05D005666 ORTHO05D007183 2.0e-228 796.2 710 58.0
Glyma.05G003600 Glycine max HOM05D005666 ORTHO05D007183 3.5e-228 795.4 706 58.4
ClCG09G019260 Citrullus lanatus HOM05D005666 ORTHO05D007183 2.9e-227 792.3 716 57.5
RcHm_v2.0_Chr2g0172791 Rosa chinensis HOM05D005666 ORTHO05D007183 8.5e-227 790.8 741 57.0
vmacro18287 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 8.5e-227 790.8 701 60.1
Lj2g0025454 Lotus japonicus HOM05D005666 ORTHO05D007183 4.2e-226 788.5 684 59.9
COL.COLO4_29116 Corchorus olitorius HOM05D005666 ORTHO05D007183 1.2e-225 786.9 742 58.4
Lalb_Chr13g0300491 Lupinus albus HOM05D005666 ORTHO05D007183 1.2e-225 786.9 698 58.5
TAR371G0349 Trochodendron aralioides HOM05D005666 ORTHO05D007183 3.6e-225 785.4 710 58.9
TPR.G14074 Trifolium pratense HOM05D005666 ORTHO05D007183 6.1e-225 784.6 701 58.5
Ciclev10014455m.g Citrus clementina HOM05D005666 ORTHO05D007183 1.0e-224 783.9 698 59.7
Phvul.004G006900 Phaseolus vulgaris HOM05D005666 ORTHO05D007183 1.0e-224 783.9 706 57.9
CiPaw.03G043800 Carya illinoinensis HOM05D005666 ORTHO05D007183 5.2e-224 781.6 711 58.2
Sed0018750 Sechium edule HOM05D005666 ORTHO05D007183 1.2e-223 780.4 710 57.0
Eucgr.L01920 Eucalyptus grandis HOM05D005666 ORTHO05D007183 2.0e-223 779.6 712 58.1
Lalb_Chr12g0199101 Lupinus albus HOM05D005666 ORTHO05D007183 2.0e-223 779.6 698 58.6
FAN14G3607 Fragaria x ananassa HOM05D005666 ORTHO05D007183 2.6e-223 779.2 743 56.4
Gohir.A05G355700 Gossypium hirsutum HOM05D005666 ORTHO05D007183 7.5e-223 777.7 700 60.0
arahy.Tifrunner.gnm1.ann1.XQUA9L Arachis hypogaea HOM05D005666 ORTHO05D007183 2.2e-222 776.2 701 57.1
VMungo0464G0315 Vigna mungo HOM05D005666 ORTHO05D007183 6.3e-222 774.6 714 56.4
PGR083G1531 Punica granatum HOM05D005666 ORTHO05D007183 8.3e-222 774.2 698 57.7
FAN09G4801 Fragaria x ananassa HOM05D005666 ORTHO05D007183 7.7e-220 767.7 743 55.6
Medtr8g094170 Medicago truncatula HOM05D005666 ORTHO05D007183 1.3e-219 766.9 700 56.9
FAN05G0542 Fragaria x ananassa HOM05D005666 ORTHO05D007183 3.3e-218 762.3 756 55.2
Thecc.04G017300 Theobroma cacao HOM05D005666 ORTHO05D007183 5.6e-218 761.5 719 57.4
FAN02G4175 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.2e-217 760.4 752 54.9
Rhsim08G0049000 Rhododendron simsii HOM05D005666 ORTHO05D007183 1.6e-217 760.0 695 59.3
Sc03g0007440 Simmondsia chinensis HOM05D005666 ORTHO05D007183 3.6e-217 758.8 697 58.4
Ca_04159_v3 Cicer arietinum L. HOM05D005666 ORTHO05D007183 8.0e-217 757.7 689 56.5
AUR62026681 Chenopodium quinoa HOM05D005666 ORTHO05D007183 2.6e-215 752.7 720 55.8
ECA246G2761 Erigeron canadensis HOM05D005666 ORTHO05D007183 7.5e-215 751.1 700 56.9
Cc07_g01670 Coffea canephora HOM05D005666 ORTHO05D007183 1.1e-213 747.3 706 56.4
Migut.K01395 Erythranthe guttata HOM05D005666 ORTHO05D007183 3.2e-213 745.7 688 57.4
Prupe.3G291700 Prunus persica HOM05D005666 ORTHO05D007183 3.2e-213 745.7 652 59.2
