Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G10680 Arabidopsis thaliana HOM05D000372 ORTHO05D003436 2.7e-111 405.6 242 100.0
AL6G21200 Arabidopsis lyrata HOM05D000372 ORTHO05D003436 5.3e-83 311.6 194 87.1
AL6G21260 Arabidopsis lyrata HOM05D000372 ORTHO05D003436 1.1e-69 267.3 161 88.2
AT5G10720 Arabidopsis thaliana HOM05D000372 ORTHO05D003436 4.9e-65 251.9 161 84.5
Carub.0006s0919 Capsella rubella HOM05D000372 ORTHO05D003436 1.2e-63 247.3 161 81.4
CARHR202600 Cardamine hirsuta HOM05D000372 ORTHO05D003436 1.6e-60 236.9 166 78.9
Thhalv10012606m.g Eutrema salsugineum HOM05D000372 ORTHO05D003436 3.7e-60 235.7 161 80.7
Sp6g32740 Schrenkiella parvula HOM05D000372 ORTHO05D003436 1.4e-59 233.8 161 79.5
A10p26890 Brassica napus HOM05D000372 ORTHO05D003436 4.5e-58 228.8 161 77.0
BcaC04g19290 Brassica carinata HOM05D000372 ORTHO05D003436 2.2e-57 226.5 161 76.4
C09p66090 Brassica napus HOM05D000372 ORTHO05D003436 2.2e-57 226.5 161 76.4
BolC9t59429H Brassica oleracea HOM05D000372 ORTHO05D003436 2.2e-57 226.5 161 76.4
BraA10t44741Z Brassica rapa HOM05D000372 ORTHO05D003436 2.2e-57 226.5 161 76.4
BcaB01g05503 Brassica carinata HOM05D000372 ORTHO05D003436 2.1e-55 219.9 161 72.7
C03p05430 Brassica napus HOM05D000372 ORTHO05D003436 2.1e-55 219.9 161 72.7
BolC3t13054H Brassica oleracea HOM05D000372 ORTHO05D003436 2.1e-55 219.9 161 72.7
Sp2g06120 Schrenkiella parvula HOM05D000372 ORTHO05D003436 2.1e-55 219.9 161 76.4
Aa31LG3G16390 Aethionema arabicum HOM05D000372 ORTHO05D003436 6.1e-55 218.4 161 73.3
A03p04730 Brassica napus HOM05D000372 ORTHO05D003436 6.1e-55 218.4 161 71.4
BraA03t09813Z Brassica rapa HOM05D000372 ORTHO05D003436 6.7e-54 214.9 162 71.6
BcaC03g13326 Brassica carinata HOM05D000372 ORTHO05D003436 1.5e-53 213.8 163 74.2
BolC2t06420H Brassica oleracea HOM05D000372 ORTHO05D003436 1.5e-53 213.8 163 74.2
A02p00610 Brassica napus HOM05D000372 ORTHO05D003436 3.3e-53 212.6 163 74.2
THA.LOC104803327 Tarenaya hassleriana HOM05D000372 ORTHO05D003436 4.3e-53 212.2 195 65.1
Aa31LG3G16410 Aethionema arabicum HOM05D000372 ORTHO05D003436 7.4e-53 211.5 161 70.8
BcaB01g06273 Brassica carinata HOM05D000372 ORTHO05D003436 7.4e-53 211.5 161 69.6
C02p04600 Brassica napus HOM05D000372 ORTHO05D003436 7.4e-53 211.5 163 73.0
BcaB08g37314 Brassica carinata HOM05D000372 ORTHO05D003436 9.7e-53 211.1 161 73.3
BraA02t05044Z Brassica rapa HOM05D000372 ORTHO05D003436 1.6e-52 210.3 163 73.0
Sp2g22540 Schrenkiella parvula HOM05D000372 ORTHO05D003436 2.4e-51 206.5 163 71.8
