Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G14995 Arabidopsis thaliana HOM05D009469 ORTHO05D011620 1.5e-52 209.1 102 100.0
AL6G25800 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 1.1e-34 149.8 102 76.5
AL6G25820 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 4.0e-32 141.4 102 72.5
AL2G22570 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 5.2e-32 141.0 102 71.6
AT5G15000 Arabidopsis thaliana HOM05D009469 ORTHO05D011620 2.0e-28 129.0 99 68.7
Sp6g29040 Schrenkiella parvula HOM05D009469 ORTHO05D011620 9.5e-26 120.2 98 65.3
Thhalv10015392m.g Eutrema salsugineum HOM05D009469 ORTHO05D011620 1.6e-20 102.8 92 57.6
Carub.0006s1316 Capsella rubella HOM05D009469 ORTHO05D011620 2.3e-19 99.0 84 59.5
CARHR198310 Cardamine hirsuta HOM05D009469 ORTHO05D011620 5.0e-19 97.8 109 47.7
BcaC03g13437 Brassica carinata HOM05D009469 ORTHO05D011620 3.3e-18 95.1 81 58.0
A02p02820 Brassica napus HOM05D007562 ORTHO05D009721 4.9e-14 81.3 57 63.2
BraA02t05255Z Brassica rapa HOM05D007562 ORTHO05D009721 6.4e-14 80.9 56 64.3
C02p07440 Brassica napus HOM05D007562 ORTHO05D009721 8.3e-14 80.5 57 63.2
BolC2t06675H Brassica oleracea HOM05D000286 ORTHO05D009721 1.1e-13 80.1 56 64.3
THA.LOC104824563 Tarenaya hassleriana HOM05D002657 ORTHO05D003059 1.2e-09 66.6 85 30.6
THA.LOC109117075 Tarenaya hassleriana HOM05D002657 ORTHO05D012605 2.1e-09 65.9 85 30.6
Carub.0008s2240 Capsella rubella HOM05D009469 ORTHO05D011620 3.1e-08 62.0 95 32.6
Carub.0003s0079 Capsella rubella HOM05D008131 ORTHO05D010989 4.0e-08 61.6 91 40.7
A01p27840 Brassica napus HOM05D009469 ORTHO05D011620 8.9e-08 60.5 64 39.1
BraA01t02921Z Brassica rapa HOM05D009469 ORTHO05D011620 8.9e-08 60.5 64 39.1
BraA01t02924Z Brassica rapa HOM05D009469 ORTHO05D011620 8.9e-08 60.5 64 39.1
BraA01t02925Z Brassica rapa HOM05D009469 ORTHO05D011620 8.9e-08 60.5 64 39.1
Duzib150G0010 Durio zibethinus HOM05D010340 ORTHO05D012605 2.6e-07 58.9 70 41.4
AL8G38430 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 5.8e-07 57.8 95 32.6
AL8G38470 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 5.8e-07 57.8 95 32.6
Thhalv10017888m.g Eutrema salsugineum HOM05D008131 ORTHO05D010989 5.8e-07 57.8 99 32.3
Aa31LG4G14590 Aethionema arabicum HOM05D008416 ORTHO05D010671 1.7e-06 56.2 67 40.3
Sp3g00750 Schrenkiella parvula HOM05D008131 ORTHO05D010989 2.2e-06 55.8 80 38.8
BolC1t05952H Brassica oleracea HOM05D008131 ORTHO05D010989 2.9e-06 55.5 87 36.8
COL.COLO4_24892 Corchorus olitorius HOM05D001603 ORTHO05D001393 2.9e-06 55.5 83 34.9
Thhalv10006373m.g Eutrema salsugineum HOM05D008131 ORTHO05D010989 2.9e-06 55.5 92 32.6
BcaC05g30404 Brassica carinata HOM05D008131 ORTHO05D010989 4.9e-06 54.7 99 36.4
BraA05t23190Z Brassica rapa HOM05D008131 ORTHO05D010989 4.9e-06 54.7 99 35.4
Thhalv10017595m.g Eutrema salsugineum HOM05D008131 ORTHO05D010989 4.9e-06 54.7 79 40.5
Aa31LG4G14580 Aethionema arabicum HOM05D008416 ORTHO05D010671 6.4e-06 54.3 65 38.5
AT2G22145 Arabidopsis thaliana HOM05D010340 ORTHO05D012605 6.4e-06 54.3 72 34.7
BolC5t35139H Brassica oleracea HOM05D008131 ORTHO05D010989 8.3e-06 53.9 58 39.7


User provided reference genes

Program Settings