HanXRQChr15g0475291 Helianthus annuus HOM05D005666 ORTHO05D007183 9.2e-213 744.2 689 57.8
CAN.G1057.3 Capsicum annuum HOM05D005666 ORTHO05D007183 1.2e-212 743.8 709 55.4
Nn3g16730 Nelumbo nucifera HOM05D005666 ORTHO05D007183 5.9e-212 741.5 697 58.4
PGSC0003DMG400006959 Solanum tuberosum HOM05D005666 ORTHO05D007183 7.8e-212 741.1 705 56.0
SalBow7G2092 Salvia bowleyana HOM05D005666 ORTHO05D007183 8.6e-211 737.6 704 55.5
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 1.5e-210 736.9 681 56.2
Sopen02g016930 Solanum pennellii HOM05D005666 ORTHO05D007183 2.5e-210 736.1 721 54.8
DCAR_027499 Daucus carota HOM05D005666 ORTHO05D007183 4.3e-210 735.3 671 57.4
Nitab4.5_0008365g0020 Nicotiana tabacum HOM05D005666 ORTHO05D007183 9.5e-210 734.2 709 55.7
CSS0006540 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 2.1e-209 733.0 654 59.9
SGA_v2.0_scaffold47G17503 Striga asiatica HOM05D005666 ORTHO05D007183 4.0e-208 728.8 701 56.5
Ah.05g168070 Amaranthus hybridus HOM05D005666 ORTHO05D007183 4.1e-205 718.8 712 54.2
PSO017G6377 Papaver somniferum HOM05D005666 ORTHO05D007183 2.7e-204 716.1 700 55.3
HanXRQChr17g0548481 Helianthus annuus HOM05D005666 ORTHO05D007183 2.3e-203 713.0 680 55.6
Lsat_1_v5_gn_0_47721 Lactuca sativa HOM05D005666 ORTHO05D007183 3.0e-203 712.6 666 56.5
FvH4_6g51190 Fragaria vesca HOM05D005666 ORTHO05D007183 1.9e-202 709.9 684 55.1
Lju41A42G100 Lonicera japonica HOM05D005666 ORTHO05D007183 7.3e-202 708.0 611 59.1
Aqoxy3G01199 Aquilegia oxysepala HOM05D005666 ORTHO05D007183 1.2e-201 707.2 726 53.2
PSO478G0823 Papaver somniferum HOM05D005666 ORTHO05D007183 1.6e-201 706.8 702 54.7
Hund22837 Selenicereus undatus HOM05D005666 ORTHO05D007183 8.1e-201 704.5 715 53.7
Nitab4.5_0002529g0030 Nicotiana tabacum HOM05D005666 ORTHO05D007183 1.8e-200 703.4 692 55.8
Glyma.19G004600 Glycine max HOM05D005666 ORTHO05D007183 2.3e-200 703.0 643 56.0
Hma1.2p1_0999F.1_g246220 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 7.1e-197 691.4 594 61.8
Solyc02g067820.4 Solanum lycopersicum HOM05D005666 ORTHO05D007183 3.3e-194 682.6 700 53.9
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 3.1e-192 676.0 652 56.3
Peaxi162Scf00080g00117 Petunia axillaris HOM05D005666 ORTHO05D007183 4.4e-191 672.2 692 53.6
Psat1g054440 Pisum sativum HOM05D005666 ORTHO05D007183 7.6e-191 671.4 602 57.6
Oeu048621.1 Olea europaea HOM05D005666 ORTHO05D007183 2.1e-188 663.3 596 57.7
EL10Ac1g01578 Beta vulgaris HOM05D005666 ORTHO05D007183 1.7e-187 660.2 732 50.4
DCAR_011253 Daucus carota HOM05D005666 ORTHO05D007183 4.3e-186 655.6 770 49.2
CDE05G2460 Ceratophyllum demersum HOM05D005666 ORTHO05D007183 1.2e-185 654.1 700 51.3
MBI16_g31718_MAGBIO Magnolia biondii HOM05D005666 ORTHO05D007183 2.8e-185 652.9 709 52.9
FAN05G2905 Fragaria x ananassa HOM05D005666 ORTHO05D007183 7.6e-183 644.8 637 56.2