BcaB05g21500 Brassica carinata HOM05D000372 ORTHO05D003436 2.0e-50 203.4 163 71.2
BcaB01g06275 Brassica carinata HOM05D000372 ORTHO05D003436 2.9e-49 199.5 165 70.3
A03p04720 Brassica napus HOM05D000372 ORTHO05D003436 5.1e-46 188.7 161 63.4
BraA03t09812Z Brassica rapa HOM05D000372 ORTHO05D003436 5.1e-46 188.7 161 63.4
Duzib187G1714 Durio zibethinus HOM05D000372 ORTHO05D003436 1.7e-41 173.7 165 57.6
COL.COLO4_19011 Corchorus olitorius HOM05D000372 ORTHO05D003436 2.7e-39 166.4 165 56.4
Thecc.09G009700 Theobroma cacao HOM05D000372 ORTHO05D003436 2.7e-39 166.4 165 55.8
Sed0022125 Sechium edule HOM05D000372 ORTHO05D003436 2.3e-38 163.3 165 53.3
Cpa.g.sc23.44 Carica papaya HOM05D000372 ORTHO05D003436 6.7e-38 161.8 200 48.5
Prupe.1G400900 Prunus persica HOM05D000372 ORTHO05D003436 8.8e-38 161.4 165 53.3
Cfa017850 Carpinus fangiana HOM05D000372 ORTHO05D003436 2.6e-37 159.8 165 53.9
Duzib150G0268 Durio zibethinus HOM05D000372 ORTHO05D003436 2.6e-37 159.8 165 53.3
Duzib168G1416 Durio zibethinus HOM05D000372 ORTHO05D003436 2.6e-37 159.8 165 54.5
QL02p017417 Quercus lobata HOM05D000372 ORTHO05D003436 2.6e-37 159.8 165 52.7
CARHR155340 Cardamine hirsuta HOM05D000372 ORTHO05D003436 3.3e-37 159.5 128 73.4
ClCG05G016010 Citrullus lanatus HOM05D000372 ORTHO05D003436 7.4e-37 158.3 165 52.1
Haze_18342 Corylus avellana HOM05D000372 ORTHO05D003436 7.4e-37 158.3 165 53.3
Gohir.A05G062700 Gossypium hirsutum HOM05D000372 ORTHO05D003436 7.4e-37 158.3 164 54.3
Nn8g40299 Nelumbo nucifera HOM05D000372 ORTHO05D003436 7.4e-37 158.3 161 54.0
Gohir.D05G065200 Gossypium hirsutum HOM05D000372 ORTHO05D003436 9.7e-37 157.9 164 54.3
Gorai.009G066000 Gossypium raimondii HOM05D000372 ORTHO05D003436 9.7e-37 157.9 164 54.3
CiPaw.16G070900 Carya illinoinensis HOM05D000372 ORTHO05D003436 1.3e-36 157.5 214 44.4
Gorai.009G066300 Gossypium raimondii HOM05D000372 ORTHO05D003436 3.7e-36 156.0 165 53.3
arahy.Tifrunner.gnm1.ann1.54Q5ZL Arachis hypogaea HOM05D000372 ORTHO05D003436 4.8e-36 155.6 164 53.0
CANSAT25G2139 Cannabis sativa HOM05D000372 ORTHO05D003436 4.8e-36 155.6 161 53.4
Gohir.A05G063000 Gossypium hirsutum HOM05D000372 ORTHO05D003436 4.8e-36 155.6 165 52.7
Gohir.D05G065500 Gossypium hirsutum HOM05D000372 ORTHO05D003436 4.8e-36 155.6 165 53.3
PGR044G0422 Punica granatum HOM05D000372 ORTHO05D003436 4.8e-36 155.6 166 50.0
MD08G1047400 Malus domestica HOM05D000372 ORTHO05D003436 8.2e-36 154.8 165 50.9
arahy.Tifrunner.gnm1.ann1.672M4G Arachis hypogaea HOM05D000372 ORTHO05D003436 1.1e-35 154.5 164 52.4
