Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G13310 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 6.0e-203 710.7 371 100.0
AL6G23930 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 1.4e-167 593.2 385 84.4
Carub.0006s1148 Capsella rubella HOM05D003379 ORTHO05D003862 4.2e-148 528.5 391 76.0
CARHR200130 Cardamine hirsuta HOM05D003379 ORTHO05D003862 2.0e-142 509.6 390 73.1
Thhalv10013755m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 4.2e-124 448.7 400 67.2
Sp6g30680 Schrenkiella parvula HOM05D003379 ORTHO05D003862 6.1e-123 444.9 393 66.7
BcaC04g19123 Brassica carinata HOM05D003379 ORTHO05D003862 4.1e-119 432.2 387 65.6
BraA10t44552Z Brassica rapa HOM05D003379 ORTHO05D003862 4.2e-108 395.6 387 62.8
C09p63750 Brassica napus HOM05D003379 ORTHO05D003862 4.3e-100 369.0 337 64.1
A10p24890 Brassica napus HOM05D003379 ORTHO05D003862 4.7e-99 365.5 342 63.7
Aa31LG3G14350 Aethionema arabicum HOM05D003379 ORTHO05D003862 6.2e-91 338.6 417 54.2
THA.LOC104825281 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 3.5e-78 296.2 445 48.5
THA.LOC104825464 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 5.6e-68 262.3 431 47.6
QL03p049546 Quercus lobata HOM05D003379 ORTHO05D003862 1.4e-50 204.5 446 37.2
Haze_12496 Corylus avellana HOM05D003379 ORTHO05D003862 1.3e-48 198.0 445 37.5
CiPaw.06G109000 Carya illinoinensis HOM05D003379 ORTHO05D003862 1.8e-45 187.6 452 37.2
Atru.chr12.1405 Acer truncatum HOM05D003379 ORTHO05D003862 1.1e-44 184.9 448 38.2
BcaNung03374 Brassica carinata HOM05D003379 ORTHO05D003862 7.4e-44 182.2 178 62.4
Manes.08G101800 Manihot esculenta HOM05D003379 ORTHO05D003862 9.6e-44 181.8 448 37.1
Dinv01473 Davidia involucrata HOM05D003379 ORTHO05D003862 8.1e-43 178.7 445 37.1
Potri.003G163100 Populus trichocarpa HOM05D003379 ORTHO05D003862 8.1e-43 178.7 439 36.7
Dinv19304 Davidia involucrata HOM05D003379 ORTHO05D003862 1.4e-42 177.9 463 37.6
Cfa009444 Carpinus fangiana HOM05D003379 ORTHO05D003862 1.8e-42 177.6 373 38.3
Sabra03G0118600 Salix brachista HOM05D003379 ORTHO05D003862 3.4e-41 173.3 439 36.2
Ciclev10005064m.g Citrus clementina HOM05D003379 ORTHO05D003862 2.2e-40 170.6 429 35.9
EL10Ac8g20553 Beta vulgaris HOM05D003379 ORTHO05D003862 2.5e-39 167.2 436 35.3
COL.COLO4_21771 Corchorus olitorius HOM05D003379 ORTHO05D003862 2.5e-39 167.2 440 35.5
TAR475G0001 Trochodendron aralioides HOM05D003379 ORTHO05D003862 4.2e-39 166.4 450 34.4
Ah.09g236390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 6.0e-38 162.5 444 34.9
BcaC04g20129 Brassica carinata HOM05D003379 ORTHO05D003862 6.0e-38 162.5 178 59.0
Prupe.1G216200 Prunus persica HOM05D003379 ORTHO05D003862 7.9e-38 162.2 421 35.6
BolC7t42848H Brassica oleracea HOM05D003379 ORTHO05D003862 1.3e-37 161.4 193 53.4
TWI75G1860 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 3.0e-37 160.2 444 34.2
C09p44800 Brassica napus HOM05D003379 ORTHO05D003862 5.1e-37 159.5 228 47.8
Duzib132G1102 Durio zibethinus HOM05D003379 ORTHO05D003862 6.7e-37 159.1 442 35.1
Peaxi162Scf00171g00621 Petunia axillaris HOM05D003379 ORTHO05D003862 8.7e-37 158.7 417 34.5
