Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G16810 Arabidopsis thaliana HOM05D007064 ORTHO05D008772 2.2e-238 828.6 419 100.0
AL6G27830 Arabidopsis lyrata HOM05D007064 ORTHO05D008772 5.1e-227 790.8 419 95.0
Sp6g27320 Schrenkiella parvula HOM05D007064 ORTHO05D008772 2.4e-216 755.4 419 90.5
Thhalv10013656m.g Eutrema salsugineum HOM05D007064 ORTHO05D008772 6.9e-216 753.8 419 90.5
BolC2t06775H Brassica oleracea HOM05D007064 ORTHO05D008772 7.4e-210 733.8 420 88.8
BcaC03g18516 Brassica carinata HOM05D007064 ORTHO05D008772 1.7e-209 732.6 420 88.6
C02p08600 Brassica napus HOM05D007064 ORTHO05D008772 1.7e-209 732.6 420 88.6
BcaNung04953 Brassica carinata HOM05D007064 ORTHO05D008772 1.2e-207 726.5 419 87.8
BraA02t05344Z Brassica rapa HOM05D007064 ORTHO05D008772 5.3e-200 701.0 426 85.4
A02p03790 Brassica napus HOM05D007064 ORTHO05D008772 9.4e-197 690.3 428 83.2
Aa31LG11G12770 Aethionema arabicum HOM05D007064 ORTHO05D008772 1.3e-190 669.8 447 78.5
THA.LOC104820893 Tarenaya hassleriana HOM05D007064 ORTHO05D008772 6.3e-185 651.0 436 75.7
CARHR196350 Cardamine hirsuta HOM05D007064 ORTHO05D008772 2.5e-165 585.9 322 90.7
CSS0020222 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 6.8e-155 551.2 384 72.1
CsaV3_3G050060 Cucumis sativus L. HOM05D007064 ORTHO05D008772 6.8e-155 551.2 380 72.4
CiPaw.05G216200 Carya illinoinensis HOM05D007064 ORTHO05D008772 2.0e-154 549.7 396 69.9
CSS0020425 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 4.4e-154 548.5 384 71.9
Gohir.A11G303500 Gossypium hirsutum HOM05D007064 ORTHO05D008772 4.4e-154 548.5 389 71.0
QL09p023233 Quercus lobata HOM05D007064 ORTHO05D008772 4.4e-154 548.5 394 70.8
Gorai.007G348800 Gossypium raimondii HOM05D007064 ORTHO05D008772 5.8e-154 548.1 409 68.5
Thecc.05G215700 Theobroma cacao HOM05D007064 ORTHO05D008772 5.8e-154 548.1 389 71.7
Haze_00398 Corylus avellana HOM05D007064 ORTHO05D008772 9.8e-154 547.4 388 72.4
CANSAT78G1989 Cannabis sativa HOM05D007064 ORTHO05D008772 1.3e-153 547.0 369 74.8
TAR629G0708 Trochodendron aralioides HOM05D007064 ORTHO05D008772 2.2e-153 546.2 390 70.3
Duzib106G1646 Durio zibethinus HOM05D007064 ORTHO05D008772 4.6e-151 538.5 400 69.2
GSVIVG01024376001 Vitis vinifera HOM05D007064 ORTHO05D008772 6.0e-151 538.1 394 69.3
Sabra19G0062000 Salix brachista HOM05D007064 ORTHO05D008772 2.3e-150 536.2 382 73.6
COL.COLO4_15235 Corchorus olitorius HOM05D007064 ORTHO05D008772 1.1e-149 533.9 372 72.8
Rhsim03G0222700 Rhododendron simsii HOM05D007064 ORTHO05D008772 4.3e-149 531.9 432 64.4
Cfa016048 Carpinus fangiana HOM05D007064 ORTHO05D008772 5.6e-149 531.6 388 70.9
Nn1g00178 Nelumbo nucifera HOM05D007064 ORTHO05D008772 5.6e-149 531.6 416 65.4
TWI60G0820 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 3.6e-148 528.9 388 69.6
Actinidia34318 Actinidia chinensis HOM05D007064 ORTHO05D008772 2.6e-146 522.7 411 66.4
MD13G1202900 Malus domestica HOM05D007064 ORTHO05D008772 4.4e-146 521.9 383 68.9
Migut.F00087 Erythranthe guttata HOM05D007064 ORTHO05D008772 5.8e-146 521.5 384 68.0
Ciclev10020357m.g Citrus clementina HOM05D007064 ORTHO05D008772 7.6e-146 521.2 389 69.7
Carub.0006s1503 Capsella rubella HOM05D007064 ORTHO05D008772 9.9e-146 520.8 276 94.6
arahy.Tifrunner.gnm1.ann1.P291P9 Arachis hypogaea HOM05D007064 ORTHO05D008772 1.3e-145 520.4 385 69.6
