Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G17370 Arabidopsis thaliana HOM05D005725 ORTHO05D007531 9.1e-309 1062.8 545 100.0
AL6G28440 Arabidopsis lyrata HOM05D005725 ORTHO05D007531 4.4e-255 884.4 528 88.1
Carub.0006s1558 Capsella rubella HOM05D005725 ORTHO05D007531 4.3e-234 814.7 526 81.6
Thhalv10015915m.g Eutrema salsugineum HOM05D005725 ORTHO05D007531 2.5e-210 735.7 531 71.6
BolC2t06810H Brassica oleracea HOM05D005725 ORTHO05D007531 1.1e-200 703.7 559 70.8
A02p04160 Brassica napus HOM05D005725 ORTHO05D007531 6.9e-200 701.0 544 71.5
CARHR195840 Cardamine hirsuta HOM05D005725 ORTHO05D007531 6.9e-200 701.0 536 69.6
Sp6g26850 Schrenkiella parvula HOM05D005725 ORTHO05D007531 2.5e-197 692.6 535 69.0
BcaC03g18554 Brassica carinata HOM05D005725 ORTHO05D007531 4.7e-196 688.3 540 70.4
C02p09010 Brassica napus HOM05D005725 ORTHO05D007531 2.3e-195 686.0 545 70.6
BraA02t05379Z Brassica rapa HOM05D005725 ORTHO05D007531 2.0e-194 682.9 544 70.6
BcaB05g23263 Brassica carinata HOM05D005725 ORTHO05D007531 1.1e-189 667.2 563 67.3
Aa31LG11G12260 Aethionema arabicum HOM05D005725 ORTHO05D007531 9.2e-160 567.8 492 60.6
Dinv17876 Davidia involucrata HOM05D005725 ORTHO05D007531 2.1e-124 450.3 540 47.4
RcHm_v2.0_Chr5g0021701 Rosa chinensis HOM05D005725 ORTHO05D007531 4.7e-124 449.1 532 46.2
FvH4_3g13240 Fragaria vesca HOM05D005725 ORTHO05D007531 1.4e-123 447.6 536 45.9
Manes.03G071900 Manihot esculenta HOM05D005725 ORTHO05D007531 4.9e-121 439.1 534 45.9
Nn7g38404 Nelumbo nucifera HOM05D005725 ORTHO05D007531 7.1e-120 435.3 487 48.3
CANSAT54G1139 Cannabis sativa HOM05D005725 ORTHO05D007531 1.9e-117 427.2 533 45.2
Potri.001G075300 Populus trichocarpa HOM05D005725 ORTHO05D007531 5.6e-117 425.6 475 48.6
GSVIVG01010083001 Vitis vinifera HOM05D005725 ORTHO05D007531 1.1e-115 421.4 538 43.9
Prupe.4G119800 Prunus persica HOM05D005725 ORTHO05D007531 1.4e-115 421.0 531 45.6
FAN21G2681 Fragaria x ananassa HOM05D005725 ORTHO05D007531 2.4e-115 420.2 478 48.3
CiPaw.10G107600 Carya illinoinensis HOM05D005725 ORTHO05D007531 6.9e-115 418.7 553 44.3
FAN11G2553 Fragaria x ananassa HOM05D005725 ORTHO05D007531 6.9e-115 418.7 520 45.2
TWI38G1126 Tripterygium wilfordii HOM05D005725 ORTHO05D007531 3.8e-113 412.9 533 43.5
Aqoxy1G01377 Aquilegia oxysepala HOM05D005725 ORTHO05D007531 1.8e-110 404.1 533 43.0
Thecc.02G002000 Theobroma cacao HOM05D005725 ORTHO05D007531 1.8e-110 404.1 474 47.3
Gorai.007G055200 Gossypium raimondii HOM05D005725 ORTHO05D007531 3.0e-110 403.3 481 47.2
MD05G1243800 Malus domestica HOM05D005725 ORTHO05D007531 6.7e-110 402.1 535 43.2
FAN16G0048 Fragaria x ananassa HOM05D005725 ORTHO05D007531 3.3e-109 399.8 471 46.7