Zm00001eb156580 Zea mays HOM05D005666 ORTHO05D007183 5.3e-176 622.1 705 48.2
CSS0011984 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 9.3e-173 611.3 598 57.7
Eucgr.J02243 Eucalyptus grandis HOM05D005666 ORTHO05D007183 3.5e-172 609.4 514 60.3
unitig_747.g21863 Utricularia gibba HOM05D005666 ORTHO05D007183 3.5e-172 609.4 699 49.2
HPP92_013793 Vanilla planifolia HOM05D005666 ORTHO05D007183 3.0e-171 606.3 695 50.2
ATR0686G164 Amborella trichopoda HOM05D005666 ORTHO05D007183 7.1e-157 558.5 608 49.7
Actinidia16943 Actinidia chinensis HOM05D005666 ORTHO05D007183 3.1e-144 516.5 634 48.7
CSS0008870 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 5.9e-143 512.3 416 63.9
vmacro06910 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 1.1e-141 508.1 530 54.3
AUR62040590 Chenopodium quinoa HOM05D005666 ORTHO05D007183 2.8e-129 466.8 426 56.1
Mapoly0008s0195 Marchantia polymorpha HOM05D005666 ORTHO05D007183 5.7e-114 416.0 752 37.9
AagrBONN_evm.TU.Sc2ySwM_344.4982 Anthoceros agrestis HOM05D005666 ORTHO05D007183 6.1e-108 396.0 768 34.9
SMO134G0274 Selaginella moellendorffii HOM05D005666 ORTHO05D007183 2.8e-100 370.5 716 35.8
THA.LOC109116951 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 1.0e-99 368.6 290 67.2
Pp3c22_6140 Physcomitrium patens HOM05D005666 ORTHO05D007183 4.6e-87 326.6 468 40.2
ATR0762G005 Amborella trichopoda HOM05D005666 ORTHO05D007183 8.6e-78 295.8 328 47.6
SEGI_39396 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 7.3e-77 292.7 330 47.6
ATR0919G001 Amborella trichopoda HOM05D005666 ORTHO05D007183 1.8e-59 235.0 232 51.7
SHI16418 Sapria himalayana HOM05D005666 ORTHO05D007183 5.8e-58 229.9 284 48.2
A02p05250 Brassica napus HOM05D005666 ORTHO05D007183 7.1e-56 223.0 306 45.4
SHI16416 Sapria himalayana HOM05D005666 ORTHO05D007183 3.8e-49 200.7 262 45.0
Os01g0682200 Oryza sativa ssp. japonica HOM05D005666 ORTHO05D007183 2.1e-44 184.9 251 41.4
THA.LOC104820325 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 9.0e-43 179.5 156 62.2
CBR_g49194 Chara braunii HOM05D005666 ORTHO05D007183 1.3e-41 175.6 422 29.9
MCO10G117 Micromonas commoda HOM05D005666 ORTHO05D007183 9.0e-35 152.9 708 26.4
TPR.G20372 Trifolium pratense HOM05D005666 ORTHO05D007183 8.5e-33 146.4 156 51.3
Oeu030978.1 Olea europaea HOM05D005666 ORTHO05D007183 4.8e-28 130.6 124 57.3
BolC2t06938H Brassica oleracea HOM05D005666 ORTHO05D043081 3.3e-21 107.8 183 43.7
Oeu048620.1 Olea europaea HOM05D005666 ORTHO05D007183 2.4e-19 101.7 91 60.4
CiPaw.04G028500 Carya illinoinensis HOM05D005666 ORTHO05D007183 1.3e-17 95.9 62 79.0
FvH4_6g51172 Fragaria vesca HOM05D005666 ORTHO05D007183 7.7e-10 70.1 61 63.9
SEGI_03684 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 2.2e-09 68.6 90 45.6
Thecc.05G064500 Theobroma cacao HOM05D005666 ORTHO05D007183 8.8e-06 56.6 103 36.9


User provided reference genes

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