Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G17610 Arabidopsis thaliana HOM05D007033 ORTHO05D008770 8.6e-66 253.4 122 100.0
AL6G28700 Arabidopsis lyrata HOM05D007033 ORTHO05D008770 2.0e-59 232.3 122 93.4
Carub.0006s1585 Capsella rubella HOM05D007033 ORTHO05D008770 1.9e-57 225.7 122 87.7
CARHR195570 Cardamine hirsuta HOM05D007033 ORTHO05D008770 2.1e-56 222.2 121 88.4
Sp6g26610 Schrenkiella parvula HOM05D007033 ORTHO05D008770 2.8e-56 221.9 122 86.9
Thhalv10014961m.g Eutrema salsugineum HOM05D007033 ORTHO05D008770 3.1e-55 218.4 122 84.4
BcaC03g13530 Brassica carinata HOM05D007033 ORTHO05D008770 8.9e-55 216.9 121 85.1
BolC2t06829H Brassica oleracea HOM05D007033 ORTHO05D008770 8.9e-55 216.9 121 85.1
C02p09210 Brassica napus HOM05D007033 ORTHO05D008770 1.2e-54 216.5 121 84.3
A02p04360 Brassica napus HOM05D007033 ORTHO05D008770 2.0e-54 215.7 121 84.3
BraA02t05400Z Brassica rapa HOM05D007033 ORTHO05D008770 2.0e-54 215.7 121 84.3
BcaC04g18775 Brassica carinata HOM05D007033 ORTHO05D008770 3.2e-52 208.4 125 80.8
C09p59560 Brassica napus HOM05D007033 ORTHO05D008770 3.2e-52 208.4 125 80.8
BolC9t58794H Brassica oleracea HOM05D007033 ORTHO05D008770 3.2e-52 208.4 125 80.8
THA.LOC104827245 Tarenaya hassleriana HOM05D007033 ORTHO05D008770 2.8e-48 195.3 123 79.7
PGR042G3214 Punica granatum HOM05D007033 ORTHO05D008770 3.4e-46 188.3 119 74.8
FvH4_7g07210 Fragaria vesca HOM05D007033 ORTHO05D008770 5.4e-44 181.0 108 72.2
VMungo0331G1478 Vigna mungo HOM05D007033 ORTHO05D008770 5.4e-44 181.0 109 76.1
FAN03G2679 Fragaria x ananassa HOM05D007033 ORTHO05D008770 7.1e-44 180.6 108 72.2
RcHm_v2.0_Chr1g0337311 Rosa chinensis HOM05D007033 ORTHO05D008770 7.1e-44 180.6 108 72.2
FAN06G3925 Fragaria x ananassa HOM05D007033 ORTHO05D008770 1.6e-43 179.5 108 71.3
Phvul.010G038500 Phaseolus vulgaris HOM05D007033 ORTHO05D008770 2.7e-43 178.7 109 74.3
Gohir.A13G085300 Gossypium hirsutum HOM05D007033 ORTHO05D008770 6.0e-43 177.6 111 75.7
Thecc.05G231700 Theobroma cacao HOM05D007033 ORTHO05D008770 7.8e-43 177.2 113 73.5
Ciclev10033075m.g Citrus clementina HOM05D007033 ORTHO05D008770 1.3e-42 176.4 116 70.7
GSVIVG01011318001 Vitis vinifera HOM05D007033 ORTHO05D008770 1.3e-42 176.4 113 74.3
Nn3g19225 Nelumbo nucifera HOM05D007033 ORTHO05D008770 1.7e-42 176.0 124 67.7
MD07G1078200 Malus domestica HOM05D007033 ORTHO05D008770 2.3e-42 175.6 110 73.6
Manes.08G157600 Manihot esculenta HOM05D007033 ORTHO05D008770 2.3e-42 175.6 110 75.5
Prupe.2G100000 Prunus persica HOM05D007033 ORTHO05D008770 2.3e-42 175.6 109 71.6
Potri.013G073100 Populus trichocarpa HOM05D007033 ORTHO05D008770 3.9e-42 174.9 115 70.4
Eucgr.E01772 Eucalyptus grandis HOM05D007033 ORTHO05D008770 5.1e-42 174.5 107 73.8
Gohir.D13G100400 Gossypium hirsutum HOM05D007033 ORTHO05D008770 6.6e-42 174.1 120 70.0
Gorai.013G112100 Gossypium raimondii HOM05D007033 ORTHO05D008770 6.6e-42 174.1 120 70.0
MD02G1238400 Malus domestica HOM05D007033 ORTHO05D008770 8.6e-42 173.7 94 80.9
Aqoxy5G03237 Aquilegia oxysepala HOM05D007033 ORTHO05D008770 1.5e-41 172.9 114 66.7
Glyma.03G098200 Glycine max HOM05D007033 ORTHO05D008770 3.3e-41 171.8 115 67.0
CANSAT35G1406 Cannabis sativa HOM05D007033 ORTHO05D008770 4.3e-41 171.4 119 63.9