Gohir.A11G047200 Gossypium hirsutum HOM05D005725 ORTHO05D007531 5.6e-109 399.1 481 47.2
Gohir.D11G050800 Gossypium hirsutum HOM05D005725 ORTHO05D007531 2.8e-108 396.7 481 46.8
Glyma.15G155900 Glycine max HOM05D005725 ORTHO05D007531 3.7e-108 396.4 532 44.5
Lalb_Chr18g0051971 Lupinus albus HOM05D005725 ORTHO05D007531 4.8e-108 396.0 478 46.4
Cfa001153 Carpinus fangiana HOM05D005725 ORTHO05D007531 3.4e-106 389.8 480 46.5
COL.COLO4_25036 Corchorus olitorius HOM05D005725 ORTHO05D007531 4.5e-106 389.4 472 47.0
Glyma.09G048600 Glycine max HOM05D005725 ORTHO05D007531 2.9e-105 386.7 532 44.0
Medtr2g437810 Medicago truncatula HOM05D005725 ORTHO05D007531 4.6e-103 379.4 534 43.3
Lj6g0004794 Lotus japonicus HOM05D005725 ORTHO05D007531 1.8e-102 377.5 540 43.0
Duzib132G0485 Durio zibethinus HOM05D005725 ORTHO05D007531 5.1e-102 375.9 534 40.8
Phvul.009G244300 Phaseolus vulgaris HOM05D005725 ORTHO05D007531 6.7e-102 375.6 530 41.7
TPR.G30931 Trifolium pratense HOM05D005725 ORTHO05D007531 6.7e-102 375.6 530 42.8
Atru.chr10.248 Acer truncatum HOM05D005725 ORTHO05D007531 9.6e-101 371.7 477 45.5
ECA232G4493 Erigeron canadensis HOM05D005725 ORTHO05D007531 4.8e-100 369.4 490 44.1
arahy.Tifrunner.gnm1.ann1.2M6VYA Arachis hypogaea HOM05D005725 ORTHO05D007531 1.8e-99 367.5 488 48.0
MELO3C007000.2 Cucumis melo HOM05D005725 ORTHO05D007531 3.1e-99 366.7 472 41.5
Eucgr.D00006 Eucalyptus grandis HOM05D005725 ORTHO05D007531 4.0e-99 366.3 474 46.2
VMungo1309G0521 Vigna mungo HOM05D005725 ORTHO05D007531 9.0e-99 365.2 533 42.2
DCAR_001262 Daucus carota HOM05D005725 ORTHO05D007531 2.2e-97 360.5 543 42.5
Sabra01G0053700 Salix brachista HOM05D005725 ORTHO05D007531 2.2e-97 360.5 607 38.6
FAN25G0714 Fragaria x ananassa HOM05D005725 ORTHO05D007531 8.4e-97 358.6 467 44.3
HanXRQChr09g0257851 Helianthus annuus HOM05D005725 ORTHO05D007531 7.9e-95 352.1 544 40.1
Sopen01g016500 Solanum pennellii HOM05D005725 ORTHO05D007531 5.1e-94 349.4 476 42.0
Cc09_g04730 Coffea canephora HOM05D005725 ORTHO05D007531 5.7e-93 345.9 479 40.9
Psat1g151080 Pisum sativum HOM05D005725 ORTHO05D007531 4.8e-92 342.8 475 42.1
Solyc01g021640.3 Solanum lycopersicum HOM05D005725 ORTHO05D007531 5.3e-91 339.3 476 41.2
AUR62003571 Chenopodium quinoa HOM05D005725 ORTHO05D007531 2.0e-90 337.4 473 40.8
Ca_02400_v3 Cicer arietinum L. HOM05D005725 ORTHO05D007531 1.7e-89 334.3 527 40.0
Ah.03g147910 Amaranthus hybridus HOM05D005725 ORTHO05D007531 1.1e-88 331.6 532 38.0
arahy.Tifrunner.gnm1.ann1.GBFD5K Arachis hypogaea HOM05D005725 ORTHO05D007531 2.1e-87 327.4 448 45.1
PGR004G2791 Punica granatum HOM05D005725 ORTHO05D007531 1.4e-86 324.7 482 41.7
ATR0794G001 Amborella trichopoda HOM05D005725 ORTHO05D007531 2.3e-86 323.9 484 41.3
