Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G18065 Arabidopsis thaliana HOM05D008365 ORTHO05D011149 2.3e-66 255.4 127 100.0
AL6G29250 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 9.9e-57 223.4 126 85.7
AL6G29230 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 4.6e-54 214.5 126 83.3
Carub.0004s1486 Capsella rubella HOM05D008365 ORTHO05D011149 4.5e-41 171.4 127 65.4
CARHR215270 Cardamine hirsuta HOM05D008365 ORTHO05D011149 2.4e-39 165.6 124 66.1
Carub.0008s0192 Capsella rubella HOM05D008365 ORTHO05D011149 1.1e-34 150.2 103 71.8
AT4G29770 Arabidopsis thaliana HOM05D008365 ORTHO05D011149 1.8e-34 149.4 122 63.9
AL7G22480 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 9.9e-33 143.7 122 60.7
AT4G29760 Arabidopsis thaliana HOM05D008365 ORTHO05D011149 1.2e-30 136.7 102 64.7
AL7G22500 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 2.1e-30 136.0 103 64.1
AL7G22490 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 1.8e-29 132.9 90 70.0
CARHR251110 Cardamine hirsuta HOM05D008365 ORTHO05D011149 1.9e-28 129.4 123 61.8
Sp7g27580 Schrenkiella parvula HOM05D008365 ORTHO05D011149 5.3e-26 121.3 115 56.5
BcaB03g12656 Brassica carinata HOM05D008365 ORTHO05D011149 3.3e-20 102.1 115 48.7
A08p19110 Brassica napus HOM05D008365 ORTHO05D011149 6.3e-19 97.8 117 50.4
BraA08t33873Z Brassica rapa HOM05D008365 ORTHO05D011149 1.1e-18 97.1 117 50.4
BcaB03g12655 Brassica carinata HOM05D008365 ORTHO05D011149 2.6e-17 92.4 115 43.5
BcaC09g51862 Brassica carinata HOM05D008365 ORTHO05D011149 7.6e-17 90.9 96 49.0
Thhalv10027444m.g Eutrema salsugineum HOM05D008365 ORTHO05D011149 7.6e-17 90.9 86 55.8
Thhalv10026005m.g Eutrema salsugineum HOM05D008365 ORTHO05D011149 2.2e-16 89.4 81 54.3
A07p02810 Brassica napus HOM05D008365 ORTHO05D011149 1.4e-15 86.7 109 40.4
BraA07t28079Z Brassica rapa HOM05D008365 ORTHO05D011149 1.4e-15 86.7 109 40.4
Carub.0004s1487 Capsella rubella HOM05D008365 ORTHO05D011149 4.2e-15 85.1 78 56.4
A01p07560 Brassica napus HOM05D008365 ORTHO05D011149 9.4e-15 84.0 96 46.9
Thhalv10011766m.g Eutrema salsugineum HOM05D008365 ORTHO05D011149 9.4e-15 84.0 93 52.7
AT5G18040 Arabidopsis thaliana HOM05D008365 ORTHO05D081110 2.3e-13 79.3 130 40.8
BcaC01g01143 Brassica carinata HOM05D008365 ORTHO05D011149 5.1e-13 78.2 117 42.7
BolC3t21165H Brassica oleracea HOM05D008365 ORTHO05D011149 5.1e-13 78.2 117 42.7
A08p19120 Brassica napus HOM05D008365 ORTHO05D011149 6.7e-13 77.8 115 40.9
C03p88590 Brassica napus HOM05D008365 ORTHO05D011149 1.5e-12 76.6 79 48.1
BraA08t33874Z Brassica rapa HOM05D008365 ORTHO05D011149 2.5e-12 75.9 79 49.4
A08p19130 Brassica napus HOM05D008365 ORTHO05D011149 3.3e-12 75.5 79 48.1
C03p88570 Brassica napus HOM05D008365 ORTHO05D011149 4.3e-12 75.1 100 50.0
C03p88560 Brassica napus HOM05D008365 ORTHO05D011149 7.4e-12 74.3 137 36.5
C01p08200 Brassica napus HOM05D008365 ORTHO05D011149 4.8e-11 71.6 81 50.6
BolC1t00807H Brassica oleracea HOM05D008365 ORTHO05D011149 1.1e-10 70.5 81 49.4
CARHR237670 Cardamine hirsuta HOM05D008365 ORTHO05D011149 1.8e-10 69.7 67 55.2
BraA01t00699Z Brassica rapa HOM05D008365 ORTHO05D011149 7.7e-09 64.3 81 46.9
AL1G54760 Arabidopsis lyrata HOM05D008365 ORTHO05D014862 1.7e-08 63.2 66 53.0
CARHR163030 Cardamine hirsuta HOM05D008365 ORTHO05D014862 2.2e-08 62.8 43 69.8
AT1G48180 Arabidopsis thaliana HOM05D008365 ORTHO05D014862 5.0e-08 61.6 44 68.2
Carub.0001s4052 Capsella rubella HOM05D008365 ORTHO05D014862 6.5e-08 61.2 101 42.6
AT1G51670 Arabidopsis thaliana HOM05D008365 ORTHO05D014862 1.1e-07 60.5 96 43.8
AL1G61110 Arabidopsis lyrata HOM05D008365 ORTHO05D014862 1.9e-07 59.7 48 62.5
AL1G59580 Arabidopsis lyrata HOM05D008365 ORTHO05D014862 1.2e-06 57.0 63 50.8
Carub.0001s4053 Capsella rubella HOM05D008365 ORTHO05D014862 1.2e-06 57.0 43 65.1
Carub.0001s4054 Capsella rubella HOM05D008365 ORTHO05D014862 4.7e-06 55.1 75 46.7
CARHR063690 Cardamine hirsuta HOM05D008365 ORTHO05D014862 6.1e-06 54.7 42 66.7


User provided reference genes

Program Settings