Dinv43975 Davidia involucrata HOM05D007033 ORTHO05D008770 4.3e-41 171.4 115 66.1
Haze_15805 Corylus avellana HOM05D007033 ORTHO05D008770 9.5e-41 170.2 114 67.5
Sc23g0004770 Simmondsia chinensis HOM05D007033 ORTHO05D008770 9.5e-41 170.2 104 75.0
TWI60G0127 Tripterygium wilfordii HOM05D007033 ORTHO05D008770 9.5e-41 170.2 114 68.4
Lj3g0004375 Lotus japonicus HOM05D007033 ORTHO05D008770 1.6e-40 169.5 125 65.6
arahy.Tifrunner.gnm1.ann1.GIK8C1 Arachis hypogaea HOM05D007033 ORTHO05D008770 2.1e-40 169.1 109 70.6
Glyma.07G123600 Glycine max HOM05D007033 ORTHO05D008770 2.1e-40 169.1 107 69.2
Hma1.2p1_0353F.1_g133340 Hydrangea macrophylla HOM05D007033 ORTHO05D008770 2.1e-40 169.1 96 76.0
CsaV3_3G010550 Cucumis sativus L. HOM05D007033 ORTHO05D008770 2.8e-40 168.7 109 69.7
arahy.Tifrunner.gnm1.ann1.14YBGE Arachis hypogaea HOM05D007033 ORTHO05D008770 3.6e-40 168.3 109 70.6
EL10Ac1g00673 Beta vulgaris HOM05D007033 ORTHO05D008770 3.6e-40 168.3 110 70.0
Sed0003013 Sechium edule HOM05D007033 ORTHO05D008770 4.7e-40 167.9 111 70.3
BraA10t44240Z Brassica rapa HOM05D007033 ORTHO05D008770 8.1e-40 167.2 107 75.7
MELO3C006276.2 Cucumis melo HOM05D007033 ORTHO05D008770 8.1e-40 167.2 109 68.8
TPR.G17361 Trifolium pratense HOM05D007033 ORTHO05D008770 8.1e-40 167.2 117 68.4
ClCG05G002970 Citrullus lanatus HOM05D007033 ORTHO05D008770 1.4e-39 166.4 109 67.9
Lsat_1_v5_gn_4_42281 Lactuca sativa HOM05D007033 ORTHO05D008770 8.9e-39 163.7 105 69.5
MBI16_g43713_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 8.9e-39 163.7 90 80.0
Actinidia21596 Actinidia chinensis HOM05D007033 ORTHO05D008770 1.2e-38 163.3 112 67.0
Rhsim12G0078100 Rhododendron simsii HOM05D007033 ORTHO05D008770 1.2e-38 163.3 94 74.5
PSO782G0028 Papaver somniferum HOM05D007033 ORTHO05D008770 1.5e-38 162.9 112 62.5
PSO063G1631 Papaver somniferum HOM05D007033 ORTHO05D008770 2.0e-38 162.5 112 62.5
HPP92_003404 Vanilla planifolia HOM05D007033 ORTHO05D008770 2.0e-38 162.5 113 68.1
Sabra13G0063200 Salix brachista HOM05D007033 ORTHO05D008770 2.6e-38 162.2 102 76.5
HPP92_003427 Vanilla planifolia HOM05D007033 ORTHO05D008770 2.6e-38 162.2 113 68.1
CAN.G700.33 Capsicum annuum HOM05D007033 ORTHO05D008770 3.4e-38 161.8 111 65.8
Cc02_g26390 Coffea canephora HOM05D007033 ORTHO05D008770 3.4e-38 161.8 113 66.4
ECA234G3633 Erigeron canadensis HOM05D007033 ORTHO05D008770 7.6e-38 160.6 112 64.3
Migut.B01441 Erythranthe guttata HOM05D007033 ORTHO05D008770 2.2e-37 159.1 112 63.4
Hund17162 Selenicereus undatus HOM05D007033 ORTHO05D008770 2.2e-37 159.1 114 64.9
CiPaw.02G048600 Carya illinoinensis HOM05D007033 ORTHO05D008770 4.9e-37 157.9 109 66.1
CDE12G0505 Ceratophyllum demersum HOM05D007033 ORTHO05D008770 6.4e-37 157.5 114 64.9
HanXRQChr03g0088201 Helianthus annuus HOM05D007033 ORTHO05D008770 6.4e-37 157.5 93 72.0
Lalb_Chr12g0210181 Lupinus albus HOM05D007033 ORTHO05D008770 6.4e-37 157.5 112 67.0
Peaxi162Scf00592g00448 Petunia axillaris HOM05D007033 ORTHO05D008770 6.4e-37 157.5 121 57.9
vmacro21112 Vaccinium macrocarpon HOM05D007033 ORTHO05D008770 8.3e-37 157.1 92 72.8
PGSC0003DMG400001787 Solanum tuberosum HOM05D007033 ORTHO05D008770 1.4e-36 156.4 118 62.7
