Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G10040 Arabidopsis thaliana HOM05D008955 ORTHO05D011140 9.9e-40 166.4 88 100.0
AL6G20490 Arabidopsis lyrata HOM05D008955 ORTHO05D011140 9.0e-25 116.7 67 89.6
CARHR203270 Cardamine hirsuta HOM05D008955 ORTHO05D011140 3.2e-14 81.6 70 61.4
CARHR203260 Cardamine hirsuta HOM05D008955 ORTHO05D011140 9.4e-14 80.1 71 63.4
BcaB08g37146 Brassica carinata HOM05D008955 ORTHO05D011140 4.6e-13 77.8 70 62.9
Thhalv10015184m.g Eutrema salsugineum HOM05D008955 ORTHO05D011140 1.1e-11 73.2 71 60.6
A10p27450 Brassica napus HOM05D008955 ORTHO05D011140 2.0e-11 72.4 75 56.0
Thhalv10005237m.g Eutrema salsugineum HOM05D008955 ORTHO05D011140 9.7e-11 70.1 69 56.5
BcaC04g19348 Brassica carinata HOM05D008955 ORTHO05D011140 1.3e-10 69.7 71 57.7
A02p43760 Brassica napus HOM05D008955 ORTHO05D011140 1.3e-10 69.7 69 55.1
C09p67510 Brassica napus HOM05D008955 ORTHO05D011140 1.3e-10 69.7 71 57.7
BolC9t59511H Brassica oleracea HOM05D008955 ORTHO05D011140 1.3e-10 69.7 71 57.7
BraA10t44797Z Brassica rapa HOM05D008955 ORTHO05D011140 2.2e-10 68.9 71 56.3
BcaB02g09884 Brassica carinata HOM05D008955 ORTHO05D011140 2.8e-10 68.6 69 55.1
Carub.0006s0850 Capsella rubella HOM05D008955 ORTHO05D011140 2.8e-10 68.6 70 60.0
C02p63900 Brassica napus HOM05D008955 ORTHO05D011140 3.7e-10 68.2 69 53.6
Sp6g33360 Schrenkiella parvula HOM05D008955 ORTHO05D011140 3.7e-10 68.2 63 60.3
SpUn0247_0030 Schrenkiella parvula HOM05D008955 ORTHO05D011140 3.7e-10 68.2 63 60.3
BraA02t09300Z Brassica rapa HOM05D008955 ORTHO05D011140 4.8e-10 67.8 69 53.6
Sp2g28300 Schrenkiella parvula HOM05D008955 ORTHO05D011140 4.8e-10 67.8 68 54.4
BolC3t18348H Brassica oleracea HOM05D008955 ORTHO05D011140 8.2e-10 67.0 69 52.2
BolC2t12458H Brassica oleracea HOM05D008955 ORTHO05D011140 1.4e-09 66.2 69 52.2
BraA06t26134Z Brassica rapa HOM05D008955 ORTHO05D011140 1.4e-09 66.2 69 53.6
BcaC01g02755 Brassica carinata HOM05D008955 ORTHO05D011140 2.4e-09 65.5 69 50.7
C03p60890 Brassica napus HOM05D008955 ORTHO05D011140 2.4e-09 65.5 69 50.7
A09p08950 Brassica napus HOM05D008955 ORTHO05D011140 2.6e-08 62.0 70 45.7
C09p10390 Brassica napus HOM05D008955 ORTHO05D011140 2.6e-08 62.0 70 45.7
BolC9t53941H Brassica oleracea HOM05D008955 ORTHO05D011140 2.6e-08 62.0 70 45.7
Aa31LG1G16760 Aethionema arabicum HOM05D008955 ORTHO05D011140 7.7e-08 60.5 70 51.4
Aa31LG3G17090 Aethionema arabicum HOM05D008955 ORTHO05D011140 2.9e-07 58.5 71 54.9
CARHR279130 Cardamine hirsuta HOM05D008955 ORTHO05D011140 3.2e-06 55.1 69 46.4
AL8G42740 Arabidopsis lyrata HOM05D008955 ORTHO05D011140 4.2e-06 54.7 69 46.4
BcaB04g20006 Brassica carinata HOM05D008955 ORTHO05D011140 4.2e-06 54.7 71 42.3
AT5G65207 Arabidopsis thaliana HOM05D008955 ORTHO05D011140 9.4e-06 53.5 70 45.7


User provided reference genes

Program Settings