Sed0000787 Sechium edule HOM05D000372 ORTHO05D003436 1.1e-35 154.5 165 52.7
CsaV3_4G036290 Cucumis sativus L. HOM05D000372 ORTHO05D003436 1.4e-35 154.1 165 50.3
Eucgr.C04019 Eucalyptus grandis HOM05D000372 ORTHO05D003436 1.8e-35 153.7 165 49.7
MELO3C016937.2 Cucumis melo HOM05D000372 ORTHO05D003436 2.4e-35 153.3 165 50.3
Dinv06101 Davidia involucrata HOM05D000372 ORTHO05D003436 4.1e-35 152.5 166 52.4
Dinv19797 Davidia involucrata HOM05D000372 ORTHO05D003436 4.1e-35 152.5 167 52.7
Glyma.04G058400 Glycine max HOM05D000372 ORTHO05D003436 4.1e-35 152.5 166 50.6
MD15G1046500 Malus domestica HOM05D000372 ORTHO05D003436 4.1e-35 152.5 165 49.1
Lj7C743T9 Lonicera japonica HOM05D000372 ORTHO05D003436 9.1e-35 151.4 162 54.3
THA.LOC104819942 Tarenaya hassleriana HOM05D000372 ORTHO05D003436 9.1e-35 151.4 164 53.7
Ciclev10010162m.g Citrus clementina HOM05D000372 ORTHO05D003436 1.2e-34 151.0 214 43.9
Glyma.U003300 Glycine max HOM05D000372 ORTHO05D003436 1.6e-34 150.6 166 50.6
arahy.Tifrunner.gnm1.ann1.IKLL4G Arachis hypogaea HOM05D000372 ORTHO05D003436 2.6e-34 149.8 167 48.5
Lalb_Chr14g0375411 Lupinus albus HOM05D000372 ORTHO05D003436 3.5e-34 149.4 165 51.5
arahy.Tifrunner.gnm1.ann1.2363PW Arachis hypogaea HOM05D000372 ORTHO05D003436 5.9e-34 148.7 167 47.9
Glyma.17G220800 Glycine max HOM05D000372 ORTHO05D003436 7.7e-34 148.3 167 50.9
Lsat_1_v5_gn_3_25440 Lactuca sativa HOM05D000372 ORTHO05D003436 7.7e-34 148.3 164 50.0
Rhsim07G0169300 Rhododendron simsii HOM05D000372 ORTHO05D003436 7.7e-34 148.3 165 50.3
Atru.chr7.2608 Acer truncatum HOM05D000372 ORTHO05D003436 1.0e-33 147.9 199 47.2
Ca_15798_v3 Cicer arietinum L. HOM05D000372 ORTHO05D003436 1.3e-33 147.5 167 50.3
Hma1.2p1_0102F.1_g049740 Hydrangea macrophylla HOM05D000372 ORTHO05D003436 1.3e-33 147.5 160 52.5
TAR383G1081 Trochodendron aralioides HOM05D000372 ORTHO05D003436 1.7e-33 147.1 196 44.4
Aqoxy7G03181 Aquilegia oxysepala HOM05D000372 ORTHO05D003436 2.2e-33 146.7 157 51.0
ECA240G4325 Erigeron canadensis HOM05D000372 ORTHO05D003436 2.2e-33 146.7 168 47.6
HanXRQChr06g0174111 Helianthus annuus HOM05D000372 ORTHO05D003436 2.2e-33 146.7 165 49.7
Potri.018G011400 Populus trichocarpa HOM05D000372 ORTHO05D003436 2.2e-33 146.7 165 50.9
Manes.03G005600 Manihot esculenta HOM05D000372 ORTHO05D003436 3.8e-33 146.0 164 48.2
Phvul.001G043600 Phaseolus vulgaris HOM05D000372 ORTHO05D003436 5.0e-33 145.6 216 43.1
VMungo0647G1491 Vigna mungo HOM05D000372 ORTHO05D003436 5.0e-33 145.6 216 43.1