Gorai.005G196800 Gossypium raimondii HOM05D003379 ORTHO05D003862 2.8e-35 153.7 443 34.8
CSS0045312 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 1.4e-34 151.4 375 36.3
RcHm_v2.0_Chr4g0428951 Rosa chinensis HOM05D003379 ORTHO05D003862 3.1e-34 150.2 409 35.9
C07p23110 Brassica napus HOM05D003379 ORTHO05D003862 5.3e-34 149.4 228 46.9
Manes.09G187602 Manihot esculenta HOM05D003379 ORTHO05D003862 5.3e-34 149.4 426 31.9
CAN.G7.8 Capsicum annuum HOM05D003379 ORTHO05D003862 1.2e-33 148.3 422 34.6
Gohir.D02G175200 Gossypium hirsutum HOM05D003379 ORTHO05D003862 1.2e-33 148.3 441 34.2
PGSC0003DMG400004243 Solanum tuberosum HOM05D003379 ORTHO05D003862 1.5e-33 147.9 418 34.0
Hma1.2p1_0787F.1_g217850 Hydrangea macrophylla HOM05D003379 ORTHO05D003862 2.6e-33 147.1 466 33.9
Hund23589 Selenicereus undatus HOM05D003379 ORTHO05D003862 2.6e-33 147.1 470 33.4
MBI07_g41898_MAGBIO Magnolia biondii HOM05D003379 ORTHO05D003862 3.4e-33 146.7 457 31.3
Sopen04g017060 Solanum pennellii HOM05D003379 ORTHO05D003862 7.6e-33 145.6 415 33.7
Thecc.02G193300 Theobroma cacao HOM05D003379 ORTHO05D003862 7.6e-33 145.6 444 33.8
PGR142G1656 Punica granatum HOM05D003379 ORTHO05D003862 1.3e-32 144.8 444 32.4
TAR374G0325 Trochodendron aralioides HOM05D003379 ORTHO05D003862 1.3e-32 144.8 458 31.7
Rhsim12G0017700 Rhododendron simsii HOM05D003379 ORTHO05D003862 2.2e-32 144.1 453 32.7
Sc17g0006750 Simmondsia chinensis HOM05D003379 ORTHO05D003862 5.0e-32 142.9 440 32.5
Actinidia30590 Actinidia chinensis HOM05D003379 ORTHO05D003862 6.5e-32 142.5 443 33.6
Solyc04g024520.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 8.5e-32 142.1 415 33.0
FvH4_4g22730 Fragaria vesca HOM05D003379 ORTHO05D003862 5.5e-31 139.4 406 34.2
AUR62014693 Chenopodium quinoa HOM05D003379 ORTHO05D003862 1.2e-30 138.3 414 33.8
CDE05G0540 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 2.1e-30 137.5 423 32.6
BolC9t59151H Brassica oleracea HOM05D003379 ORTHO05D003862 3.6e-30 136.7 410 33.4
TWI36G1473 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 3.6e-30 136.7 445 33.9
Actinidia22119 Actinidia chinensis HOM05D003379 ORTHO05D003862 1.0e-29 135.2 442 32.8
Nitab4.5_0005424g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 1.0e-29 135.2 295 37.6
Cfa007165 Carpinus fangiana HOM05D003379 ORTHO05D003862 1.3e-29 134.8 457 32.6
FAN12G1414 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.8e-29 134.4 406 33.7
Nn4g22138 Nelumbo nucifera HOM05D003379 ORTHO05D003862 1.8e-29 134.4 407 32.7
CiPaw.04G001500 Carya illinoinensis HOM05D003379 ORTHO05D003862 2.3e-29 134.0 428 31.1
Sed0002814 Sechium edule HOM05D003379 ORTHO05D003862 2.3e-29 134.0 441 31.7
C09p63160 Brassica napus HOM05D003379 ORTHO05D003862 3.0e-29 133.7 422 33.6
FAN07G0868 Fragaria x ananassa HOM05D003379 ORTHO05D003862 3.0e-29 133.7 410 33.4
Gohir.A03G152100 Gossypium hirsutum HOM05D003379 ORTHO05D003862 3.9e-29 133.3 382 34.6
Rhsim08G0039200 Rhododendron simsii HOM05D003379 ORTHO05D003862 5.1e-29 132.9 457 31.1
Lj7A617T72 Lonicera japonica HOM05D003379 ORTHO05D003862 6.7e-29 132.5 441 31.5
