Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G14770 Arabidopsis thaliana HOM05D007570 ORTHO05D009365 2.6e-202 709.9 941 100.0
AL6G25570 Arabidopsis lyrata HOM05D007570 ORTHO05D009365 1.9e-181 640.6 941 93.1
Carub.0006s1294 Capsella rubella HOM05D007570 ORTHO05D009365 1.6e-156 557.8 941 89.6
Thhalv10012597m.g Eutrema salsugineum HOM05D007570 ORTHO05D009365 2.1e-156 557.4 939 90.1
Sp6g29270 Schrenkiella parvula HOM05D007570 ORTHO05D009365 2.4e-152 543.9 940 89.4
BolC9t59076H Brassica oleracea HOM05D007570 ORTHO05D009365 5.3e-139 499.6 941 85.4
BraA10t44455Z Brassica rapa HOM05D007570 ORTHO05D009365 5.0e-137 493.0 941 86.5
BcaB08g36948 Brassica carinata HOM05D007570 ORTHO05D009365 8.4e-137 492.3 941 85.3
BcaC04g19010 Brassica carinata HOM05D007570 ORTHO05D009365 1.2e-135 488.4 940 86.4
C09p62380 Brassica napus HOM05D007570 ORTHO05D009365 6.1e-135 486.1 941 85.1
A10p23910 Brassica napus HOM05D007570 ORTHO05D009365 2.4e-131 474.2 941 85.8
CARHR198540 Cardamine hirsuta HOM05D007570 ORTHO05D009365 1.7e-105 388.3 939 83.6
Aa31LG11G14680 Aethionema arabicum HOM05D007570 ORTHO05D009365 2.3e-33 148.7 116 68.1
Aa31LG11G14690 Aethionema arabicum HOM05D007570 ORTHO05D009365 6.7e-33 147.1 132 79.5
Ca_18529_v3 Cicer arietinum L. HOM05D001301 ORTHO05D009365 2.2e-20 105.5 144 40.3
Ciclev10030585m.g Citrus clementina HOM05D007570 ORTHO05D009365 5.0e-20 104.4 187 35.3
Medtr4g089005 Medicago truncatula HOM05D007570 ORTHO05D009365 6.5e-20 104.0 145 41.4
CiPaw.05G211100 Carya illinoinensis HOM05D007570 ORTHO05D009365 1.4e-19 102.8 173 37.6
Lj4g0005287 Lotus japonicus HOM05D007570 ORTHO05D009365 1.9e-19 102.4 144 41.0
Psat7g112960 Pisum sativum HOM05D007570 ORTHO05D009365 3.2e-19 101.7 171 36.3
Sabra19G0053700 Salix brachista HOM05D007570 ORTHO05D009365 7.2e-19 100.5 187 38.0
Thecc.05G226900 Theobroma cacao HOM05D007570 ORTHO05D009365 7.2e-19 100.5 198 36.9
VMungo0251G2923 Vigna mungo HOM05D007570 ORTHO05D009365 7.2e-19 100.5 144 39.6
Glyma.07G194900 Glycine max HOM05D007570 ORTHO05D009365 9.3e-19 100.1 144 38.9
Lalb_Chr16g0383631 Lupinus albus HOM05D007570 ORTHO05D009365 9.3e-19 100.1 142 40.1
Potri.019G043101 Populus trichocarpa HOM05D007570 ORTHO05D009365 1.2e-18 99.8 179 38.5
Duzib106G0838 Durio zibethinus HOM05D007570 ORTHO05D009365 2.1e-18 99.0 181 36.5
Gorai.002G249100 Gossypium raimondii HOM05D007570 ORTHO05D009365 2.1e-18 99.0 181 37.6
Gohir.A01G216000 Gossypium hirsutum HOM05D007570 ORTHO05D009365 2.7e-18 98.6 181 37.6
Medtr8g064830 Medicago truncatula HOM05D007570 ORTHO05D009365 2.7e-18 98.6 153 39.2
PSO210G6895 Papaver somniferum HOM05D007570 ORTHO05D009365 2.7e-18 98.6 144 35.4
PSO832G0129 Papaver somniferum HOM05D007570 ORTHO05D009365 2.7e-18 98.6 144 35.4
TPR.G12015 Trifolium pratense HOM05D007570 ORTHO05D009365 3.6e-18 98.2 195 33.3
MD11G1161200 Malus domestica HOM05D007570 ORTHO05D009365 4.6e-18 97.8 183 35.5
MD03G1142100 Malus domestica HOM05D007570 ORTHO05D009365 7.9e-18 97.1 175 35.4
Gohir.D01G204800 Gossypium hirsutum HOM05D007570 ORTHO05D009365 1.0e-17 96.7 181 37.0
Phvul.002G227100 Phaseolus vulgaris HOM05D007570 ORTHO05D009365 1.3e-17 96.3 144 38.2
Atru.chr6.18 Acer truncatum HOM05D007570 ORTHO05D009365 5.1e-17 94.4 171 35.1
TWI34G1038 Tripterygium wilfordii HOM05D007570 ORTHO05D009365 6.7e-17 94.0 206 34.5
FvH4_7g02371 Fragaria vesca HOM05D007570 ORTHO05D009365 1.1e-16 93.2 152 36.2
FAN06G1073 Fragaria x ananassa HOM05D007570 ORTHO05D009365 1.1e-16 93.2 152 36.2
Nitab4.5_0008329g0060 Nicotiana tabacum HOM05D001281 ORTHO05D009365 3.3e-16 91.7 145 56.6
