Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G14050 Arabidopsis thaliana HOM05D005019 ORTHO05D006625 0.0e+00 1075.1 547 100.0
AL6G24710 Arabidopsis lyrata HOM05D005019 ORTHO05D006625 1.6e-292 1008.8 547 94.5
Carub.0006s1224 Capsella rubella HOM05D005019 ORTHO05D006625 6.6e-283 976.9 550 92.2
Thhalv10013183m.g Eutrema salsugineum HOM05D005019 ORTHO05D006625 2.2e-270 935.3 548 89.2
CARHR199310 Cardamine hirsuta HOM05D005019 ORTHO05D006625 4.1e-269 931.0 550 88.5
Sp6g29950 Schrenkiella parvula HOM05D005019 ORTHO05D006625 1.1e-261 906.4 548 86.5
Aa31LG11G14850 Aethionema arabicum HOM05D005019 ORTHO05D006625 4.3e-250 867.8 557 82.2
THA.LOC104806394 Tarenaya hassleriana HOM05D005019 ORTHO05D006625 4.1e-208 728.4 501 75.6
Cfa002330 Carpinus fangiana HOM05D005019 ORTHO05D006625 3.8e-198 695.3 564 66.0
Cpa.g.sc200.5 Carica papaya HOM05D005019 ORTHO05D006625 1.9e-197 693.0 502 71.5
Dinv22477 Davidia involucrata HOM05D005019 ORTHO05D006625 7.2e-197 691.0 572 63.6
TWI31G0602 Tripterygium wilfordii HOM05D005019 ORTHO05D006625 1.2e-196 690.3 568 65.8
FvH4_5g20520 Fragaria vesca HOM05D005019 ORTHO05D006625 4.7e-196 688.3 572 65.2
RcHm_v2.0_Chr6g0289431 Rosa chinensis HOM05D005019 ORTHO05D006625 6.1e-196 688.0 571 65.7
FAN20G1740 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.4e-195 686.8 573 64.7
Potri.005G218600 Populus trichocarpa HOM05D005019 ORTHO05D006625 1.8e-195 686.4 538 67.3
GSVIVG01000726001 Vitis vinifera HOM05D005019 ORTHO05D006625 2.3e-195 686.0 559 66.5
Prupe.8G231800 Prunus persica HOM05D005019 ORTHO05D006625 3.0e-195 685.6 576 64.8
FvH4_2g22480 Fragaria vesca HOM05D005019 ORTHO05D006625 6.7e-195 684.5 548 67.0
FAN18G2643 Fragaria x ananassa HOM05D005019 ORTHO05D006625 8.8e-195 684.1 571 64.8
FAN24G1214 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.5e-194 683.3 564 65.6
FAN27G0650 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.3e-193 680.2 573 64.4
Cc02_g22310 Coffea canephora HOM05D005019 ORTHO05D006625 3.7e-193 678.7 564 65.2
Actinidia21157 Actinidia chinensis HOM05D005019 ORTHO05D006625 6.3e-193 677.9 572 63.8
Prupe.5G054300 Prunus persica HOM05D005019 ORTHO05D006625 6.3e-193 677.9 573 63.5
PGR044G0331 Punica granatum HOM05D005019 ORTHO05D006625 1.1e-192 677.2 568 65.5
FAN15G0975 Fragaria x ananassa HOM05D005019 ORTHO05D006625 2.4e-192 676.0 573 64.7
Lalb_Chr19g0134621 Lupinus albus HOM05D005019 ORTHO05D006625 3.1e-192 675.6 543 65.4
arahy.Tifrunner.gnm1.ann1.TZR8AU Arachis hypogaea HOM05D005019 ORTHO05D006625 9.1e-192 674.1 501 68.7
Lj1P543T22 Lonicera japonica HOM05D005019 ORTHO05D006625 9.1e-192 674.1 493 68.8
CiPaw.03G257900 Carya illinoinensis HOM05D005019 ORTHO05D006625 1.2e-191 673.7 574 62.9
Psat1g046760 Pisum sativum HOM05D005019 ORTHO05D006625 2.0e-191 672.9 564 64.2
FAN04G2884 Fragaria x ananassa HOM05D005019 ORTHO05D006625 2.7e-191 672.5 572 64.0
Haze_24536 Corylus avellana HOM05D005019 ORTHO05D006625 4.5e-191 671.8 551 65.9
Dinv34572 Davidia involucrata HOM05D005019 ORTHO05D006625 4.5e-191 671.8 571 64.1
Glyma.13G255400 Glycine max HOM05D005019 ORTHO05D006625 7.7e-191 671.0 563 63.8
CANSAT35G0193 Cannabis sativa HOM05D005019 ORTHO05D006625 1.3e-190 670.2 504 69.0
