Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G14710 Arabidopsis thaliana HOM05D006084 ORTHO05D007449 1.8e-63 245.7 125 100.0
AL6G25480 Arabidopsis lyrata HOM05D006084 ORTHO05D007449 1.2e-62 243.0 125 97.6
Carub.0006s1288 Capsella rubella HOM05D006084 ORTHO05D007449 4.5e-62 241.1 125 96.8
Sp6g29330 Schrenkiella parvula HOM05D006084 ORTHO05D007449 1.6e-59 232.6 125 93.6
A03p06720 Brassica napus HOM05D006084 ORTHO05D007449 2.7e-59 231.9 125 92.8
CARHR198600 Cardamine hirsuta HOM05D006084 ORTHO05D007449 2.7e-59 231.9 125 92.8
A02p02680 Brassica napus HOM05D006084 ORTHO05D007449 1.8e-58 229.2 125 92.0
BraA02t05237Z Brassica rapa HOM05D006084 ORTHO05D007449 1.8e-58 229.2 125 92.0
BraA03t10005Z Brassica rapa HOM05D006084 ORTHO05D007449 1.8e-58 229.2 125 92.0
BcaB01g05101 Brassica carinata HOM05D006084 ORTHO05D007449 2.3e-58 228.8 125 92.0
BcaC03g13452 Brassica carinata HOM05D006084 ORTHO05D007449 2.3e-58 228.8 125 92.0
C02p07250 Brassica napus HOM05D006084 ORTHO05D007449 2.3e-58 228.8 125 92.0
C03p07740 Brassica napus HOM05D006084 ORTHO05D007449 2.3e-58 228.8 125 92.0
BolC2t06657H Brassica oleracea HOM05D006084 ORTHO05D007449 2.3e-58 228.8 125 92.0
BolC3t13274H Brassica oleracea HOM05D006084 ORTHO05D007449 2.3e-58 228.8 125 92.0
Thhalv10015025m.g Eutrema salsugineum HOM05D006084 ORTHO05D007449 3.0e-58 228.4 125 91.2
Aa31LG11G14750 Aethionema arabicum HOM05D006084 ORTHO05D007449 1.1e-57 226.5 125 91.2
BcaNung03101 Brassica carinata HOM05D006084 ORTHO05D007449 6.3e-56 220.7 119 92.4
BcaC04g19017 Brassica carinata HOM05D006084 ORTHO05D007449 8.5e-53 210.3 118 89.8
THA.LOC104821076 Tarenaya hassleriana HOM05D006084 ORTHO05D007449 8.5e-53 210.3 125 82.4
C09p62430 Brassica napus HOM05D006084 ORTHO05D007449 4.8e-48 194.5 108 89.8
BolC9t59081H Brassica oleracea HOM05D006084 ORTHO05D007449 1.2e-46 189.9 108 88.0
Haze_14684 Corylus avellana HOM05D006084 ORTHO05D007449 1.7e-45 186.0 124 72.6
Rhsim08G0053800 Rhododendron simsii HOM05D006084 ORTHO05D007449 3.8e-45 184.9 125 72.0
Actinidia35746 Actinidia chinensis HOM05D006084 ORTHO05D007449 5.0e-45 184.5 124 75.0
Dinv33481 Davidia involucrata HOM05D006084 ORTHO05D007449 5.0e-45 184.5 118 75.4
Prupe.3G286100 Prunus persica HOM05D006084 ORTHO05D007449 2.5e-44 182.2 119 73.9
Atru.chr6.2220 Acer truncatum HOM05D006084 ORTHO05D007449 3.2e-44 181.8 125 73.6
Aqoxy3G02941 Aquilegia oxysepala HOM05D006084 ORTHO05D007449 3.2e-44 181.8 124 71.0
Cfa007418 Carpinus fangiana HOM05D006084 ORTHO05D007449 3.2e-44 181.8 125 71.2
Manes.17G116000 Manihot esculenta HOM05D006084 ORTHO05D007449 7.2e-44 180.6 125 72.8
CSS0000489 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 9.4e-44 180.3 125 72.0
CSS0035017 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 9.4e-44 180.3 125 72.0