Lj1g0015187 Lotus japonicus HOM05D000372 ORTHO05D003436 8.5e-33 144.8 162 49.4
Lj5g0022261 Lotus japonicus HOM05D000372 ORTHO05D003436 8.5e-33 144.8 168 52.4
Cc08_g06200 Coffea canephora HOM05D000372 ORTHO05D003436 1.1e-32 144.4 169 50.9
Manes.16G133700 Manihot esculenta HOM05D000372 ORTHO05D003436 1.1e-32 144.4 164 49.4
TWI32G0796 Tripterygium wilfordii HOM05D000372 ORTHO05D003436 1.1e-32 144.4 165 49.1
TWI63G0489 Tripterygium wilfordii HOM05D000372 ORTHO05D003436 1.5e-32 144.1 165 50.9
CSS0035630 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 1.9e-32 143.7 165 50.3
CSS0035919 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 1.9e-32 143.7 165 50.3
Phvul.009G084900 Phaseolus vulgaris HOM05D000372 ORTHO05D003436 1.9e-32 143.7 166 48.2
Sabra06G0210300 Salix brachista HOM05D000372 ORTHO05D003436 1.9e-32 143.7 165 49.1
Ca_13081_v3 Cicer arietinum L. HOM05D000372 ORTHO05D003436 2.5e-32 143.3 169 50.9
VMungo1309G2648 Vigna mungo HOM05D000372 ORTHO05D003436 4.2e-32 142.5 164 48.8
RcHm_v2.0_Chr6g0304671 Rosa chinensis HOM05D000372 ORTHO05D003436 7.2e-32 141.7 167 51.5
FAN27G2462 Fragaria x ananassa HOM05D000372 ORTHO05D003436 9.4e-32 141.4 169 51.5
Nitab4.5_0006884g0010 Nicotiana tabacum HOM05D000372 ORTHO05D003436 9.4e-32 141.4 171 51.5
Oeu008769.1 Olea europaea HOM05D000372 ORTHO05D003436 2.1e-31 140.2 166 49.4
CSS0024843 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 2.7e-31 139.8 165 47.9
Migut.E01430 Erythranthe guttata HOM05D000372 ORTHO05D003436 2.7e-31 139.8 165 48.5
Medtr1g013360 Medicago truncatula HOM05D000372 ORTHO05D003436 2.7e-31 139.8 172 50.0
Lsat_1_v5_gn_3_116581 Lactuca sativa HOM05D000372 ORTHO05D003436 4.7e-31 139.0 161 49.7
Psat5g033760 Pisum sativum HOM05D000372 ORTHO05D003436 4.7e-31 139.0 167 47.3
Potri.006G270500 Populus trichocarpa HOM05D000372 ORTHO05D003436 4.7e-31 139.0 214 41.6
FAN20G1896 Fragaria x ananassa HOM05D000372 ORTHO05D003436 6.1e-31 138.7 169 50.9
FvH4_2g37120 Fragaria vesca HOM05D000372 ORTHO05D003436 1.0e-30 137.9 169 50.9
Psat6g023640 Pisum sativum HOM05D000372 ORTHO05D003436 1.0e-30 137.9 169 49.7
Psat7g193560 Pisum sativum HOM05D000372 ORTHO05D003436 1.0e-30 137.9 169 49.7
Nitab4.5_0000502g0160 Nicotiana tabacum HOM05D000372 ORTHO05D003436 1.4e-30 137.5 171 49.7
TPR.G21426 Trifolium pratense HOM05D000372 ORTHO05D003436 1.8e-30 137.1 168 47.0
Lsat_1_v5_gn_5_62200 Lactuca sativa HOM05D000372 ORTHO05D003436 2.3e-30 136.7 191 44.0