PSO541G5061 Papaver somniferum HOM05D005725 ORTHO05D007531 6.7e-86 322.4 457 43.1
Migut.M02028 Erythranthe guttata HOM05D005725 ORTHO05D007531 2.2e-84 317.4 528 36.7
ClCG01G025890 Citrullus lanatus HOM05D005725 ORTHO05D007531 2.4e-83 313.9 458 40.0
Peaxi162Scf00378g00520 Petunia axillaris HOM05D005725 ORTHO05D007531 3.1e-83 313.5 530 38.9
MSTRG.16376 Avicennia marina HOM05D005725 ORTHO05D007531 2.6e-82 310.5 477 39.0
TAR626G0027 Trochodendron aralioides HOM05D005725 ORTHO05D007531 3.4e-82 310.1 371 46.6
Hund26771 Selenicereus undatus HOM05D005725 ORTHO05D007531 7.7e-82 308.9 480 39.0
arahy.Tifrunner.gnm1.ann1.G9C5AI Arachis hypogaea HOM05D005725 ORTHO05D007531 3.2e-80 303.5 448 43.8
SalBow8G4963 Salvia bowleyana HOM05D005725 ORTHO05D007531 7.2e-80 302.4 470 39.6
Zm00001eb298410 Zea mays HOM05D005725 ORTHO05D007531 3.6e-79 300.1 481 38.0
CsaV3_6G053120 Cucumis sativus L. HOM05D005725 ORTHO05D007531 7.9e-79 298.9 378 41.8
HPP92_000831 Vanilla planifolia HOM05D005725 ORTHO05D007531 6.5e-73 279.3 547 33.6
Os07g0108000 Oryza sativa ssp. japonica HOM05D005725 ORTHO05D007531 1.1e-72 278.5 538 35.5
vmacro03566 Vaccinium macrocarpon HOM05D005725 ORTHO05D007531 2.5e-72 277.3 656 32.8
AUR62017886 Chenopodium quinoa HOM05D005725 ORTHO05D007531 1.0e-70 271.9 474 36.5
QL11p011022 Quercus lobata HOM05D005725 ORTHO05D007531 3.0e-70 270.4 902 26.8
CSS0030006 Camellia sinensis var. sinensis HOM05D005725 ORTHO05D007531 5.2e-70 269.6 478 37.7
Ciclev10015389m.g Citrus clementina HOM05D005725 ORTHO05D007531 3.7e-68 263.5 403 41.2
Lsat_1_v5_gn_8_107401 Lactuca sativa HOM05D005725 ORTHO05D007531 3.7e-68 263.5 398 44.2
Sed0022851 Sechium edule HOM05D005725 ORTHO05D007531 1.6e-66 258.1 406 37.9
Nitab4.5_0001484g0010 Nicotiana tabacum HOM05D005725 ORTHO05D007531 8.0e-63 245.7 369 38.8
DCAR_004356 Daucus carota HOM05D005725 ORTHO05D007531 3.0e-62 243.8 429 35.9
Nitab4.5_0000253g0020 Nicotiana tabacum HOM05D005725 ORTHO05D007531 2.2e-60 237.7 365 37.5
Pp3c6_29180 Physcomitrium patens HOM05D005725 ORTHO05D007531 1.8e-59 234.6 508 31.1
Haze_05198 Corylus avellana HOM05D005725 ORTHO05D007531 7.7e-58 229.2 290 44.8
A03p08350 Brassica napus HOM05D005725 ORTHO05D007531 1.1e-56 225.3 269 53.5
SHI12770 Sapria himalayana HOM05D005725 ORTHO05D000023 2.1e-55 221.1 318 41.2
Duzib052G0524 Durio zibethinus HOM05D005725 ORTHO05D007531 6.3e-44 183.0 306 38.9
Atru.chr2.2825 Acer truncatum HOM05D005725 ORTHO05D007531 8.3e-44 182.6 341 37.0
Mapoly0033s0026 Marchantia polymorpha HOM05D005725 ORTHO05D007531 5.4e-43 179.9 515 27.6
Sc05g0005240 Simmondsia chinensis HOM05D005725 ORTHO05D007531 3.5e-42 177.2 317 37.2