Ca_00175_v3 Cicer arietinum L. HOM05D005019 ORTHO05D006625 1.7e-190 669.8 563 63.6
Lalb_Chr03g0030271 Lupinus albus HOM05D005019 ORTHO05D006625 3.8e-190 668.7 544 64.5
Lj1C59T1 Lonicera japonica HOM05D005019 ORTHO05D006625 5.0e-190 668.3 567 63.7
Glyma.15G059400 Glycine max HOM05D005019 ORTHO05D006625 6.5e-190 667.9 563 62.3
Manes.16G024300 Manihot esculenta HOM05D005019 ORTHO05D006625 6.5e-190 667.9 563 65.5
Thecc.01G159500 Theobroma cacao HOM05D005019 ORTHO05D006625 1.5e-189 666.8 572 64.0
Sc04g0003030 Simmondsia chinensis HOM05D005019 ORTHO05D006625 2.5e-189 666.0 505 67.5
Sabra05G0167700 Salix brachista HOM05D005019 ORTHO05D006625 5.5e-189 664.8 526 66.3
Ciclev10019516m.g Citrus clementina HOM05D005019 ORTHO05D006625 7.2e-189 664.5 573 62.5
Duzib147G1145 Durio zibethinus HOM05D005019 ORTHO05D006625 1.2e-188 663.7 565 64.1
Sed0015889 Sechium edule HOM05D005019 ORTHO05D006625 1.6e-188 663.3 511 67.7
Gohir.D11G348100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 2.1e-188 662.9 573 62.7
ClCG02G012250 Citrullus lanatus HOM05D005019 ORTHO05D006625 2.7e-188 662.5 547 64.7
MD10G1192400 Malus domestica HOM05D005019 ORTHO05D006625 2.7e-188 662.5 572 62.1
Nitab4.5_0008299g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 3.6e-188 662.1 508 67.9
Medtr2g009800 Medicago truncatula HOM05D005019 ORTHO05D006625 4.7e-188 661.8 563 62.3
Nitab4.5_0010414g0010 Nicotiana tabacum HOM05D005019 ORTHO05D006625 8.0e-188 661.0 508 67.9
Gorai.007G378500 Gossypium raimondii HOM05D005019 ORTHO05D006625 2.3e-187 659.4 573 62.7
Gorai.012G016900 Gossypium raimondii HOM05D005019 ORTHO05D006625 3.0e-187 659.1 567 62.6
TAR633G0331 Trochodendron aralioides HOM05D005019 ORTHO05D006625 4.0e-187 658.7 559 63.5
Gohir.D04G014300 Gossypium hirsutum HOM05D005019 ORTHO05D006625 6.8e-187 657.9 567 62.4
Phvul.006G200700 Phaseolus vulgaris HOM05D005019 ORTHO05D006625 1.2e-186 657.1 551 63.5
Psat1g214520 Pisum sativum HOM05D005019 ORTHO05D006625 1.2e-186 657.1 565 62.1
Rhsim07G0080400 Rhododendron simsii HOM05D005019 ORTHO05D006625 1.2e-186 657.1 576 62.7
Lj1g0019097 Lotus japonicus HOM05D005019 ORTHO05D006625 2.0e-186 656.4 563 62.9
PSO210G0391 Papaver somniferum HOM05D005019 ORTHO05D006625 3.4e-186 655.6 554 63.7
PGSC0003DMG400023686 Solanum tuberosum HOM05D005019 ORTHO05D006625 3.4e-186 655.6 564 62.4
CsaV3_2G016400 Cucumis sativus L. HOM05D005019 ORTHO05D006625 1.3e-185 653.7 546 64.3
Sopen10g030790 Solanum pennellii HOM05D005019 ORTHO05D006625 1.3e-185 653.7 515 65.6
MELO3C020849.2 Cucumis melo HOM05D005019 ORTHO05D006625 1.7e-185 653.3 545 63.1
Eucgr.K03309 Eucalyptus grandis HOM05D005019 ORTHO05D006625 2.2e-185 652.9 571 61.3
MD05G1205400 Malus domestica HOM05D005019 ORTHO05D006625 2.2e-185 652.9 574 61.8
Gohir.A11G329100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 3.7e-185 652.1 572 61.9
PSO210G5187 Papaver somniferum HOM05D005019 ORTHO05D006625 3.7e-185 652.1 554 63.7
Solyc10g080180.3 Solanum lycopersicum HOM05D005019 ORTHO05D006625 3.7e-185 652.1 507 66.1
Medtr2g101620 Medicago truncatula HOM05D005019 ORTHO05D006625 4.8e-185 651.7 564 61.5