TAR371G1194 Trochodendron aralioides HOM05D006084 ORTHO05D007449 9.4e-44 180.3 118 73.7
MD17G1033600 Malus domestica HOM05D006084 ORTHO05D007449 1.6e-43 179.5 119 72.3
CiPaw.03G039200 Carya illinoinensis HOM05D006084 ORTHO05D007449 2.7e-43 178.7 125 69.6
QL02p076043 Quercus lobata HOM05D006084 ORTHO05D007449 2.7e-43 178.7 124 67.7
QL02p076078 Quercus lobata HOM05D006084 ORTHO05D007449 2.7e-43 178.7 124 67.7
Gohir.A07G221200 Gossypium hirsutum HOM05D006084 ORTHO05D007449 6.1e-43 177.6 125 68.8
Ca_16579_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 8.0e-43 177.2 123 71.5
Eucgr.I01785 Eucalyptus grandis HOM05D006084 ORTHO05D007449 8.0e-43 177.2 125 68.0
CDE08G0643 Ceratophyllum demersum HOM05D006084 ORTHO05D007449 1.0e-42 176.8 125 66.4
Thecc.04G011100 Theobroma cacao HOM05D006084 ORTHO05D007449 1.0e-42 176.8 125 68.8
RcHm_v2.0_Chr2g0172221 Rosa chinensis HOM05D006084 ORTHO05D007449 1.4e-42 176.4 121 71.1
Medtr3g088470 Medicago truncatula HOM05D006084 ORTHO05D007449 1.8e-42 176.0 123 71.5
Gohir.D07G227900 Gossypium hirsutum HOM05D006084 ORTHO05D007449 2.3e-42 175.6 125 68.8
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 2.3e-42 175.6 118 72.0
FvH4_6g50830 Fragaria vesca HOM05D006084 ORTHO05D007449 4.0e-42 174.9 120 71.7
HanXRQChr07g0198791 Helianthus annuus HOM05D006084 ORTHO05D007449 5.2e-42 174.5 124 70.2
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.2e-41 173.3 120 70.8
FAN14G2625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.2e-41 173.3 120 70.8
ATR0730G058 Amborella trichopoda HOM05D006084 ORTHO05D007449 2.0e-41 172.6 125 68.8
ATR1096G027 Amborella trichopoda HOM05D006084 ORTHO05D007449 3.4e-41 171.8 124 66.9
PSO782G1469 Papaver somniferum HOM05D006084 ORTHO05D007449 3.4e-41 171.8 120 72.5
Potri.001G349500 Populus trichocarpa HOM05D006084 ORTHO05D007449 3.4e-41 171.8 125 67.2
Hund02345 Selenicereus undatus HOM05D006084 ORTHO05D007449 3.4e-41 171.8 125 67.2
GSVIVG01032459001 Vitis vinifera HOM05D006084 ORTHO05D007449 3.4e-41 171.8 119 69.7
CAN.G206.22 Capsicum annuum HOM05D006084 ORTHO05D007449 7.5e-41 170.6 119 68.1
TPR.G13476 Trifolium pratense HOM05D006084 ORTHO05D007449 7.5e-41 170.6 125 68.8
PSO210G7688 Papaver somniferum HOM05D006084 ORTHO05D007449 1.3e-40 169.9 120 69.2
Sed0018290 Sechium edule HOM05D006084 ORTHO05D007449 1.3e-40 169.9 125 67.2
COL.COLO4_28991 Corchorus olitorius HOM05D006084 ORTHO05D007449 1.7e-40 169.5 142 62.7
ECA238G3069 Erigeron canadensis HOM05D006084 ORTHO05D007449 1.7e-40 169.5 124 69.4
PSO566G0352 Papaver somniferum HOM05D006084 ORTHO05D007449 1.7e-40 169.5 119 69.7
Lj1g0023236 Lotus japonicus HOM05D006084 ORTHO05D007449 2.2e-40 169.1 118 71.2
Lalb_Chr10g0093921 Lupinus albus HOM05D006084 ORTHO05D007449 2.2e-40 169.1 118 72.0