RcHm_v2.0_Chr5g0021601 Rosa chinensis HOM05D005725 ORTHO05D007531 2.9e-41 174.1 279 38.4
DCAR_004355 Daucus carota HOM05D005725 ORTHO05D007531 8.6e-41 172.6 416 31.7
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 1.5e-40 171.8 215 44.2
Potri.003G155900 Populus trichocarpa HOM05D005725 ORTHO05D007531 2.0e-37 161.4 144 55.6
BcaC05g29074 Brassica carinata HOM05D005725 ORTHO05D007531 4.6e-34 150.2 147 64.6
RcHm_v2.0_Chr5g0021611 Rosa chinensis HOM05D005725 ORTHO05D007531 3.3e-32 144.1 162 46.3
BolC5t33962H Brassica oleracea HOM05D005725 ORTHO05D007531 6.2e-31 139.8 140 64.3
ECA232G1808 Erigeron canadensis HOM05D005725 ORTHO05D007531 8.0e-31 139.4 138 50.7
CDE06G0984 Ceratophyllum demersum HOM05D005725 ORTHO05D007531 6.8e-30 136.3 279 35.5
Haze_05199 Corylus avellana HOM05D005725 ORTHO05D007531 2.6e-29 134.4 264 38.3
AagrBONN_evm.TU.Sc2ySwM_368.2823 Anthoceros agrestis HOM05D005725 ORTHO05D007531 9.8e-29 132.5 496 25.0
C09p34670 Brassica napus HOM05D005725 ORTHO05D007531 6.4e-28 129.8 142 50.7
BolC9t56313H Brassica oleracea HOM05D005725 ORTHO05D007531 6.4e-28 129.8 142 50.7
EL10Ac6g15292 Beta vulgaris HOM05D005725 ORTHO05D007531 1.2e-26 125.6 99 57.6
BcaC04g22388 Brassica carinata HOM05D005725 ORTHO05D007531 4.6e-26 123.6 115 59.1
C09p19870 Brassica napus HOM05D005725 ORTHO05D007531 4.6e-26 123.6 115 59.1
BolC9t54892H Brassica oleracea HOM05D005725 ORTHO05D007531 4.6e-26 123.6 115 59.1
TAR626G0843 Trochodendron aralioides HOM05D005725 ORTHO05D007531 6.6e-25 119.8 133 46.6
Ciclev10017729m.g Citrus clementina HOM05D005725 ORTHO05D007531 5.6e-24 116.7 79 64.6
SEGI_40606 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 1.2e-23 115.5 136 44.1
SMO230G0054 Selaginella moellendorffii HOM05D005725 ORTHO05D007531 2.1e-23 114.8 254 29.5
CBR_g22873 Chara braunii HOM05D005725 ORTHO05D007531 1.4e-22 112.1 266 30.1
Oeu005615.1 Olea europaea HOM05D000039 ORTHO05D005263 4.4e-21 107.1 101 49.5
C05p52870 Brassica napus HOM05D005725 ORTHO05D007531 1.1e-19 102.4 137 43.8
SGA_v2.0_scaffold423G51459 Striga asiatica HOM05D005725 ORTHO05D007531 1.4e-19 102.1 145 40.0
unitig_746.g26585 Utricularia gibba HOM05D005725 ORTHO05D007531 1.8e-14 85.1 143 35.0
BcaB01g04934 Brassica carinata HOM05D005725 ORTHO05D093362 2.1e-10 71.6 63 66.7
Dinv31193 Davidia involucrata HOM05D005725 ORTHO05D020553 3.3e-08 64.3 113 37.2
SHI12772 Sapria himalayana HOM05D005725 ORTHO05D007531 4.8e-07 60.5 78 34.6
BraA09t40805Z Brassica rapa HOM05D005725 ORTHO05D007531 6.9e-06 56.6 39 61.5
Oeu013488.1 Olea europaea HOM05D005725 ORTHO05D007531 9.0e-06 56.2 171 26.9


User provided reference genes

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