Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G17460 Arabidopsis thaliana HOM05D002536 ORTHO05D008091 8.9e-120 433.7 235 100.0
Sp6g26760 Schrenkiella parvula HOM05D002536 ORTHO05D008091 2.3e-112 409.1 235 94.0
Thhalv10014009m.g Eutrema salsugineum HOM05D002536 ORTHO05D008091 1.5e-111 406.4 235 93.6
Aa31LG11G12180 Aethionema arabicum HOM05D002536 ORTHO05D008091 1.2e-108 396.7 235 88.9
AL6G28530 Arabidopsis lyrata HOM05D002536 ORTHO05D008091 6.6e-107 391.0 217 97.7
A02p04220 Brassica napus HOM05D002536 ORTHO05D008091 1.8e-104 382.9 239 89.5
BraA02t05385Z Brassica rapa HOM05D002536 ORTHO05D008091 1.8e-104 382.9 239 89.5
BolC2t06821H Brassica oleracea HOM05D002536 ORTHO05D008091 2.4e-104 382.5 235 90.2
Carub.0006s1568 Capsella rubella HOM05D002536 ORTHO05D008091 2.4e-104 382.5 216 95.4
C02p09100 Brassica napus HOM05D002536 ORTHO05D008091 3.4e-103 378.6 231 90.9
CARHR195750 Cardamine hirsuta HOM05D002536 ORTHO05D008091 7.6e-103 377.5 216 94.9
Sabra04G0061700 Salix brachista HOM05D002536 ORTHO05D008091 3.3e-98 362.1 235 78.3
Manes.01G115200 Manihot esculenta HOM05D002536 ORTHO05D008091 9.6e-98 360.5 235 78.3
Potri.004G091600 Populus trichocarpa HOM05D002536 ORTHO05D008091 1.4e-96 356.7 235 78.3
COL.COLO4_16592 Corchorus olitorius HOM05D002536 ORTHO05D008091 2.4e-96 355.9 238 81.9
Ciclev10012168m.g Citrus clementina HOM05D002536 ORTHO05D008091 2.6e-95 352.4 236 81.4
TWI53G1346 Tripterygium wilfordii HOM05D002536 ORTHO05D008091 5.8e-95 351.3 235 76.6
DCAR_008922 Daucus carota HOM05D000103 ORTHO05D008091 7.6e-95 350.9 235 77.9
Atru.chr1.1780 Acer truncatum HOM05D002536 ORTHO05D008091 1.7e-94 349.7 235 77.0
Atru.chr1.1783 Acer truncatum HOM05D002536 ORTHO05D008091 1.7e-94 349.7 235 77.0
Rhsim10G0078900 Rhododendron simsii HOM05D002536 ORTHO05D008091 1.6e-92 343.2 235 74.9
Actinidia15922 Actinidia chinensis HOM05D002536 ORTHO05D008091 2.1e-92 342.8 235 78.7
Cpa.g.sc116.19 Carica papaya HOM05D002536 ORTHO05D008091 3.5e-92 342.0 235 80.4
Eucgr.F02816 Eucalyptus grandis HOM05D002536 ORTHO05D008091 6.0e-92 341.3 235 75.3
AUR62023248 Chenopodium quinoa HOM05D002536 ORTHO05D008091 1.3e-91 340.1 235 74.5
Sed0014940 Sechium edule HOM05D002536 ORTHO05D008091 3.0e-91 339.0 234 76.5
EL10Ac2g04494 Beta vulgaris HOM05D002536 ORTHO05D008091 5.1e-91 338.2 235 74.0
CsaV3_3G017670 Cucumis sativus L. HOM05D002536 ORTHO05D008091 6.6e-91 337.8 234 75.6
arahy.Tifrunner.gnm1.ann1.SZ684F Arachis hypogaea HOM05D002536 ORTHO05D008091 1.9e-90 336.3 235 73.6
Gohir.D04G186100 Gossypium hirsutum HOM05D002536 ORTHO05D008091 1.9e-90 336.3 238 78.6
Gorai.012G182500 Gossypium raimondii HOM05D002536 ORTHO05D008091 1.9e-90 336.3 238 78.6
