Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G10660 Arabidopsis thaliana HOM05D008799 ORTHO05D010975 7.1e-182 641.0 453 100.0
AL6G21190 Arabidopsis lyrata HOM05D008799 ORTHO05D010975 2.9e-119 433.0 393 84.2
CARHR202650 Cardamine hirsuta HOM05D008799 ORTHO05D010975 5.2e-92 342.4 388 63.1
Sp6g32790 Schrenkiella parvula HOM05D008799 ORTHO05D010975 2.9e-90 336.7 386 67.4
Carub.0006s0914 Capsella rubella HOM05D008799 ORTHO05D010975 4.1e-89 332.8 388 71.6
BcaB05g21498 Brassica carinata HOM05D008799 ORTHO05D010975 5.6e-70 269.2 387 54.5
BcaB01g06270 Brassica carinata HOM05D008799 ORTHO05D010975 9.5e-70 268.5 413 56.2
BraA03t09809Z Brassica rapa HOM05D008799 ORTHO05D010975 4.9e-66 256.1 414 53.1
A02p00590 Brassica napus HOM05D008799 ORTHO05D010975 1.4e-65 254.6 388 58.0
BcaC03g13324 Brassica carinata HOM05D008799 ORTHO05D010975 1.2e-64 251.5 389 57.8
A03p04690 Brassica napus HOM05D008799 ORTHO05D010975 7.8e-64 248.8 423 56.5
C09p66120 Brassica napus HOM05D008799 ORTHO05D010975 2.6e-59 233.8 239 60.3
BolC9t59432H Brassica oleracea HOM05D008799 ORTHO05D010975 2.6e-59 233.8 239 60.3
BcaC04g19292 Brassica carinata HOM05D008799 ORTHO05D010975 7.6e-59 232.3 242 59.5
C03p05400 Brassica napus HOM05D008799 ORTHO05D010975 2.1e-56 224.2 414 50.0
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 2.7e-56 223.8 414 50.0
BraA02t05042Z Brassica rapa HOM05D008799 ORTHO05D010975 2.3e-55 220.7 393 54.2
BcaB08g37100 Brassica carinata HOM05D008799 ORTHO05D010975 3.9e-55 219.9 243 58.8
A10p26930 Brassica napus HOM05D008799 ORTHO05D010975 5.1e-55 219.5 387 48.3
C02p04580 Brassica napus HOM05D008799 ORTHO05D010975 1.5e-54 218.0 389 54.2
Aa31LG3G16460 Aethionema arabicum HOM05D008799 ORTHO05D010975 1.9e-54 217.6 431 51.3
BraA10t44744Z Brassica rapa HOM05D008799 ORTHO05D010975 4.3e-54 216.5 390 45.9
CARHR188570 Cardamine hirsuta HOM05D008799 ORTHO05D010975 2.3e-47 194.1 428 47.4
BcaB01g05508 Brassica carinata HOM05D008799 ORTHO05D010975 1.3e-45 188.3 414 48.1
THA.LOC104803324 Tarenaya hassleriana HOM05D008799 ORTHO05D010975 6.2e-45 186.0 393 41.0
BolC2t06418H Brassica oleracea HOM05D008799 ORTHO05D010975 4.5e-43 179.9 389 50.4
AL6G36554 Arabidopsis lyrata HOM05D008799 ORTHO05D010975 1.7e-42 177.9 432 47.9
AT5G24880 Arabidopsis thaliana HOM05D008799 ORTHO05D010975 4.9e-42 176.4 432 46.8
Sp2g22570 Schrenkiella parvula HOM05D008799 ORTHO05D010975 1.4e-41 174.9 422 44.8
THA.LOC104814972 Tarenaya hassleriana HOM05D008799 ORTHO05D010975 1.6e-40 171.4 396 46.2
Thhalv10004239m.g Eutrema salsugineum HOM05D008799 ORTHO05D010975 2.7e-40 170.6 369 45.5
A06p35660 Brassica napus HOM05D008799 ORTHO05D010975 3.3e-38 163.7 414 43.2
BraA06t26491Z Brassica rapa HOM05D008799 ORTHO05D010975 2.1e-37 161.0 416 45.0
C07p42890 Brassica napus HOM05D008799 ORTHO05D010975 1.4e-36 158.3 260 47.7
BolC7t44817H Brassica oleracea HOM05D008799 ORTHO05D010975 1.4e-36 158.3 260 47.7
BcaNung05897 Brassica carinata HOM05D008799 ORTHO05D010975 2.7e-32 144.1 421 43.2
Carub.0006s2273 Capsella rubella HOM05D008799 ORTHO05D010975 4.1e-28 130.2 419 46.3
Aa31LG11G4080 Aethionema arabicum HOM05D008799 ORTHO05D010975 3.1e-20 104.0 277 37.5
BolC2t12057H Brassica oleracea HOM05D008799 ORTHO05D010975 5.3e-12 76.6 324 35.2
AT5G10680 Arabidopsis thaliana HOM05D000372 ORTHO05D003436 2.5e-09 67.8 144 54.2
BraA02t08970Z Brassica rapa HOM05D008799 ORTHO05D010975 2.0e-06 58.2 269 32.0


User provided reference genes

Program Settings