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 3.7e-40 168.3 118 70.3
HanXRQChr14g0450361 Helianthus annuus HOM05D006084 ORTHO05D007449 3.7e-40 168.3 119 70.6
TWI12G0619 Tripterygium wilfordii HOM05D006084 ORTHO05D007449 3.7e-40 168.3 125 68.0
HPP92_022049 Vanilla planifolia HOM05D006084 ORTHO05D007449 3.7e-40 168.3 123 65.0
CsaV3_5G027340 Cucumis sativus L. HOM05D006084 ORTHO05D007449 8.3e-40 167.2 125 65.6
CANSAT64G0964 Cannabis sativa HOM05D006084 ORTHO05D007449 4.1e-39 164.9 123 65.9
PGR142G2538 Punica granatum HOM05D006084 ORTHO05D007449 4.1e-39 164.9 113 69.0
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea HOM05D006084 ORTHO05D007449 7.0e-39 164.1 118 71.2
Cc07_g02120 Coffea canephora HOM05D006084 ORTHO05D007449 7.0e-39 164.1 118 67.8
Glyma.04G247000 Glycine max HOM05D006084 ORTHO05D007449 7.0e-39 164.1 124 65.3
Sc03g0007970 Simmondsia chinensis HOM05D006084 ORTHO05D007449 7.0e-39 164.1 125 62.4
MELO3C005689.2 Cucumis melo HOM05D006084 ORTHO05D007449 9.1e-39 163.7 125 64.8
PGSC0003DMG400000490 Solanum tuberosum HOM05D006084 ORTHO05D007449 1.2e-38 163.3 117 66.7
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea HOM05D006084 ORTHO05D007449 2.7e-38 162.2 118 70.3
Migut.H00108 Erythranthe guttata HOM05D006084 ORTHO05D007449 4.5e-38 161.4 120 70.0
Glyma.06G115700 Glycine max HOM05D006084 ORTHO05D007449 4.5e-38 161.4 124 62.9
Phvul.009G127800 Phaseolus vulgaris HOM05D006084 ORTHO05D007449 5.9e-38 161.0 124 64.5
arahy.Tifrunner.gnm1.ann1.48HX9C Arachis hypogaea HOM05D006084 ORTHO05D007449 7.7e-38 160.6 118 69.5
Hma1.2p1_0056F.1_g031653 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 1.7e-37 159.5 105 72.4
MSTRG.3166 Avicennia marina HOM05D006084 ORTHO05D007449 2.3e-37 159.1 120 64.2
Sopen02g031550 Solanum pennellii HOM05D006084 ORTHO05D007449 2.9e-37 158.7 117 65.8
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 8.6e-37 157.1 105 72.4
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.5e-36 156.4 106 72.6
Oeu004718.1 Olea europaea HOM05D006084 ORTHO05D007449 1.5e-36 156.4 120 66.7
ClCG09G019010 Citrullus lanatus HOM05D006084 ORTHO05D007449 9.5e-36 153.7 147 55.8
SGA_v2.0_scaffold2848G54225 Striga asiatica HOM05D006084 ORTHO05D007449 2.8e-35 152.1 120 64.2
Os10g0395500 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 4.7e-35 151.4 127 58.3
Gorai.001G262800 Gossypium raimondii HOM05D006084 ORTHO05D007449 6.1e-35 151.0 107 68.2
Peaxi162Scf00129g01228 Petunia axillaris HOM05D006084 ORTHO05D007449 1.0e-34 150.2 105 69.5
Zm00001eb048120 Zea mays HOM05D006084 ORTHO05D007449 1.4e-34 149.8 119 60.5
unitig_746.g26552 Utricularia gibba HOM05D006084 ORTHO05D007449 1.8e-34 149.4 118 61.9
ClCG00G003490 Citrullus lanatus HOM05D006084 ORTHO05D007449 2.3e-34 149.1 145 55.2