Ah.10g037920 Amaranthus hybridus HOM05D002536 ORTHO05D008091 2.5e-90 335.9 235 72.8
CANSAT78G0797 Cannabis sativa HOM05D002536 ORTHO05D008091 3.3e-90 335.5 235 74.9
MELO3C020303.2 Cucumis melo HOM05D002536 ORTHO05D008091 3.3e-90 335.5 234 74.8
Medtr5g086010 Medicago truncatula HOM05D002536 ORTHO05D008091 5.6e-90 334.7 235 72.3
Gohir.A04G142800 Gossypium hirsutum HOM05D002536 ORTHO05D008091 9.6e-90 334.0 238 78.2
LjContig00564g0008816 Lotus japonicus HOM05D002536 ORTHO05D008091 9.6e-90 334.0 235 73.2
Medtr5g087440 Medicago truncatula HOM05D002536 ORTHO05D008091 2.1e-89 332.8 235 71.9
Ca_06135_v3 Cicer arietinum L. HOM05D002536 ORTHO05D008091 3.6e-89 332.0 235 72.3
TPR.G11790 Trifolium pratense HOM05D002536 ORTHO05D008091 3.6e-89 332.0 235 72.8
MSTRG.23612 Avicennia marina HOM05D002536 ORTHO05D008091 6.2e-89 331.3 234 71.4
Oeu047422.1 Olea europaea HOM05D002536 ORTHO05D008091 6.2e-89 331.3 234 76.9
Lj2P435T31 Lonicera japonica HOM05D002536 ORTHO05D008091 8.1e-89 330.9 234 73.5
arahy.Tifrunner.gnm1.ann1.NZLK2N Arachis hypogaea HOM05D002536 ORTHO05D008091 1.1e-88 330.5 235 71.9
Sc10g0000870 Simmondsia chinensis HOM05D002536 ORTHO05D008091 1.1e-88 330.5 235 76.6
Lalb_Chr03g0036071 Lupinus albus HOM05D002536 ORTHO05D008091 1.4e-88 330.1 235 72.3
ClCG05G010840 Citrullus lanatus HOM05D002536 ORTHO05D008091 1.8e-88 329.7 234 74.4
Psat2g023480 Pisum sativum HOM05D002536 ORTHO05D008091 1.8e-88 329.7 235 71.1
Cc07_g08230 Coffea canephora HOM05D002536 ORTHO05D008091 5.3e-88 328.2 234 70.9
Duzib248G1146 Durio zibethinus HOM05D002536 ORTHO05D008091 9.0e-88 327.4 238 76.9
Thecc.02G292900 Theobroma cacao HOM05D002536 ORTHO05D008091 9.9e-87 323.9 238 76.5
HanXRQChr11g0325231 Helianthus annuus HOM05D002536 ORTHO05D008091 1.7e-86 323.2 234 71.8
Aqoxy3G00142 Aquilegia oxysepala HOM05D002536 ORTHO05D008091 2.2e-86 322.8 235 70.6
Migut.H00262 Erythranthe guttata HOM05D002536 ORTHO05D008091 4.9e-86 321.6 234 70.1
PGR004G1229 Punica granatum HOM05D002536 ORTHO05D008091 1.1e-85 320.5 235 72.3
ECA232G4028 Erigeron canadensis HOM05D002536 ORTHO05D008091 1.4e-85 320.1 235 71.1
BcaC03g13522 Brassica carinata HOM05D002536 ORTHO05D008091 1.9e-85 319.7 191 88.0
SalBow3G4287 Salvia bowleyana HOM05D002536 ORTHO05D008091 2.4e-85 319.3 234 69.2
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 3.2e-85 318.9 235 71.1
TAR622G0880 Trochodendron aralioides HOM05D002536 ORTHO05D008091 4.2e-85 318.5 236 71.6
Cfa007856 Carpinus fangiana HOM05D002536 ORTHO05D008091 7.1e-85 317.8 235 70.2
Hund13690 Selenicereus undatus HOM05D002536 ORTHO05D008091 9.3e-85 317.4 235 69.8