C01p04570 Brassica napus HOM05D003379 ORTHO05D003862 1.5e-28 131.3 202 44.6
C09p09610 Brassica napus HOM05D003379 ORTHO05D003862 1.5e-28 131.3 121 64.5
FAN17G1075 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.9e-28 131.0 410 33.7
MD09G1002700 Malus domestica HOM05D003379 ORTHO05D003862 1.9e-28 131.0 443 30.2
MELO3C014781.2 Cucumis melo HOM05D003379 ORTHO05D003862 3.3e-28 130.2 443 32.5
vmacro18379 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 3.3e-28 130.2 460 31.5
ATR0582G197 Amborella trichopoda HOM05D003379 ORTHO05D003862 5.7e-28 129.4 439 32.8
A10p24430 Brassica napus HOM05D003379 ORTHO05D003862 7.4e-28 129.0 421 32.5
Atru.chr6.2693 Acer truncatum HOM05D003379 ORTHO05D003862 9.7e-28 128.6 427 31.9
BraA10t44509Z Brassica rapa HOM05D003379 ORTHO05D003862 1.3e-27 128.3 420 32.6
Nitab4.5_0002116g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 1.3e-27 128.3 423 30.7
C08p33300 Brassica napus HOM05D003379 ORTHO05D003862 1.6e-27 127.9 118 62.7
Duzib187G1855 Durio zibethinus HOM05D003379 ORTHO05D003862 1.6e-27 127.9 454 31.3
Manes.11G076800 Manihot esculenta HOM05D003379 ORTHO05D003862 1.6e-27 127.9 453 31.6
Sp6g30030 Schrenkiella parvula HOM05D003379 ORTHO05D003862 2.2e-27 127.5 415 34.0
CDE05G1535 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 3.7e-27 126.7 423 31.4
Cpa.g.sc70.68 Carica papaya HOM05D003379 ORTHO05D003862 6.3e-27 125.9 450 31.6
Gohir.A07G232700 Gossypium hirsutum HOM05D003379 ORTHO05D003862 6.3e-27 125.9 449 31.6
MD13G1129900 Malus domestica HOM05D003379 ORTHO05D003862 1.4e-26 124.8 408 30.9
AT5G13970 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 1.8e-26 124.4 421 32.1
Duzib147G0361 Durio zibethinus HOM05D003379 ORTHO05D003862 1.8e-26 124.4 385 33.2
COL.COLO4_13374 Corchorus olitorius HOM05D003379 ORTHO05D003862 2.4e-26 124.0 458 30.8
Aqoxy6G00186 Aquilegia oxysepala HOM05D003379 ORTHO05D003862 3.1e-26 123.6 435 30.3
Gohir.D07G239900 Gossypium hirsutum HOM05D003379 ORTHO05D003862 3.1e-26 123.6 450 31.3
MD17G1006900 Malus domestica HOM05D003379 ORTHO05D003862 3.1e-26 123.6 440 30.2
QL02p069539 Quercus lobata HOM05D003379 ORTHO05D003862 3.1e-26 123.6 448 30.1
Thecc.04G047800 Theobroma cacao HOM05D003379 ORTHO05D003862 4.1e-26 123.2 464 31.7
AL6G24630 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 5.3e-26 122.9 420 33.3
Thhalv10013725m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 5.3e-26 122.9 420 33.1
Haze_14949 Corylus avellana HOM05D003379 ORTHO05D003862 6.9e-26 122.5 456 30.5
Dinv25618 Davidia involucrata HOM05D003379 ORTHO05D003862 6.9e-26 122.5 464 31.9
Gorai.001G276100 Gossypium raimondii HOM05D003379 ORTHO05D003862 9.1e-26 122.1 449 31.6
Potri.002G238100 Populus trichocarpa HOM05D003379 ORTHO05D003862 9.1e-26 122.1 445 31.0
Actinidia36245 Actinidia chinensis HOM05D003379 ORTHO05D003862 1.5e-25 121.3 438 30.6
Sabra02G0181500 Salix brachista HOM05D003379 ORTHO05D003862 1.5e-25 121.3 444 31.1
SGA_v2.0_scaffold306G48013 Striga asiatica HOM05D003379 ORTHO05D003862 2.0e-25 120.9 460 30.4
ClCG05G012630 Citrullus lanatus HOM05D003379 ORTHO05D003862 2.6e-25 120.6 441 31.7