arahy.Tifrunner.gnm1.ann1.GQ5XJ3 Arachis hypogaea HOM05D006084 ORTHO05D007449 3.0e-34 148.7 135 60.7
MBI19_g17406_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 2.0e-33 146.0 130 58.5
EL10Ac3g07214 Beta vulgaris HOM05D006084 ORTHO05D007449 5.7e-33 144.4 113 63.7
Mapoly0005s0179 Marchantia polymorpha HOM05D006084 ORTHO05D007449 1.7e-32 142.9 120 59.2
MBI19_g07248_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 6.3e-32 141.0 132 57.6
SHI16396 Sapria himalayana HOM05D006084 ORTHO05D007449 5.4e-31 137.9 101 65.3
Nn3g16859 Nelumbo nucifera HOM05D006084 ORTHO05D007449 7.0e-31 137.5 118 61.0
Pp3c26_1260 Physcomitrium patens HOM05D006084 ORTHO05D007449 1.2e-30 136.7 127 52.8
Lsat_1_v5_gn_2_91880 Lactuca sativa HOM05D006084 ORTHO05D007449 7.8e-30 134.0 119 60.5
Cpa.g.c30698.2 Carica papaya HOM05D006084 ORTHO05D007449 2.3e-29 132.5 88 75.0
Sabra16G0228900 Salix brachista HOM05D006084 ORTHO05D007449 2.3e-29 132.5 217 39.2
AUR62031990 Chenopodium quinoa HOM05D006084 ORTHO05D007449 2.5e-28 129.0 125 54.4
Duzib264G1216 Durio zibethinus HOM05D006084 ORTHO05D007449 2.5e-28 129.0 89 67.4
BraA10t44460Z Brassica rapa HOM05D006084 ORTHO05D007449 2.3e-26 122.5 90 72.2
Nitab4.5_0007141g0020 Nicotiana tabacum HOM05D006084 ORTHO05D007449 5.2e-26 121.3 106 60.4
Ciclev10017692m.g Citrus clementina HOM05D006084 ORTHO05D007449 2.9e-24 115.5 74 74.3
SMO367G0706 Selaginella moellendorffii HOM05D006084 ORTHO05D007449 3.7e-24 115.2 105 56.2
DCAR_011237 Daucus carota HOM05D006084 ORTHO05D007449 6.4e-24 114.4 113 54.0
Solyc02g086780.4 Solanum lycopersicum HOM05D006084 ORTHO05D007449 4.1e-23 111.7 81 70.4
Ca_03224_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 7.0e-23 110.9 102 56.9
CBR_g5628 Chara braunii HOM05D006084 ORTHO05D007449 6.6e-21 104.4 121 45.5
AUR62030334 Chenopodium quinoa HOM05D006084 ORTHO05D007449 1.5e-20 103.2 74 62.2
Nitab4.5_0006281g0070 Nicotiana tabacum HOM05D006084 ORTHO05D007449 1.2e-19 100.1 74 68.9
Cre13.g571000 Chlamydomonas reinhardtii HOM05D006084 ORTHO05D007449 5.2e-18 94.7 117 40.2
arahy.Tifrunner.gnm1.ann1.2H702Y Arachis hypogaea HOM05D006084 ORTHO05D007449 2.6e-17 92.4 60 73.3
A10p23960 Brassica napus HOM05D006084 ORTHO05D007449 1.7e-16 89.7 131 45.8
AagrBONN_evm.TU.Sc2ySwM_228.3157 Anthoceros agrestis HOM05D006084 ORTHO05D007449 1.1e-15 87.0 81 46.9
MELO3C033557.2 Cucumis melo HOM05D006084 ORTHO05D007449 5.4e-15 84.7 95 50.5
Os01g0339600 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 7.0e-15 84.3 68 60.3
Dinv35076 Davidia involucrata HOM05D006084 ORTHO05D007449 1.5e-12 76.6 45 75.6
SEGI_25092 Sequoiadendron giganteum HOM05D006084 ORTHO05D007449 2.3e-10 69.3 64 45.3
MCO07G269 Micromonas commoda HOM05D006084 ORTHO05D007449 1.6e-06 56.6 93 34.4


User provided reference genes

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