Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G11830 Arabidopsis thaliana HOM05D008154 ORTHO05D012061 5.8e-100 367.5 175 100.0
AL6G22580 Arabidopsis lyrata HOM05D008154 ORTHO05D012061 5.8e-92 340.9 167 96.4
Carub.0006s1036 Capsella rubella HOM05D008154 ORTHO05D012061 2.1e-81 305.8 165 87.9
CARHR201330 Cardamine hirsuta HOM05D008154 ORTHO05D012061 7.7e-76 287.3 169 79.9
Thhalv10015823m.g Eutrema salsugineum HOM05D008154 ORTHO05D012061 4.7e-73 278.1 166 79.5
Sp6g31770 Schrenkiella parvula HOM05D008154 ORTHO05D012061 1.8e-72 276.2 165 77.0
A02p01230 Brassica napus HOM05D008154 ORTHO05D012061 7.4e-71 270.8 167 76.0
BraA02t05102Z Brassica rapa HOM05D008154 ORTHO05D012061 7.4e-71 270.8 167 76.0
BcaC03g13395 Brassica carinata HOM05D008154 ORTHO05D012061 9.7e-71 270.4 167 75.4
C02p05410 Brassica napus HOM05D008154 ORTHO05D012061 9.7e-71 270.4 167 75.4
BolC2t06489H Brassica oleracea HOM05D008154 ORTHO05D012061 2.8e-70 268.9 167 74.9
BcaNung02650 Brassica carinata HOM05D008154 ORTHO05D012061 1.5e-68 263.1 167 71.9
BcaB01g05451 Brassica carinata HOM05D008154 ORTHO05D012061 7.7e-60 234.2 168 66.7
Sp2g21650 Schrenkiella parvula HOM05D008154 ORTHO05D012061 8.3e-54 214.2 162 56.2
THA.LOC104799699 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 1.1e-53 213.8 163 60.1
BcaNung03981 Brassica carinata HOM05D008154 ORTHO05D012061 7.0e-53 211.1 162 58.6
THA.LOC104811241 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 9.1e-53 210.7 160 56.2
A06p36580 Brassica napus HOM05D008154 ORTHO05D012061 1.6e-52 209.9 159 57.9
BraA06t26584Z Brassica rapa HOM05D008154 ORTHO05D012061 1.6e-52 209.9 159 57.9
CARHR187350 Cardamine hirsuta HOM05D008154 ORTHO05D012061 1.6e-52 209.9 163 58.9
BcaB04g19752 Brassica carinata HOM05D008154 ORTHO05D012061 2.7e-52 209.1 157 58.0
BolC7t44720H Brassica oleracea HOM05D008154 ORTHO05D012061 2.7e-52 209.1 156 59.0
C07p41900 Brassica napus HOM05D008154 ORTHO05D012061 5.9e-52 208.0 156 58.3
BcaC04g23599 Brassica carinata HOM05D008154 ORTHO05D012061 1.3e-51 206.8 160 56.9
THA.LOC104811313 Tarenaya hassleriana HOM05D008154 ORTHO05D012557 1.1e-50 203.8 165 55.8
Thhalv10005491m.g Eutrema salsugineum HOM05D008154 ORTHO05D012557 1.2e-49 200.3 156 55.8
AT5G26090 Arabidopsis thaliana HOM05D008154 ORTHO05D012557 3.6e-49 198.7 148 55.4
AL6G38080 Arabidopsis lyrata HOM05D008154 ORTHO05D012557 1.0e-48 197.2 141 58.9
Carub.0006s2384 Capsella rubella HOM05D008154 ORTHO05D012557 1.4e-48 196.8 144 58.3
C09p06570 Brassica napus HOM05D008154 ORTHO05D012557 1.8e-48 196.4 144 59.7
BolC9t53583H Brassica oleracea HOM05D008154 ORTHO05D012557 1.8e-48 196.4 144 59.7