Ciclev10015333m.g Citrus clementina HOM05D003379 ORTHO05D003862 2.6e-25 120.6 444 31.8
CsaV3_3G027780 Cucumis sativus L. HOM05D003379 ORTHO05D003862 2.6e-25 120.6 441 31.1
Carub.0006s1216 Capsella rubella HOM05D003379 ORTHO05D003862 3.4e-25 120.2 420 31.9
FAN09G0861 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.7e-24 117.9 431 30.4
FAN14G1380 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.4e-23 114.8 430 30.2
DCAR_002970 Daucus carota HOM05D003379 ORTHO05D003862 1.9e-23 114.4 436 30.5
TWI32G0366 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 1.9e-23 114.4 442 30.1
MSTRG.2062 Avicennia marina HOM05D003379 ORTHO05D003862 5.5e-23 112.8 449 29.0
Potri.014G143800 Populus trichocarpa HOM05D003379 ORTHO05D003862 5.5e-23 112.8 440 30.2
FvH4_6g54290 Fragaria vesca HOM05D003379 ORTHO05D003862 7.2e-23 112.5 434 30.0
FAN05G5138 Fragaria x ananassa HOM05D003379 ORTHO05D003862 9.4e-23 112.1 429 29.4
Sed0021165 Sechium edule HOM05D003379 ORTHO05D003862 1.2e-22 111.7 449 31.4
Migut.E00693 Erythranthe guttata HOM05D003379 ORTHO05D003862 2.7e-22 110.5 449 29.4
HanXRQChr12g0384731 Helianthus annuus HOM05D003379 ORTHO05D003862 2.7e-22 110.5 384 31.5
GSVIVG01001080001 Vitis vinifera HOM05D003379 ORTHO05D003862 7.9e-22 109.0 414 31.9
VMungo1383G3656 Vigna mungo HOM05D003379 ORTHO05D003862 1.0e-21 108.6 419 29.4
Sc03g0005220 Simmondsia chinensis HOM05D003379 ORTHO05D003862 1.4e-21 108.2 417 31.2
Aa31LG11G15410 Aethionema arabicum HOM05D003379 ORTHO05D003862 2.3e-21 107.5 438 29.9
Cc07_g01280 Coffea canephora HOM05D003379 ORTHO05D003862 2.3e-21 107.5 483 28.0
Medtr7g084070 Medicago truncatula HOM05D003379 ORTHO05D003862 2.3e-21 107.5 367 30.8
Ca_08145_v3 Cicer arietinum L. HOM05D003379 ORTHO05D003862 3.0e-21 107.1 426 29.8
C09p11640 Brassica napus HOM05D003379 ORTHO05D003862 5.1e-21 106.3 177 42.9
Phvul.001G084300 Phaseolus vulgaris HOM05D003379 ORTHO05D003862 6.7e-21 105.9 394 30.5
ECA234G2936 Erigeron canadensis HOM05D003379 ORTHO05D003862 8.8e-21 105.5 383 31.9
CANSAT64G2275 Cannabis sativa HOM05D003379 ORTHO05D003862 1.1e-20 105.1 432 29.2
Prupe.3G313500 Prunus persica HOM05D003379 ORTHO05D003862 1.1e-20 105.1 446 29.1
Glyma.19G103400 Glycine max HOM05D003379 ORTHO05D003862 1.7e-19 101.3 328 33.5
CSS0041611 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 2.2e-19 100.9 459 28.8
Lsat_1_v5_gn_0_41321 Lactuca sativa HOM05D003379 ORTHO05D003862 6.3e-19 99.4 428 29.0
PSO017G0829 Papaver somniferum HOM05D003379 ORTHO05D003862 6.3e-19 99.4 458 29.5
HPP92_027984 Vanilla planifolia HOM05D003379 ORTHO05D003862 1.1e-18 98.6 322 30.4
Lalb_Chr14g0364121 Lupinus albus HOM05D003379 ORTHO05D003862 1.4e-18 98.2 443 29.6
Eucgr.I02446 Eucalyptus grandis HOM05D003379 ORTHO05D003862 2.4e-18 97.4 412 28.6
Lsat_1_v5_gn_4_1521 Lactuca sativa HOM05D003379 ORTHO05D003862 4.1e-18 96.7 295 34.6
BolC9t57591H Brassica oleracea HOM05D013459 ORTHO05D018689 1.2e-17 95.1 174 40.8
EL10Ac6g13403 Beta vulgaris HOM05D003379 ORTHO05D003862 2.0e-17 94.4 495 26.7
AUR62017428 Chenopodium quinoa HOM05D003379 ORTHO05D003862 4.5e-17 93.2 333 30.9