Ah.04g156400 Amaranthus hybridus HOM05D007064 ORTHO05D008772 6.4e-145 518.1 372 69.6
Solyc03g097130.3 Solanum lycopersicum HOM05D007064 ORTHO05D008772 1.1e-144 517.3 415 65.5
Hund09801 Selenicereus undatus HOM05D007064 ORTHO05D000105 1.4e-144 516.9 372 69.4
CAN.G1131.22 Capsicum annuum HOM05D007064 ORTHO05D008772 2.4e-144 516.2 381 69.8
arahy.Tifrunner.gnm1.ann1.EDBW82 Arachis hypogaea HOM05D007064 ORTHO05D008772 3.2e-144 515.8 385 69.1
RcHm_v2.0_Chr4g0388921 Rosa chinensis HOM05D007064 ORTHO05D008772 3.2e-144 515.8 368 70.4
Nitab4.5_0004530g0030 Nicotiana tabacum HOM05D007064 ORTHO05D008772 5.4e-144 515.0 418 64.6
Nitab4.5_0000021g0660 Nicotiana tabacum HOM05D007064 ORTHO05D008772 7.1e-144 514.6 418 64.8
PSO063G1297 Papaver somniferum HOM05D007064 ORTHO05D008772 7.1e-144 514.6 414 63.3
PGSC0003DMG400003147 Solanum tuberosum HOM05D007064 ORTHO05D008772 9.2e-144 514.2 415 65.5
Glyma.11G009700 Glycine max HOM05D007064 ORTHO05D008772 1.2e-143 513.8 366 69.9
FAN12G0288 Fragaria x ananassa HOM05D007064 ORTHO05D008772 2.7e-143 512.7 387 68.2
Aqoxy3G02225 Aquilegia oxysepala HOM05D007064 ORTHO05D008772 4.6e-143 511.9 373 68.4
FvH4_4g01950 Fragaria vesca HOM05D007064 ORTHO05D008772 6.0e-143 511.5 387 68.0
EL10Ac3g05060 Beta vulgaris HOM05D007064 ORTHO05D008772 7.8e-143 511.1 372 67.2
SGA_v2.0_scaffold44G16901 Striga asiatica HOM05D007064 ORTHO05D008772 1.3e-142 510.4 381 66.9
Sc19g0000100 Simmondsia chinensis HOM05D007064 ORTHO05D008772 2.3e-142 509.6 371 69.3
VMungo1215G2591 Vigna mungo HOM05D007064 ORTHO05D008772 3.9e-142 508.8 366 68.6
ClCG09G013090 Citrullus lanatus HOM05D007064 ORTHO05D008772 1.5e-141 506.9 357 70.6
Atru.chr12.1880 Acer truncatum HOM05D007064 ORTHO05D008772 1.9e-141 506.5 421 65.8
LjContig00222g0020502 Lotus japonicus HOM05D007064 ORTHO05D008772 1.2e-140 503.8 382 68.6
PSO782G0881 Papaver somniferum HOM05D007064 ORTHO05D008772 1.2e-140 503.8 397 64.7
Phvul.002G040600 Phaseolus vulgaris HOM05D007064 ORTHO05D008772 2.1e-140 503.1 366 67.8
Cc02_g00210 Coffea canephora HOM05D007064 ORTHO05D008772 1.8e-139 500.0 384 67.2
Lalb_Chr09g0320151 Lupinus albus HOM05D007064 ORTHO05D008772 2.6e-138 496.1 376 67.8
AUR62028195 Chenopodium quinoa HOM05D007064 ORTHO05D008772 4.4e-138 495.4 372 66.9
Gohir.D11G318800 Gossypium hirsutum HOM05D007064 ORTHO05D008772 2.9e-137 492.7 344 70.3
Lsat_1_v5_gn_2_95061 Lactuca sativa HOM05D007064 ORTHO05D008772 4.9e-137 491.9 368 66.8
ECA238G0775 Erigeron canadensis HOM05D007064 ORTHO05D008772 9.3e-136 487.6 376 64.9
TWI60G1094 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 1.2e-135 487.3 366 69.1
TPR.G37970 Trifolium pratense HOM05D007064 ORTHO05D008772 1.6e-135 486.9 378 66.9
Medtr5g006230 Medicago truncatula HOM05D007064 ORTHO05D008772 2.7e-135 486.1 367 68.7
HanXRQChr14g0451581 Helianthus annuus HOM05D007064 ORTHO05D008772 2.5e-133 479.6 368 65.8
SalBow4G1574 Salvia bowleyana HOM05D007064 ORTHO05D008772 2.5e-133 479.6 372 65.6
ATR0829G191 Amborella trichopoda HOM05D007064 ORTHO05D008772 3.3e-133 479.2 389 64.0
Ca_24438_v3 Cicer arietinum L. HOM05D007064 ORTHO05D008772 4.8e-132 475.3 370 65.4
SalBow4G1678 Salvia bowleyana HOM05D007064 ORTHO05D008772 8.1e-132 474.6 378 64.8
AUR62002078 Chenopodium quinoa HOM05D007064 ORTHO05D008772 1.7e-129 466.8 398 62.6
