Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G15970 Arabidopsis thaliana HOM05D010783 ORTHO05D013000 1.4e-25 119.0 67 100.0
Carub.0006s1416 Capsella rubella HOM05D010783 ORTHO05D013000 1.5e-24 115.5 67 95.5
AT5G15960 Arabidopsis thaliana HOM05D010783 ORTHO05D013000 1.3e-23 112.5 67 92.5
Thhalv10015228m.g Eutrema salsugineum HOM05D010783 ORTHO05D013000 1.1e-17 92.8 63 82.5
CARHR197340 Cardamine hirsuta HOM05D010783 ORTHO05D013000 3.4e-16 87.8 63 79.4
Sp6g28150 Schrenkiella parvula HOM05D010783 ORTHO05D013000 7.6e-16 86.7 63 76.2
A02p03320 Brassica napus HOM05D010783 ORTHO05D013000 3.8e-15 84.3 63 73.0
BraA02t05303Z Brassica rapa HOM05D010783 ORTHO05D013000 3.8e-15 84.3 63 73.0
C09p61100 Brassica napus HOM05D010783 ORTHO05D013000 4.9e-15 84.0 63 73.0
BolC9t58953H Brassica oleracea HOM05D010783 ORTHO05D013000 4.9e-15 84.0 63 73.0
A10p23100 Brassica napus HOM05D010783 ORTHO05D013000 1.4e-14 82.4 63 71.4
BraA10t44378Z Brassica rapa HOM05D010783 ORTHO05D013000 1.4e-14 82.4 63 71.4
BcaB08g36874 Brassica carinata HOM05D010783 ORTHO05D013000 4.2e-14 80.9 63 71.4
C02p08090 Brassica napus HOM05D010783 ORTHO05D013000 5.5e-14 80.5 63 69.8
BolC2t06731H Brassica oleracea HOM05D010783 ORTHO05D013000 5.5e-14 80.5 63 69.8
BcaC03g18462 Brassica carinata HOM05D010783 ORTHO05D013000 7.1e-14 80.1 63 69.8
BcaNung02219 Brassica carinata HOM05D010783 ORTHO05D013000 1.6e-13 79.0 63 69.8
BcaC04g18920 Brassica carinata HOM05D010783 ORTHO05D013000 2.3e-12 75.1 63 69.8
BcaC09g47705 Brassica carinata HOM05D002873 ORTHO05D002978 3.4e-08 61.2 66 53.0
BNapus_Darmor_BZH_scaffold_208p00010 Brassica napus HOM05D002873 ORTHO05D002978 3.4e-08 61.2 66 53.0
BolC1t05901H Brassica oleracea HOM05D002873 ORTHO05D002978 3.4e-08 61.2 66 53.0
BraSC141t45633Z Brassica rapa HOM05D002873 ORTHO05D002978 3.4e-08 61.2 66 53.0
BNapus_Darmor_BZH_scaffold_122p00010 Brassica napus HOM05D002873 ORTHO05D002978 4.5e-08 60.8 66 53.0
BNapus_Darmor_BZH_scaffold_99p00020 Brassica napus HOM05D002873 ORTHO05D002978 4.5e-08 60.8 66 53.0
BolC1t05900H Brassica oleracea HOM05D002873 ORTHO05D002978 4.5e-08 60.8 66 53.0
AL3G11800 Arabidopsis lyrata HOM05D002873 ORTHO05D002978 1.7e-07 58.9 66 48.5
Thhalv10015740m.g Eutrema salsugineum HOM05D010783 ORTHO05D013000 1.7e-07 58.9 41 80.5
Carub.0003s0158 Capsella rubella HOM05D002873 ORTHO05D002978 2.2e-07 58.5 66 48.5
AT3G02480 Arabidopsis thaliana HOM05D002873 ORTHO05D002978 6.5e-07 57.0 66 48.5
BcaC01g04444 Brassica carinata HOM05D002873 ORTHO05D002978 1.1e-06 56.2 67 49.3
C03p40070 Brassica napus HOM05D002873 ORTHO05D002978 1.1e-06 56.2 67 49.3
BolC3t16273H Brassica oleracea HOM05D002873 ORTHO05D002978 1.1e-06 56.2 67 49.3
GSVIVG01036492001 Vitis vinifera HOM05D002873 ORTHO05D002978 9.3e-06 53.1 67 43.3


User provided reference genes

Program Settings