Psat3g093320 Pisum sativum HOM05D003379 ORTHO05D003862 5.9e-17 92.8 422 27.7
Nitab4.5_0007209g0030 Nicotiana tabacum HOM05D000225 ORTHO05D001595 1.7e-16 91.3 348 29.3
Glyma.16G047900 Glycine max HOM05D003379 ORTHO05D003862 6.5e-16 89.4 433 27.0
PSO478G4908 Papaver somniferum HOM05D003379 ORTHO05D003862 6.5e-16 89.4 458 28.4
SalBow6G5409 Salvia bowleyana HOM05D003379 ORTHO05D003862 6.5e-16 89.4 311 30.2
Hund04187 Selenicereus undatus HOM05D003379 ORTHO05D003862 6.5e-16 89.4 470 27.4
Sopen02g036510 Solanum pennellii HOM05D003379 ORTHO05D003862 6.5e-16 89.4 413 27.1
AUR62012502 Chenopodium quinoa HOM05D003379 ORTHO05D003862 8.5e-16 89.0 296 31.4
AUR62037825 Chenopodium quinoa HOM05D003379 ORTHO05D003862 2.5e-15 87.4 332 30.7
Lj1g0011786 Lotus japonicus HOM05D003379 ORTHO05D003862 4.2e-15 86.7 339 29.2
Solyc02g091940.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 4.2e-15 86.7 413 26.9
Nitab4.5_0001409g0240 Nicotiana tabacum HOM05D000225 ORTHO05D001595 9.4e-15 85.5 418 26.1
Zm00001eb084870 Zea mays HOM05D003379 ORTHO05D003862 2.1e-14 84.3 459 26.4
arahy.Tifrunner.gnm1.ann1.JRYW6U Arachis hypogaea HOM05D003379 ORTHO05D003862 2.7e-14 84.0 457 27.1
arahy.Tifrunner.gnm1.ann1.M1DIX9 Arachis hypogaea HOM05D003379 ORTHO05D003862 2.7e-14 84.0 456 27.9
CSS0018885 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 1.0e-13 82.0 251 32.3
BcaC09g48308 Brassica carinata HOM05D003379 ORTHO05D003862 1.8e-13 81.3 67 67.2
CARHR199420 Cardamine hirsuta HOM05D003379 ORTHO05D003862 3.0e-13 80.5 261 33.3
PGSC0003DMG400021424 Solanum tuberosum HOM05D003379 ORTHO05D003862 3.0e-13 80.5 418 25.8
Ah.03g136390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 8.8e-13 79.0 256 33.6
Lj6P837T11 Lonicera japonica HOM05D003379 ORTHO05D003862 8.8e-13 79.0 140 42.1
Oeu027918.1 Olea europaea HOM05D003379 ORTHO05D003862 1.1e-12 78.6 402 28.1
Zm00001eb421370 Zea mays HOM05D003379 ORTHO05D003862 1.1e-12 78.6 452 25.7
unitig_22.g5626 Utricularia gibba HOM05D003379 ORTHO05D003862 9.7e-12 75.5 392 27.8
HanXRQChr17g0550921 Helianthus annuus HOM05D003379 ORTHO05D003862 1.7e-11 74.7 413 25.7
Lalb_Chr22g0359971 Lupinus albus HOM05D003379 ORTHO05D003862 8.2e-11 72.4 254 30.3
CAN.G1061.1 Capsicum annuum HOM05D003379 ORTHO05D003862 1.8e-10 71.2 412 24.5
vmacro01023 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 7.0e-10 69.3 450 26.0
HPP92_006450 Vanilla planifolia HOM05D003379 ORTHO05D003862 9.1e-10 68.9 246 30.1
C09p60140 Brassica napus HOM05D003379 ORTHO05D003862 3.8e-08 63.5 68 57.4
Cpa.g.sc38.89 Carica papaya HOM05D003379 ORTHO05D003862 3.8e-08 63.5 177 33.3
BolC1t05110H Brassica oleracea HOM05D003379 ORTHO05D003862 8.5e-08 62.4 56 62.5
SMO117G0242 Selaginella moellendorffii HOM05D002493 ORTHO05D003175 1.9e-07 61.2 360 24.2
BolC2t08454H Brassica oleracea HOM05D003379 ORTHO05D003862 5.5e-07 59.7 56 58.9
C08p31050 Brassica napus HOM05D003379 ORTHO05D003862 2.1e-06 57.8 52 61.5
ECA246G3772 Erigeron canadensis HOM05D003379 ORTHO05D003862 2.1e-06 57.8 435 25.5


User provided reference genes

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