Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 0.0e+00 1340.1 674 100.0
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 0.0e+00 1191.4 685 88.9
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 5.6e-308 1060.4 692 79.6
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 6.0e-286 987.3 698 75.1
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 5.2e-282 974.2 696 74.4
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 8.7e-269 930.2 678 73.9
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 9.7e-252 873.6 697 69.4
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 1.7e-243 846.3 695 66.6
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 4.1e-242 841.6 694 67.9
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 9.1e-242 840.5 699 67.1
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 6.1e-238 827.8 698 66.5
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 1.2e-190 670.6 724 54.6
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 4.5e-156 555.8 738 46.9
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 7.7e-116 422.2 757 39.5
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 7.7e-108 395.6 593 42.0
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 3.6e-105 386.7 563 43.9
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 4.7e-105 386.3 670 39.6
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 4.7e-105 386.3 486 45.3
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 6.1e-105 386.0 647 39.4
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 6.1e-105 386.0 706 37.7
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 5.2e-104 382.9 643 40.4
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 6.8e-104 382.5 564 42.4
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 8.8e-104 382.1 562 43.4
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 1.5e-103 381.3 682 39.4
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 1.7e-102 377.9 681 38.6
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 1.7e-102 377.9 383 52.0
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 2.2e-102 377.5 606 41.1
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 2.8e-102 377.1 629 39.4
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 3.7e-102 376.7 439 48.7
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 6.3e-102 375.9 687 38.0
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 1.1e-101 375.2 405 48.9
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 2.4e-101 374.0 565 42.5
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 3.1e-101 373.6 323 57.6
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 4.1e-101 373.2 321 58.6
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 5.3e-101 372.9 362 55.5
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 5.3e-101 372.9 257 68.9
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 5.9e-100 369.4 540 43.7
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 7.7e-100 369.0 660 39.4
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 1.0e-99 368.6 368 52.4
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 1.0e-99 368.6 540 43.7
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 1.7e-99 367.9 421 51.3
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 2.9e-99 367.1 665 39.8
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 5.0e-99 366.3 536 43.1
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 5.0e-99 366.3 403 49.9
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 1.5e-98 364.8 591 42.3
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 2.5e-98 364.0 371 51.8
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 3.2e-98 363.6 672 36.6
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 3.2e-98 363.6 321 57.9
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 2.1e-97 360.9 639 39.6
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 3.6e-97 360.1 373 50.9
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 8.0e-97 359.0 538 42.6
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 8.0e-97 359.0 373 50.9
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 2.3e-96 357.5 320 57.8
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 2.3e-96 357.5 543 41.8
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 2.0e-95 354.4 315 57.5
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 7.5e-95 352.4 323 57.3
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 1.3e-94 351.7 327 54.7
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 1.3e-94 351.7 618 38.7
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 2.2e-94 350.9 352 54.0
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 3.7e-94 350.1 621 38.8
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 6.3e-94 349.4 335 55.2
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 8.3e-94 349.0 560 40.2
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 2.4e-93 347.4 306 56.9
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 4.1e-93 346.7 321 55.5
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 5.4e-93 346.3 573 41.9
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 2.0e-92 344.4 571 40.6
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 2.0e-92 344.4 673 36.3
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 4.5e-92 343.2 315 55.6
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 1.0e-91 342.0 553 41.2
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 1.0e-91 342.0 660 38.2
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 2.3e-91 340.9 392 49.7
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 2.9e-91 340.5 442 45.9
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 1.6e-89 334.7 379 48.3
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 4.7e-89 333.2 379 48.0
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 1.8e-88 331.3 325 53.5
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 6.3e-86 322.8 544 37.5
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 1.5e-82 311.6 391 45.3
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 3.4e-79 300.4 391 44.2
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 4.4e-79 300.1 467 44.1
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 1.9e-77 294.7 263 56.3
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 9.2e-77 292.4 209 66.5
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 6.0e-76 289.7 416 41.6
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 5.0e-75 286.6 305 50.2
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 5.6e-74 283.1 469 41.2
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 9.5e-74 282.3 186 69.4
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 1.2e-73 282.0 254 55.9
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 1.4e-72 278.5 323 47.1
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 2.6e-71 274.2 599 34.9
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 6.4e-70 269.6 459 41.0
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 1.6e-68 265.0 555 36.0
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 5.6e-66 256.5 203 61.6
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 1.8e-64 251.5 257 53.3
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 1.1e-58 232.3 340 39.7
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 3.1e-56 224.2 303 44.6
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 1.5e-55 221.9 177 62.7
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 1.6e-52 211.8 252 43.3
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 2.1e-49 201.4 260 48.5
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 8.1e-49 199.5 233 48.1
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 5.3e-48 196.8 473 32.8
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 3.2e-45 187.6 187 48.1
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 1.5e-42 178.7 120 67.5
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 1.8e-40 171.8 119 66.4
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 2.4e-40 171.4 536 29.9
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 1.1e-29 136.0 581 26.5
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 2.5e-21 108.2 172 41.9
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 2.5e-21 108.2 172 41.9
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 7.1e-21 106.7 137 47.4
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 4.6e-20 104.0 135 45.2


User provided reference genes

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