Sopen02g035940 Solanum pennellii HOM05D002536 ORTHO05D008091 1.6e-84 316.6 236 72.5
CiPaw.04G045700 Carya illinoinensis HOM05D002536 ORTHO05D008091 2.1e-84 316.2 235 70.6
Solyc02g091320.4 Solanum lycopersicum HOM05D002536 ORTHO05D008091 2.1e-84 316.2 234 72.2
QL05p059601 Quercus lobata HOM05D002536 ORTHO05D008091 2.7e-84 315.8 234 69.7
arahy.Tifrunner.gnm1.ann1.YLI9AK Arachis hypogaea HOM05D002536 ORTHO05D008091 3.5e-84 315.5 208 75.5
MD09G1260700 Malus domestica HOM05D002536 ORTHO05D008091 7.9e-84 314.3 235 70.6
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 1.0e-83 313.9 235 74.9
QL05p058873 Quercus lobata HOM05D002536 ORTHO05D008091 2.3e-83 312.8 234 69.2
QL05p059839 Quercus lobata HOM05D002536 ORTHO05D008091 2.3e-83 312.8 234 69.7
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 5.1e-83 311.6 235 70.2
arahy.Tifrunner.gnm1.ann1.CBV847 Arachis hypogaea HOM05D002536 ORTHO05D008091 8.7e-83 310.8 208 74.5
Phvul.004G133300 Phaseolus vulgaris HOM05D002536 ORTHO05D008091 8.7e-83 310.8 235 68.9
GSVIVG01030879001 Vitis vinifera HOM05D002536 ORTHO05D008091 1.1e-82 310.5 235 69.4
Prupe.3G152500 Prunus persica HOM05D002536 ORTHO05D008091 1.9e-82 309.7 235 69.4
Hma1.2p1_0283F.1_g113560 Hydrangea macrophylla HOM05D002536 ORTHO05D008091 2.5e-82 309.3 234 73.5
Lsat_1_v5_gn_4_154760 Lactuca sativa HOM05D002536 ORTHO05D008091 4.3e-82 308.5 236 70.8
VMungo1309G0890 Vigna mungo HOM05D002536 ORTHO05D008091 4.3e-82 308.5 235 68.5
GSVIVG01030878001 Vitis vinifera HOM05D002536 ORTHO05D008091 7.4e-82 307.8 235 68.9
Nitab4.5_0002248g0020 Nicotiana tabacum HOM05D002536 ORTHO05D008091 9.6e-82 307.4 237 70.5
Nitab4.5_0002456g0160 Nicotiana tabacum HOM05D002536 ORTHO05D008091 1.3e-81 307.0 237 70.5
CAN.G625.80 Capsicum annuum HOM05D002536 ORTHO05D008091 1.6e-81 306.6 236 70.8
FAN23G2237 Fragaria x ananassa HOM05D002536 ORTHO05D008091 4.8e-81 305.1 234 68.4
RcHm_v2.0_Chr3g0492091 Rosa chinensis HOM05D002536 ORTHO05D008091 4.8e-81 305.1 235 73.2
Dinv19004 Davidia involucrata HOM05D002536 ORTHO05D008091 6.2e-81 304.7 234 72.6
PGSC0003DMG400030642 Solanum tuberosum HOM05D002536 ORTHO05D008091 4.0e-80 302.0 236 70.3
Peaxi162Scf00803g00531 Petunia axillaris HOM05D002536 ORTHO05D008091 5.3e-80 301.6 235 69.8
FvH4_1g30050 Fragaria vesca HOM05D002536 ORTHO05D008091 1.2e-79 300.4 234 71.4
FAN19G1396 Fragaria x ananassa HOM05D002536 ORTHO05D008091 1.2e-79 300.4 234 71.4
Nn3g18195 Nelumbo nucifera HOM05D002536 ORTHO05D008091 5.8e-79 298.1 235 68.1
Phvul.008G162400 Phaseolus vulgaris HOM05D002536 ORTHO05D008091 1.3e-78 297.0 235 66.4
FAN26G2179 Fragaria x ananassa HOM05D002536 ORTHO05D008091 8.4e-78 294.3 234 70.5