VMungo0540G2473 Vigna mungo HOM05D005019 ORTHO05D006625 4.8e-185 651.7 550 62.5
Nitab4.5_0003006g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 1.4e-184 650.2 508 66.7
TPR.G9511 Trifolium pratense HOM05D005019 ORTHO05D006625 1.4e-184 650.2 561 62.0
Peaxi162Scf00045g00177 Petunia axillaris HOM05D005019 ORTHO05D006625 7.0e-184 647.9 566 61.8
Nitab4.5_0001370g0040 Nicotiana tabacum HOM05D005019 ORTHO05D006625 4.5e-183 645.2 507 65.7
Migut.N02183 Erythranthe guttata HOM05D005019 ORTHO05D006625 6.5e-182 641.3 571 60.1
ECA247G2036 Erigeron canadensis HOM05D005019 ORTHO05D006625 8.5e-182 641.0 555 61.4
DCAR_002684 Daucus carota HOM05D005019 ORTHO05D006625 1.9e-181 639.8 568 60.4
SalBow6G4122 Salvia bowleyana HOM05D005019 ORTHO05D006625 1.9e-181 639.8 547 62.7
HanXRQChr14g0454081 Helianthus annuus HOM05D005019 ORTHO05D006625 2.5e-181 639.4 556 60.8
Nn7g37931 Nelumbo nucifera HOM05D005019 ORTHO05D006625 2.5e-181 639.4 494 67.0
Ah.02g113910 Amaranthus hybridus HOM05D005019 ORTHO05D006625 1.6e-180 636.7 579 60.3
ClCG07G000610 Citrullus lanatus HOM05D005019 ORTHO05D006625 8.0e-180 634.4 532 63.5
Lsat_1_v5_gn_8_3120 Lactuca sativa HOM05D005019 ORTHO05D006625 4.0e-179 632.1 556 60.8
GSVIVG01003806001 Vitis vinifera HOM05D005019 ORTHO05D006625 4.0e-179 632.1 562 61.9
AUR62037688 Chenopodium quinoa HOM05D005019 ORTHO05D006625 6.8e-179 631.3 564 60.5
AUR62008493 Chenopodium quinoa HOM05D005019 ORTHO05D006625 8.8e-179 630.9 563 61.1
EL10Ac5g11096 Beta vulgaris HOM05D005019 ORTHO05D006625 2.0e-178 629.8 547 61.4
Atru.chr5.1578 Acer truncatum HOM05D005019 ORTHO05D006625 2.6e-178 629.4 568 60.6
Lsat_1_v5_gn_9_9921 Lactuca sativa HOM05D005019 ORTHO05D006625 5.7e-178 628.2 561 61.1
RcHm_v2.0_Chr7g0205871 Rosa chinensis HOM05D005019 ORTHO05D006625 4.9e-177 625.2 429 74.1
SalBow3G3235 Salvia bowleyana HOM05D005019 ORTHO05D006625 4.9e-177 625.2 578 60.6
Oeu018172.1 Olea europaea HOM05D005019 ORTHO05D006625 4.3e-173 612.1 543 59.9
SGA_v2.0_scaffold80G25914 Striga asiatica HOM05D005019 ORTHO05D006625 2.1e-172 609.8 519 62.4
Aqoxy5G00344 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 6.1e-172 608.2 501 62.9
MSTRG.12540 Avicennia marina HOM05D005019 ORTHO05D006625 2.3e-171 606.3 574 56.8
Gohir.A05G401500 Gossypium hirsutum HOM05D005019 ORTHO05D006625 6.8e-171 604.7 567 59.4
Aqoxy6G01670 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 2.0e-170 603.2 580 57.2
Os07g0603200 Oryza sativa ssp. japonica HOM05D005019 ORTHO05D006625 6.4e-169 598.2 498 62.2
MBI12_g17287_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 1.1e-168 597.4 564 58.7
HPP92_026109 Vanilla planifolia HOM05D005019 ORTHO05D006625 9.2e-168 594.3 560 57.3
Zm00001eb227850 Zea mays HOM05D005019 ORTHO05D006625 1.2e-167 594.0 566 56.5
AUR62021601 Chenopodium quinoa HOM05D005019 ORTHO05D006625 2.0e-167 593.2 556 58.6
Hund02608 Selenicereus undatus HOM05D005019 ORTHO05D006625 4.6e-167 592.0 538 59.1
Lj6g0023367 Lotus japonicus HOM05D005019 ORTHO05D006625 1.0e-166 590.9 545 60.0
AUR62025557 Chenopodium quinoa HOM05D005019 ORTHO05D006625 3.3e-165 585.9 540 59.6
ATR0564G197 Amborella trichopoda HOM05D005019 ORTHO05D006625 5.6e-165 585.1 565 55.9