Migut.O00416 Erythranthe guttata HOM05D007570 ORTHO05D009365 4.3e-16 91.3 271 28.8
Manes.08G159400 Manihot esculenta HOM05D007570 ORTHO05D009365 7.4e-16 90.5 201 37.3
arahy.Tifrunner.gnm1.ann1.3SI8EE Arachis hypogaea HOM05D000112 ORTHO05D009365 1.3e-15 89.7 144 35.4
arahy.Tifrunner.gnm1.ann1.K3ZWQ5 Arachis hypogaea HOM05D000112 ORTHO05D009365 1.3e-15 89.7 144 35.4
MD11G1161100 Malus domestica HOM05D007570 ORTHO05D009365 1.6e-15 89.4 175 53.1
Nitab4.5_0002344g0040 Nicotiana tabacum HOM05D007570 ORTHO05D009365 6.3e-15 87.4 146 37.0
CANSAT78G1681 Cannabis sativa HOM05D007570 ORTHO05D009365 1.1e-14 86.7 176 35.2
MD00G1202300 Malus domestica HOM05D007570 ORTHO05D009365 1.8e-14 85.9 385 63.6
Eucgr.F03126 Eucalyptus grandis HOM05D007570 ORTHO05D009365 4.1e-14 84.7 143 36.4
Lj5C421G19 Lonicera japonica HOM05D007570 ORTHO05D009365 5.3e-14 84.3 140 37.9
Solyc01g099530.3 Solanum lycopersicum HOM05D001281 ORTHO05D001139 6.9e-14 84.0 150 35.3
CSS0020002 Camellia sinensis var. sinensis HOM05D007570 ORTHO05D009365 2.6e-13 82.0 140 38.6
CSS0011257 Camellia sinensis var. sinensis HOM05D007570 ORTHO05D009365 5.9e-13 80.9 140 38.6
Migut.N02077 Erythranthe guttata HOM05D007570 ORTHO05D009365 1.0e-12 80.1 257 28.8
Aqoxy5G04288 Aquilegia oxysepala HOM05D007570 ORTHO05D009365 1.7e-12 79.3 186 32.8
FAN01G3111 Fragaria x ananassa HOM05D007570 ORTHO05D009365 1.7e-12 79.3 144 33.3
Cpa.g.sc909.2 Carica papaya HOM05D007570 ORTHO05D009365 3.8e-12 78.2 71 52.1
MSTRG.27980 Avicennia marina HOM05D007570 ORTHO05D009365 5.0e-12 77.8 139 34.5
Peaxi162Scf00037g01028 Petunia axillaris HOM05D007570 ORTHO05D009365 6.5e-12 77.4 148 35.1
Sc11g0002770 Simmondsia chinensis HOM05D007570 ORTHO05D009365 1.1e-11 76.6 239 26.4
Cfa016108 Carpinus fangiana HOM05D007570 ORTHO05D009365 3.2e-11 75.1 71 49.3
Eucgr.A02378 Eucalyptus grandis HOM05D007570 ORTHO05D009365 4.2e-11 74.7 141 32.6
Lsat_1_v5_gn_5_103340 Lactuca sativa HOM05D007570 ORTHO05D009365 5.5e-11 74.3 138 34.1
Dinv40321 Davidia involucrata HOM05D007570 ORTHO05D009365 1.6e-10 72.8 152 36.2
Prupe.2G007100 Prunus persica HOM05D007570 ORTHO05D009365 2.7e-10 72.0 64 54.7
PGR031G1904 Punica granatum HOM05D007570 ORTHO05D009365 4.6e-10 71.2 161 28.0
Sopen01g043040 Solanum pennellii HOM05D007570 ORTHO05D009365 1.0e-09 70.1 62 53.2
CAN.G665.19 Capsicum annuum HOM05D007570 ORTHO05D009365 3.9e-09 68.2 62 51.6
PGSC0003DMG400024750 Solanum tuberosum HOM05D007570 ORTHO05D009365 6.7e-09 67.4 144 31.9
Ah.10g033640 Amaranthus hybridus HOM05D007570 ORTHO05D009365 1.5e-08 66.2 196 29.1
Rhsim07G0187500 Rhododendron simsii HOM05D001660 ORTHO05D003277 3.3e-08 65.1 244 27.0
Hma1.2p1_1374F.1_g278810 Hydrangea macrophylla HOM05D007570 ORTHO05D009365 7.4e-08 63.9 106 37.7
SalBow3G3428 Salvia bowleyana HOM05D007570 ORTHO05D009365 9.7e-08 63.5 130 33.1
Oeu043366.2 Olea europaea HOM05D007570 ORTHO05D009365 2.8e-07 62.0 116 35.3
MD00G1202400 Malus domestica HOM05D007570 ORTHO05D009365 6.3e-07 60.8 100 36.0
CsaV3_2G035920 Cucumis sativus L. HOM05D021906 ORTHO05D009365 1.1e-06 60.1 70 44.3
FAN03G2441 Fragaria x ananassa HOM05D002709 ORTHO05D002914 1.4e-06 59.7 60 45.0
FAN10G3422 Fragaria x ananassa HOM05D007570 ORTHO05D009365 1.8e-06 59.3 60 45.0
Nn1g08626 Nelumbo nucifera HOM05D007570 ORTHO05D009365 1.8e-06 59.3 64 48.4
MELO3C024749.2 Cucumis melo HOM05D021906 ORTHO05D009365 4.1e-06 58.2 70 42.9
Hund19367 Selenicereus undatus HOM05D007570 ORTHO05D009365 4.1e-06 58.2 145 29.0


User provided reference genes

Program Settings