MELO3C003312.2 Cucumis melo HOM05D007064 ORTHO05D008772 3.2e-128 462.6 332 70.2
Zm00001eb187800 Zea mays HOM05D007064 ORTHO05D008772 9.3e-128 461.1 394 60.4
Os02g0694800 Oryza sativa ssp. japonica HOM05D007064 ORTHO05D008772 3.9e-126 455.7 395 60.0
Lj1A1033T73 Lonicera japonica HOM05D007064 ORTHO05D008772 5.6e-125 451.8 320 73.1
Prupe.1G025200 Prunus persica HOM05D007064 ORTHO05D008772 2.8e-124 449.5 318 71.4
Dinv17250 Davidia involucrata HOM05D007064 ORTHO05D008772 6.2e-124 448.4 336 69.3
HPP92_025673 Vanilla planifolia HOM05D007064 ORTHO05D008772 9.9e-122 441.0 382 61.0
Peaxi162Scf00516g00675 Petunia axillaris HOM05D007064 ORTHO05D008772 3.5e-119 432.6 379 61.2
vmacro06523 Vaccinium macrocarpon HOM05D007064 ORTHO05D008772 4.6e-119 432.2 413 57.6
CDE11G0292 Ceratophyllum demersum HOM05D007064 ORTHO05D008772 2.5e-117 426.4 366 60.7
SEGI_11081 Sequoiadendron giganteum HOM05D007064 ORTHO05D008772 7.4e-117 424.9 407 56.3
Potri.019G050500 Populus trichocarpa HOM05D007064 ORTHO05D008772 8.2e-116 421.4 315 72.1
Sed0013285 Sechium edule HOM05D007064 ORTHO05D008772 4.9e-113 412.1 289 71.3
Manes.09G127400 Manihot esculenta HOM05D007064 ORTHO05D008772 2.1e-111 406.8 337 66.2
Psat2g189080 Pisum sativum HOM05D007064 ORTHO05D008772 5.7e-109 398.7 317 66.2
Hma1.2p1_0649F.1_g195260 Hydrangea macrophylla HOM05D007064 ORTHO05D008772 1.3e-105 387.5 281 70.1
Eucgr.K00080 Eucalyptus grandis HOM05D007064 ORTHO05D008772 1.9e-104 383.6 265 73.6
Pp3c23_10770 Physcomitrium patens HOM05D007064 ORTHO05D008772 4.6e-103 379.0 425 49.6
Mapoly0096s0061 Marchantia polymorpha HOM05D007064 ORTHO05D008772 1.1e-101 374.4 422 49.5
Sopen03g027870 Solanum pennellii HOM05D007064 ORTHO05D008772 5.7e-101 372.1 280 68.2
Glyma.01G233100 Glycine max HOM05D007064 ORTHO05D008772 6.7e-94 348.6 320 58.1
Oeu038089.3 Olea europaea HOM05D007064 ORTHO05D008772 6.1e-87 325.5 391 49.6
AagrBONN_evm.TU.Sc2ySwM_344.2887 Anthoceros agrestis HOM05D007064 ORTHO05D008772 3.5e-66 256.5 357 43.1
SMO343G0012 Selaginella moellendorffii HOM05D007064 ORTHO05D008772 3.7e-60 236.5 424 36.8
Cpa.g.sc43.97 Carica papaya HOM05D007064 ORTHO05D008772 2.1e-47 194.1 146 67.1
CBR_g8898 Chara braunii HOM05D007064 ORTHO05D008772 3.0e-41 173.7 125 65.6
Psat0s4094g0040 Pisum sativum HOM05D007064 ORTHO05D008772 8.1e-39 165.6 105 74.3
CBR_g8900 Chara braunii HOM05D007064 ORTHO05D000002 3.2e-35 153.7 243 38.7
Oeu043948.1 Olea europaea HOM05D007064 ORTHO05D008772 2.1e-26 124.4 75 80.0
Cpa.g.sc43.98 Carica papaya HOM05D007064 ORTHO05D008772 1.7e-25 121.3 70 80.0
Lj1A1033G66 Lonicera japonica HOM05D007064 ORTHO05D008772 2.5e-16 90.9 53 77.4
TPR.G40530 Trifolium pratense HOM05D007064 ORTHO05D008772 1.6e-15 88.2 53 73.6
PRCOL_00004348 Prasinoderma coloniale HOM05D007064 ORTHO05D008772 3.1e-14 84.0 246 30.1
HanXRQChr01g0005821 Helianthus annuus HOM05D007064 ORTHO05D008772 1.2e-10 72.0 47 70.2
CBR_g6359 Chara braunii HOM05D007064 ORTHO05D008772 3.9e-09 67.0 96 40.6
MCO05G602 Micromonas commoda HOM05D007064 ORTHO05D008772 5.6e-08 63.2 415 24.1
SMO364G0095 Selaginella moellendorffii HOM05D002406 ORTHO05D007964 4.8e-07 60.1 347 23.1
CDE02G2223 Ceratophyllum demersum HOM05D002406 ORTHO05D007964 6.2e-07 59.7 262 24.4


User provided reference genes

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