SHI17045 Sapria himalayana HOM05D002536 ORTHO05D008091 8.7e-75 284.3 235 68.5
PSO478G1642 Papaver somniferum HOM05D002536 ORTHO05D008091 7.4e-74 281.2 236 66.5
Os01g0125700 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D008091 9.6e-74 280.8 236 66.9
PSO782G0049 Papaver somniferum HOM05D002536 ORTHO05D008091 1.3e-73 280.4 238 66.0
SGA_v2.0_scaffold6G03262 Striga asiatica HOM05D002536 ORTHO05D008091 1.2e-71 273.9 240 57.9
CDE07G0699 Ceratophyllum demersum HOM05D002536 ORTHO05D008091 7.6e-71 271.2 235 61.3
ATR0041G006 Amborella trichopoda HOM05D002536 ORTHO05D008091 1.3e-70 270.4 228 61.8
QL05p059463 Quercus lobata HOM05D002536 ORTHO05D008091 2.2e-70 269.6 234 61.5
AUR62023202 Chenopodium quinoa HOM05D002536 ORTHO05D008091 3.8e-70 268.9 180 75.6
SGA_v2.0_scaffold6G03266 Striga asiatica HOM05D002536 ORTHO05D008091 6.1e-68 261.5 240 57.1
SGA_v2.0_scaffold6G03263 Striga asiatica HOM05D002536 ORTHO05D008091 1.8e-67 260.0 238 56.7
Zm00001eb334950 Zea mays HOM05D002536 ORTHO05D008091 3.7e-65 252.3 170 73.5
MBI16_g46274_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D008091 7.7e-63 244.6 172 71.5
MD09G1260800 Malus domestica HOM05D002536 ORTHO05D008091 3.6e-60 235.7 180 70.6
FAN28G0948 Fragaria x ananassa HOM05D002536 ORTHO05D008091 6.1e-60 235.0 185 67.0
unitig_899.g15351 Utricularia gibba HOM05D002536 ORTHO05D008091 1.0e-54 217.6 178 61.8
Glyma.14G164000 Glycine max HOM05D002536 ORTHO05D008091 1.7e-54 216.9 234 54.7
SGA_v2.0_scaffold6G03268 Striga asiatica HOM05D002536 ORTHO05D008091 6.3e-49 198.4 195 53.3
SEGI_34238 Sequoiadendron giganteum HOM05D002536 ORTHO05D008091 7.0e-48 194.9 246 45.1
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 5.2e-43 178.7 134 70.1
Glyma.13G079200 Glycine max HOM05D002536 ORTHO05D008091 2.7e-39 166.4 146 63.7
A10p21940 Brassica napus HOM05D002536 ORTHO05D008091 3.2e-29 132.9 81 93.8
FAN28G0812 Fragaria x ananassa HOM05D002536 ORTHO05D008091 5.7e-26 122.1 234 41.5
MD09G1260900 Malus domestica HOM05D002536 ORTHO05D008091 7.5e-26 121.7 150 51.3
BcaC04g18790 Brassica carinata HOM05D002536 ORTHO05D008091 4.1e-24 115.9 95 69.5
BolC9t58807H Brassica oleracea HOM05D002536 ORTHO05D008091 4.5e-23 112.5 96 66.7
C09p59690 Brassica napus HOM05D002536 ORTHO05D008091 7.7e-23 111.7 95 68.4
HPP92_000766 Vanilla planifolia HOM05D002536 ORTHO05D008091 6.2e-12 75.5 83 51.8
BraA10t44252Z Brassica rapa HOM05D002536 ORTHO05D008091 1.4e-11 74.3 66 62.1
A10p21930 Brassica napus HOM05D002536 ORTHO05D008091 5.2e-11 72.4 66 62.1


User provided reference genes

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