SalBow4G3322 Salvia bowleyana HOM05D000372 ORTHO05D003436 2.3e-30 136.7 166 48.8
FAN15G3394 Fragaria x ananassa HOM05D000372 ORTHO05D003436 4.0e-30 136.0 169 49.7
ECA246G0477 Erigeron canadensis HOM05D000372 ORTHO05D003436 5.2e-30 135.6 165 46.7
Sabra18G0012300 Salix brachista HOM05D000372 ORTHO05D003436 5.2e-30 135.6 165 46.7
Sc23g0006190 Simmondsia chinensis HOM05D000372 ORTHO05D003436 5.2e-30 135.6 166 47.6
Oeu023248.1 Olea europaea HOM05D000372 ORTHO05D003436 8.8e-30 134.8 166 51.2
Peaxi162Scf00288g01010 Petunia axillaris HOM05D000372 ORTHO05D003436 1.1e-29 134.4 204 44.1
vmacro05111 Vaccinium macrocarpon HOM05D000372 ORTHO05D003436 1.1e-29 134.4 165 45.5
MBI14_g24282_MAGBIO Magnolia biondii HOM05D000372 ORTHO05D003436 4.4e-29 132.5 159 46.5
SEGI_17810 Sequoiadendron giganteum HOM05D000372 ORTHO05D003436 4.4e-29 132.5 164 45.7
ATR0580G441 Amborella trichopoda HOM05D000372 ORTHO05D003436 7.5e-29 131.7 199 41.2
Medtr3g105590 Medicago truncatula HOM05D000372 ORTHO05D003436 7.5e-29 131.7 168 45.8
Solyc08g068960.3 Solanum lycopersicum HOM05D000372 ORTHO05D003436 2.2e-28 130.2 207 45.9
Sopen08g022620 Solanum pennellii HOM05D000372 ORTHO05D003436 2.2e-28 130.2 207 45.9
CSS0018460 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 3.7e-28 129.4 161 46.0
PGSC0003DMG400029542 Solanum tuberosum HOM05D000372 ORTHO05D003436 3.7e-28 129.4 207 45.9
CAN.G808.7 Capsicum annuum HOM05D000372 ORTHO05D003436 6.3e-28 128.6 208 45.2
Sc09g0010830 Simmondsia chinensis HOM05D000372 ORTHO05D003436 6.3e-28 128.6 164 47.0
Hund25587 Selenicereus undatus HOM05D000372 ORTHO05D003436 3.1e-27 126.3 166 47.6
HanXRQChr03g0082521 Helianthus annuus HOM05D000372 ORTHO05D003436 4.1e-27 125.9 152 46.1
TPR.G38926 Trifolium pratense HOM05D000372 ORTHO05D003436 9.1e-27 124.8 152 48.7
SalBow8G1746 Salvia bowleyana HOM05D000372 ORTHO05D003436 1.2e-26 124.4 166 45.2
SalBow8G4869 Salvia bowleyana HOM05D000372 ORTHO05D003436 1.2e-26 124.4 166 45.2
Rhsim07G0169400 Rhododendron simsii HOM05D000372 ORTHO05D003436 2.0e-26 123.6 156 46.8
DCAR_003039 Daucus carota HOM05D000372 ORTHO05D003436 1.0e-25 121.3 165 44.2
PSO063G4267 Papaver somniferum HOM05D000372 ORTHO05D003436 1.0e-25 121.3 167 42.5
PSO782G1259 Papaver somniferum HOM05D000372 ORTHO05D003436 1.0e-25 121.3 167 42.5
Migut.A00416 Erythranthe guttata HOM05D000372 ORTHO05D003436 5.0e-25 119.0 173 45.7
TPR.G38882 Trifolium pratense HOM05D000372 ORTHO05D003436 5.0e-25 119.0 150 46.7
HPP92_011627 Vanilla planifolia HOM05D000372 ORTHO05D003436 8.5e-25 118.2 165 45.5