CSS0021329 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 5.2e-163 578.6 559 57.8
vmacro14869 Vaccinium macrocarpon HOM05D005019 ORTHO05D006625 5.8e-162 575.1 567 56.1
SHI13722 Sapria himalayana HOM05D005019 ORTHO05D006625 1.4e-160 570.5 496 59.9
unitig_8.g4702 Utricularia gibba HOM05D005019 ORTHO05D006625 3.0e-158 562.8 572 55.1
Thecc.05G016300 Theobroma cacao HOM05D005019 ORTHO05D006625 5.0e-158 562.0 425 68.5
Hma1.2p1_1029F.1_g249600 Hydrangea macrophylla HOM05D005019 ORTHO05D006625 4.6e-151 538.9 343 76.4
CDE04G3201 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 1.6e-148 530.4 448 59.8
SEGI_19346 Sequoiadendron giganteum HOM05D005019 ORTHO05D006625 2.2e-145 520.0 550 53.1
HPP92_022900 Vanilla planifolia HOM05D005019 ORTHO05D006625 7.3e-141 505.0 383 65.3
Ciclev10006829m.g Citrus clementina HOM05D005019 ORTHO05D006625 1.3e-137 494.2 510 57.3
AagrBONN_evm.TU.Sc2ySwM_362.2571 Anthoceros agrestis HOM05D005019 ORTHO05D006625 6.4e-129 465.3 520 48.3
Mapoly0051s0055 Marchantia polymorpha HOM05D005019 ORTHO05D006625 8.7e-126 454.9 517 47.4
SMO356G0724 Selaginella moellendorffii HOM05D005019 ORTHO05D006625 2.3e-118 430.3 518 48.3
CDE02G2819 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 5.1e-118 429.1 471 51.8
CBR_g21842 Chara braunii HOM05D005019 ORTHO05D006625 1.2e-114 417.9 531 42.4
Rhsim01G0269300 Rhododendron simsii HOM05D005019 ORTHO05D006625 1.1e-112 411.4 258 75.6
Pp3c26_4890 Physcomitrium patens HOM05D005019 ORTHO05D006625 2.7e-103 380.2 473 43.6
QL02p075842 Quercus lobata HOM05D005019 ORTHO05D006625 3.0e-102 376.7 550 44.7
Actinidia24938 Actinidia chinensis HOM05D005019 ORTHO05D006625 2.4e-91 340.5 462 47.4
CSS0011909 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 1.9e-88 330.9 507 41.6
Cre06.g255950 Chlamydomonas reinhardtii HOM05D005019 ORTHO05D006625 7.2e-88 328.9 467 39.8
AagrBONN_evm.TU.Sc2ySwM_228.5554 Anthoceros agrestis HOM05D005019 ORTHO05D006625 3.6e-87 326.6 301 54.5
MBI17_g40264_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 1.0e-86 325.1 288 62.8
AUR62008687 Chenopodium quinoa HOM05D005019 ORTHO05D006625 1.4e-86 324.7 512 42.0
BcaNung06034 Brassica carinata HOM05D005019 ORTHO05D006625 3.7e-84 316.6 244 69.7
MBI17_g13392_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D012924 1.0e-73 282.0 369 47.4
MCO01G264 Micromonas commoda HOM05D005019 ORTHO05D006625 8.0e-71 272.3 444 37.4
PRCOL_00000196 Prasinoderma coloniale HOM05D005019 ORTHO05D006625 4.8e-68 263.1 322 41.3
BcaB01g06348 Brassica carinata HOM05D005019 ORTHO05D006625 2.5e-48 197.6 231 52.4
TAR383G0651 Trochodendron aralioides HOM05D005019 ORTHO05D006625 2.2e-44 184.5 560 31.6
MD05G1205300 Malus domestica HOM05D005019 ORTHO05D048639 3.4e-29 134.0 151 55.0
Cfa024923 Carpinus fangiana HOM05D005019 ORTHO05D126389 4.6e-26 123.6 596 22.1
QL02p076237 Quercus lobata HOM05D005019 ORTHO05D006625 1.1e-16 92.4 92 60.9
Zm00001eb227870 Zea mays HOM05D005019 ORTHO05D048639 6.4e-12 76.6 80 51.2
BcaC09g48007 Brassica carinata HOM05D007125 ORTHO05D008766 3.1e-06 57.8 169 28.4
Sp3g07530 Schrenkiella parvula HOM05D007125 ORTHO05D008766 6.9e-06 56.6 206 25.7


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