Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G15000 Arabidopsis thaliana HOM05D009469 ORTHO05D011620 2.0e-52 208.8 99 100.0
AL6G25820 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 1.8e-42 175.6 98 83.7
AL2G22570 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 8.6e-40 166.8 97 82.5
AL6G25800 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 2.6e-36 155.2 97 79.4
Sp6g29040 Schrenkiella parvula HOM05D009469 ORTHO05D011620 6.6e-32 140.6 97 71.1
AT5G14995 Arabidopsis thaliana HOM05D009469 ORTHO05D011620 1.4e-29 132.9 99 68.7
Carub.0006s1316 Capsella rubella HOM05D009469 ORTHO05D011620 1.8e-26 122.5 89 65.2
Thhalv10015392m.g Eutrema salsugineum HOM05D009469 ORTHO05D011620 1.6e-25 119.4 97 59.8
CARHR198310 Cardamine hirsuta HOM05D009469 ORTHO05D011620 4.6e-25 117.9 114 54.4
BcaC03g13437 Brassica carinata HOM05D009469 ORTHO05D011620 4.3e-15 84.7 81 51.9
THA.LOC104798617 Tarenaya hassleriana HOM05D009469 ORTHO05D011620 3.4e-12 75.1 97 35.1
THA.LOC104824563 Tarenaya hassleriana HOM05D002657 ORTHO05D003059 6.4e-11 70.9 63 42.9
THA.LOC109117075 Tarenaya hassleriana HOM05D002657 ORTHO05D012605 6.4e-11 70.9 63 42.9
BraA02t05255Z Brassica rapa HOM05D007562 ORTHO05D009721 8.3e-11 70.5 79 44.3
A02p02820 Brassica napus HOM05D007562 ORTHO05D009721 1.4e-10 69.7 58 53.4
BolC2t06675H Brassica oleracea HOM05D000286 ORTHO05D009721 1.4e-10 69.7 79 44.3
C02p07440 Brassica napus HOM05D007562 ORTHO05D009721 2.4e-10 68.9 58 53.4
Carub.0008s1729 Capsella rubella HOM05D009469 ORTHO05D011620 2.1e-09 65.9 63 41.3
A01p27840 Brassica napus HOM05D009469 ORTHO05D011620 2.7e-09 65.5 89 32.6
BraA01t02921Z Brassica rapa HOM05D009469 ORTHO05D011620 2.7e-09 65.5 89 32.6
BraA01t02924Z Brassica rapa HOM05D009469 ORTHO05D011620 2.7e-09 65.5 89 32.6
BraA01t02925Z Brassica rapa HOM05D009469 ORTHO05D011620 2.7e-09 65.5 89 32.6
AT2G22155 Arabidopsis thaliana HOM05D010340 ORTHO05D012605 4.6e-09 64.7 91 35.2
Carub.0008s2240 Capsella rubella HOM05D009469 ORTHO05D011620 4.6e-09 64.7 97 32.0
Carub.0003s0079 Capsella rubella HOM05D008131 ORTHO05D010989 1.0e-08 63.5 95 36.8
Thhalv10017888m.g Eutrema salsugineum HOM05D008131 ORTHO05D010989 5.1e-08 61.2 99 35.4
AL4G11500 Arabidopsis lyrata HOM05D010340 ORTHO05D012605 6.6e-08 60.8 84 36.9
AL8G38430 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 6.6e-08 60.8 94 29.8
AL8G38470 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 6.6e-08 60.8 94 29.8
AL449U10010 Arabidopsis lyrata HOM05D010340 ORTHO05D012605 8.6e-08 60.5 65 36.9
AL4G11610 Arabidopsis lyrata HOM05D010340 ORTHO05D012605 8.6e-08 60.5 65 36.9
Duzib150G0010 Durio zibethinus HOM05D010340 ORTHO05D012605 8.6e-08 60.5 66 40.9
AT2G22145 Arabidopsis thaliana HOM05D010340 ORTHO05D012605 1.1e-07 60.1 84 33.3
AT3G45285 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 3.3e-07 58.5 98 33.7
THA.LOC104817591 Tarenaya hassleriana HOM05D008416 ORTHO05D037782 7.3e-07 57.4 69 40.6
THA.LOC104817592 Tarenaya hassleriana HOM05D008416 ORTHO05D037782 7.3e-07 57.4 69 40.6
C01p35370 Brassica napus HOM05D009469 ORTHO05D011620 9.5e-07 57.0 88 29.5
BolC1t03493H Brassica oleracea HOM05D009469 ORTHO05D011620 9.5e-07 57.0 88 29.5
Sp3g00750 Schrenkiella parvula HOM05D008131 ORTHO05D010989 9.5e-07 57.0 89 38.2
Gohir.D07G128600 Gossypium hirsutum HOM05D001603 ORTHO05D001393 1.2e-06 56.6 63 38.1
Gorai.001G138900 Gossypium raimondii HOM05D001603 ORTHO05D001393 1.2e-06 56.6 63 38.1
Rhsim03G0252800 Rhododendron simsii HOM05D001603 ORTHO05D001393 1.6e-06 56.2 60 33.3
Carub.0003s0269 Capsella rubella HOM05D009469 ORTHO05D011620 2.1e-06 55.8 68 35.3
COL.COLO4_24892 Corchorus olitorius HOM05D001603 ORTHO05D001393 2.1e-06 55.8 59 37.3
AL7G52470 Arabidopsis lyrata HOM05D008416 ORTHO05D010671 6.2e-06 54.3 66 34.8
AT2G25312 Arabidopsis thaliana HOM05D008416 ORTHO05D010671 8.1e-06 53.9 98 32.7


User provided reference genes

Program Settings