CSS0002412 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 2.5e-24 116.7 176 45.5
EL10Ac2g02429 Beta vulgaris HOM05D000372 ORTHO05D003436 7.2e-24 115.2 162 48.8
SGA_v2.0_scaffold121G33025 Striga asiatica HOM05D000372 ORTHO05D003436 9.4e-24 114.8 153 49.0
DCAR_003038 Daucus carota HOM05D000372 ORTHO05D003436 1.6e-23 114.0 199 39.2
CSS0030725 Camellia sinensis var. sinensis HOM05D000372 ORTHO05D003436 3.6e-23 112.8 160 44.4
AUR62037701 Chenopodium quinoa HOM05D000372 ORTHO05D003436 1.8e-22 110.5 162 47.5
Ah.10g025030 Amaranthus hybridus HOM05D000372 ORTHO05D003436 7.5e-21 105.1 163 43.6
Aa31sc15G100 Aethionema arabicum HOM05D000372 ORTHO05D003436 4.8e-20 102.4 119 51.3
HanXRQChr06g0174121 Helianthus annuus HOM05D000372 ORTHO05D003436 7.0e-19 98.6 134 45.5
BcaB01g05505 Brassica carinata HOM05D000372 ORTHO05D003436 1.1e-16 91.3 70 65.7
Zm00001eb389570 Zea mays HOM05D000372 ORTHO05D003436 9.4e-16 88.2 165 36.4
Medtr1g014670 Medicago truncatula HOM05D000372 ORTHO05D003436 2.1e-15 87.0 126 46.0
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 6.1e-15 85.5 66 65.2
Os06g0654300 Oryza sativa ssp. japonica HOM05D000372 ORTHO05D003436 6.1e-15 85.5 199 33.2
Zm00001eb274910 Zea mays HOM05D000372 ORTHO05D003436 1.0e-14 84.7 158 36.7
Glyma.18G115250 Glycine max HOM05D000372 ORTHO05D003436 1.4e-14 84.3 74 58.1
Psat6g023560 Pisum sativum HOM05D000372 ORTHO05D003436 1.5e-13 80.9 126 46.0
AT5G10660 Arabidopsis thaliana HOM05D008799 ORTHO05D010975 1.3e-12 77.8 144 54.2
Migut.E00913 Erythranthe guttata HOM05D000372 ORTHO05D003436 2.2e-12 77.0 163 34.4
AUR62020299 Chenopodium quinoa HOM05D000372 ORTHO05D003436 5.4e-11 72.4 101 47.5
Actinidia23121 Actinidia chinensis HOM05D000372 ORTHO05D003436 3.5e-10 69.7 164 33.5
AL6G21190 Arabidopsis lyrata HOM05D008799 ORTHO05D010975 1.9e-08 63.9 70 84.3
Mapoly0139s0010 Marchantia polymorpha HOM05D000372 ORTHO05D003436 9.5e-08 61.6 103 41.7
Sc23g0007090 Simmondsia chinensis HOM05D000372 ORTHO05D003436 2.1e-07 60.5 82 42.7
AL3G44190 Arabidopsis lyrata HOM05D000372 ORTHO05D003436 6.1e-07 58.9 36 80.6
AL6G39880 Arabidopsis lyrata HOM05D000372 ORTHO05D003436 6.1e-07 58.9 36 80.6
PSO170G2710 Papaver somniferum HOM05D000372 ORTHO05D003436 6.1e-07 58.9 116 38.8
AL1G49220 Arabidopsis lyrata HOM05D000372 ORTHO05D003436 3.0e-06 56.6 36 77.8
AL2G19500 Arabidopsis lyrata HOM05D000372 ORTHO05D003436 6.8e-06 55.5 36 75.0


User provided reference genes

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