Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G17080 Arabidopsis thaliana HOM05D009118 ORTHO05D011494 5.2e-157 557.8 299 100.0
BolC3t13438H Brassica oleracea HOM05D009118 ORTHO05D011494 1.8e-56 223.8 243 51.0
BolC3t13441H Brassica oleracea HOM05D009118 ORTHO05D011494 2.8e-54 216.5 243 49.4
BcaB01g05231 Brassica carinata HOM05D009118 ORTHO05D011494 1.1e-53 214.5 243 48.6
C03p09400 Brassica napus HOM05D009118 ORTHO05D011494 1.1e-53 214.5 243 48.6
BcaB01g04957 Brassica carinata HOM05D009118 ORTHO05D011494 2.7e-52 209.9 268 48.1
BcaB01g04959 Brassica carinata HOM05D009118 ORTHO05D011494 1.0e-51 208.0 248 48.0
BolC3t13443H Brassica oleracea HOM05D009118 ORTHO05D011494 2.0e-44 183.7 201 49.8
AL6G28100 Arabidopsis lyrata HOM05D009118 ORTHO05D011494 2.9e-38 163.3 226 40.7
Carub.0006s1526 Capsella rubella HOM05D009118 ORTHO05D011494 3.7e-38 162.9 262 37.0
BolC3t13434H Brassica oleracea HOM05D009118 ORTHO05D011494 3.4e-31 139.8 147 49.0
AL3G17210 Arabidopsis lyrata HOM05D009118 ORTHO05D011494 4.7e-25 119.4 235 33.6
A10p02270 Brassica napus HOM05D009118 ORTHO05D011494 6.2e-25 119.0 217 35.0
AL1G13260 Arabidopsis lyrata HOM05D009118 ORTHO05D011494 3.1e-24 116.7 251 33.9
BolC5t34750H Brassica oleracea HOM05D009118 ORTHO05D011494 1.5e-23 114.4 213 31.9
AL3G16050 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 1.7e-22 110.9 197 31.0
AL3G17230 Arabidopsis lyrata HOM05D009118 ORTHO05D011494 6.4e-22 109.0 224 30.8
BraA03t10138Z Brassica rapa HOM05D009118 ORTHO05D011494 2.1e-20 104.0 121 48.8
AT5G17140 Arabidopsis thaliana HOM05D009118 ORTHO05D011494 1.3e-19 101.3 112 42.9
BolC9t58842H Brassica oleracea HOM05D029610 ORTHO05D026814 3.9e-19 99.8 224 32.1
AT1G03720 Arabidopsis thaliana HOM05D009118 ORTHO05D011494 6.6e-19 99.0 186 33.9
C08p14910 Brassica napus HOM05D009118 ORTHO05D011494 4.3e-18 96.3 84 51.2
BraA10t42493Z Brassica rapa HOM05D009118 ORTHO05D011494 4.3e-18 96.3 189 33.9
BcaB02g06908 Brassica carinata HOM05D009118 ORTHO05D011494 1.1e-16 91.7 240 31.2
AL6G28180 Arabidopsis lyrata HOM05D009118 ORTHO05D011494 2.0e-15 87.4 84 42.9
CARHR196100 Cardamine hirsuta HOM05D009118 ORTHO05D011494 2.6e-15 87.0 129 37.2
C09p60070 Brassica napus HOM05D029610 ORTHO05D026814 7.6e-15 85.5 260 28.8
CARHR079810 Cardamine hirsuta HOM05D017090 ORTHO05D018449 1.3e-14 84.7 221 29.0
Thhalv10009679m.g Eutrema salsugineum HOM05D009118 ORTHO05D011494 6.4e-14 82.4 260 26.9
BolC5t34839H Brassica oleracea HOM05D017090 ORTHO05D018449 1.1e-13 81.6 216 25.9
C05p60950 Brassica napus HOM05D009118 ORTHO05D011494 3.2e-13 80.1 138 31.9
BraA09t35928Z Brassica rapa HOM05D022762 ORTHO05D023703 5.4e-13 79.3 211 29.9
BcaC05g29804 Brassica carinata HOM05D009118 ORTHO05D011494 6.0e-12 75.9 152 28.3
THA.LOC104809074 Tarenaya hassleriana HOM05D000069 ORTHO05D025459 3.3e-10 70.1 211 28.0
AT5G17130 Arabidopsis thaliana HOM05D029610 ORTHO05D026814 7.3e-10 68.9 115 41.7
AL6G28170 Arabidopsis lyrata HOM05D029610 ORTHO05D026814 2.8e-09 67.0 112 36.6
THA.LOC104801556 Tarenaya hassleriana HOM05D002279 ORTHO05D002644 2.4e-08 63.9 192 27.1
BolC3t14803H Brassica oleracea HOM05D022762 ORTHO05D023703 5.3e-08 62.8 177 27.1
C03p24110 Brassica napus HOM05D022762 ORTHO05D023703 6.9e-08 62.4 177 27.1
AL304U10020 Arabidopsis lyrata HOM05D017090 ORTHO05D018449 1.2e-07 61.6 283 23.7
AL304U10040 Arabidopsis lyrata HOM05D017090 ORTHO05D018449 9.9e-07 58.5 151 25.8
BcaC05g30122 Brassica carinata HOM05D017090 ORTHO05D018449 9.9e-07 58.5 114 28.1
A09p37220 Brassica napus HOM05D000069 ORTHO05D000060 6.4e-06 55.8 208 27.4
A09p37270 Brassica napus HOM05D000069 ORTHO05D000060 6.4e-06 55.8 208 27.4
Haze_27386 Corylus avellana HOM05D000069 ORTHO05D015629 8.4e-06 55.5 68 38.2


User provided reference genes

Program Settings