Sopen01g032780 Solanum pennellii HOM05D007033 ORTHO05D008770 2.4e-36 155.6 113 62.8
Zm00001eb009070 Zea mays HOM05D007033 ORTHO05D008770 2.4e-36 155.6 109 66.1
COL.COLO4_08541 Corchorus olitorius HOM05D007033 ORTHO05D008770 3.2e-36 155.2 99 72.7
Solyc01g081200.3 Solanum lycopersicum HOM05D007033 ORTHO05D008770 3.2e-36 155.2 113 62.8
SGA_v2.0_scaffold98G29399 Striga asiatica HOM05D007033 ORTHO05D008770 1.2e-35 153.3 142 54.9
Sed0002871 Sechium edule HOM05D007033 ORTHO05D008770 2.7e-35 152.1 109 63.3
Psat4g215800 Pisum sativum HOM05D007033 ORTHO05D008770 4.6e-35 151.4 105 66.7
Cfa003682 Carpinus fangiana HOM05D007033 ORTHO05D008770 7.8e-35 150.6 130 58.5
QL04p052404 Quercus lobata HOM05D007033 ORTHO05D008770 3.0e-34 148.7 80 78.8
MBI16_g43476_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 9.6e-33 143.7 100 67.0
SalBow5G2417 Salvia bowleyana HOM05D007033 ORTHO05D008770 6.2e-32 141.0 107 62.6
Sc23g0004660 Simmondsia chinensis HOM05D007033 ORTHO05D008770 6.2e-32 141.0 106 64.2
ATR0829G185 Amborella trichopoda HOM05D007033 ORTHO05D008770 2.4e-31 139.0 81 74.1
AUR62014520 Chenopodium quinoa HOM05D007033 ORTHO05D008770 8.9e-31 137.1 96 69.8
Nitab4.5_0004594g0020 Nicotiana tabacum HOM05D007033 ORTHO05D008770 8.9e-31 137.1 97 66.0
Ah.05g177250 Amaranthus hybridus HOM05D007033 ORTHO05D008770 1.5e-30 136.3 103 62.1
unitig_8.g3853 Utricularia gibba HOM05D007033 ORTHO05D008770 2.0e-30 136.0 93 63.4
Nitab4.5_0004800g0080 Nicotiana tabacum HOM05D007033 ORTHO05D008770 3.4e-30 135.2 100 61.0
AUR62038014 Chenopodium quinoa HOM05D007033 ORTHO05D008770 7.6e-30 134.0 96 68.8
SEGI_14041 Sequoiadendron giganteum HOM05D007033 ORTHO05D008770 6.4e-29 131.0 96 63.5
HPP92_025932 Vanilla planifolia HOM05D007033 ORTHO05D008770 1.2e-27 126.7 106 57.5
A10p21800 Brassica napus HOM05D007033 ORTHO05D008770 6.2e-24 114.4 57 86.0
AagrBONN_evm.TU.Sc2ySwM_368.1536 Anthoceros agrestis HOM05D007033 ORTHO05D008770 2.0e-22 109.4 106 49.1
SMO351G0381 Selaginella moellendorffii HOM05D007033 ORTHO05D008770 3.4e-22 108.6 109 46.8
Mapoly0058s0110 Marchantia polymorpha HOM05D007033 ORTHO05D008770 1.4e-20 103.2 109 49.5
TAR629G3499 Trochodendron aralioides HOM05D007033 ORTHO05D008770 1.4e-20 103.2 53 81.1
Pp3c19_9960 Physcomitrium patens HOM05D007033 ORTHO05D008770 1.9e-20 102.8 115 44.3
Pp3c7_5640 Physcomitrium patens HOM05D007033 ORTHO05D008770 4.2e-20 101.7 114 43.9
Pp3c18_1710 Physcomitrium patens HOM05D007033 ORTHO05D008770 5.6e-17 91.3 107 44.9
Atru.chr2.1689 Acer truncatum HOM05D007033 ORTHO05D008770 5.8e-14 81.3 43 79.1
Sopen05g015510 Solanum pennellii HOM05D007033 ORTHO05D008770 8.4e-13 77.4 48 64.6
Aa31LG11G12040 Aethionema arabicum HOM05D007033 ORTHO05D008770 5.4e-12 74.7 51 74.5
MCO10G230 Micromonas commoda HOM05D007033 ORTHO05D008770 6.2e-08 61.2 100 33.0
PRCOL_00006026 Prasinoderma coloniale HOM05D007033 ORTHO05D008770 1.8e-07 59.7 44 50.0
Peaxi162Scf00117g01735 Petunia axillaris HOM05D007033 ORTHO05D008770 1.2e-06 57.0 57 52.6
CBR_g44313 Chara braunii HOM05D007033 ORTHO05D008770 2.6e-06 55.8 63 39.7
CBR_g49607 Chara braunii HOM05D007033 ORTHO05D008770 4.5e-06 55.1 63 41.3


User provided reference genes

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