A09p06010 Brassica napus HOM05D008154 ORTHO05D012557 2.2e-46 189.5 138 60.1
BraA09t36243Z Brassica rapa HOM05D008154 ORTHO05D012557 2.2e-46 189.5 138 60.1
BcaNung03980 Brassica carinata HOM05D008154 ORTHO05D012061 1.5e-31 140.2 113 56.6
Aa31LG8G3050 Aethionema arabicum HOM05D008154 ORTHO05D012553 6.6e-19 98.2 163 33.1
BraA03t09861Z Brassica rapa HOM05D003166 ORTHO05D003605 5.6e-18 95.1 58 69.0
BolC3t13113H Brassica oleracea HOM05D000239 ORTHO05D000484 7.3e-18 94.7 58 69.0
BolC5t33799H Brassica oleracea HOM05D008154 ORTHO05D012553 3.6e-17 92.4 160 33.8
C05p50530 Brassica napus HOM05D008154 ORTHO05D012553 8.1e-17 91.3 160 33.8
A05p33540 Brassica napus HOM05D008154 ORTHO05D012553 3.1e-16 89.4 160 32.5
BraA05t22175Z Brassica rapa HOM05D008154 ORTHO05D012553 3.1e-16 89.4 160 32.5
CARHR090960 Cardamine hirsuta HOM05D008154 ORTHO05D012553 3.1e-16 89.4 160 32.5
BcaC05g28926 Brassica carinata HOM05D008154 ORTHO05D012553 1.2e-15 87.4 158 33.5
BcaB04g20900 Brassica carinata HOM05D008154 ORTHO05D012553 3.4e-15 85.9 160 31.9
THA.LOC104810614 Tarenaya hassleriana HOM05D008154 ORTHO05D012553 2.9e-14 82.8 130 36.9
Carub.0003s1560 Capsella rubella HOM05D008154 ORTHO05D012553 4.9e-14 82.0 160 30.0
Sp3g14190 Schrenkiella parvula HOM05D008154 ORTHO05D012553 4.9e-14 82.0 160 30.0
BcaC09g48565 Brassica carinata HOM05D008154 ORTHO05D012553 6.4e-14 81.6 160 30.6
C01p48500 Brassica napus HOM05D008154 ORTHO05D012553 6.4e-14 81.6 166 30.1
BolC1t04810H Brassica oleracea HOM05D008154 ORTHO05D012553 6.4e-14 81.6 160 30.6
Thhalv10022366m.g Eutrema salsugineum HOM05D008154 ORTHO05D012553 6.4e-14 81.6 160 30.6
AT3G15860 Arabidopsis thaliana HOM05D008154 ORTHO05D012553 8.4e-14 81.3 161 30.4
A01p38240 Brassica napus HOM05D008154 ORTHO05D012553 8.4e-14 81.3 160 30.0
BraA01t03880Z Brassica rapa HOM05D008154 ORTHO05D012553 2.4e-13 79.7 160 29.4
Aa31LG11G5040 Aethionema arabicum HOM05D008154 ORTHO05D012557 4.0e-08 62.4 163 31.3
Sp2g21640 Schrenkiella parvula HOM05D008154 ORTHO05D012557 5.8e-07 58.5 161 31.1
BcaC03g17839 Brassica carinata HOM05D008154 ORTHO05D012557 1.3e-06 57.4 142 30.3
A02p39190 Brassica napus HOM05D008154 ORTHO05D012557 1.3e-06 57.4 142 30.3
C02p58790 Brassica napus HOM05D008154 ORTHO05D012557 1.3e-06 57.4 142 30.3
BolC2t11938H Brassica oleracea HOM05D008154 ORTHO05D012557 1.7e-06 57.0 142 29.6
BraA02t08884Z Brassica rapa HOM05D008154 ORTHO05D012557 4.9e-06 55.5 130 31.5
BcaB04g19751 Brassica carinata HOM05D008154 ORTHO05D012557 6.4e-06 55.1 135 31.1


User provided reference genes

Program Settings