Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G08055 Arabidopsis thaliana HOM05D008408 ORTHO05D009173 6.2e-44 180.3 82 100.0
Carub.0008s0682 Capsella rubella HOM05D008408 ORTHO05D009173 3.6e-36 154.5 82 85.4
AT5G08315 Arabidopsis thaliana HOM05D008408 ORTHO05D009173 2.4e-35 151.8 83 83.1
AT1G33607 Arabidopsis thaliana HOM05D008408 ORTHO05D009173 5.8e-34 147.1 82 84.1
AL6G18730 Arabidopsis lyrata HOM05D008408 ORTHO05D009173 3.2e-32 141.4 82 79.3
BcaB08g37265 Brassica carinata HOM05D008408 ORTHO05D009173 2.1e-28 128.6 82 72.0
BraA10t44883Z Brassica rapa HOM05D008408 ORTHO05D009173 6.2e-28 127.1 82 69.5
C09p68620 Brassica napus HOM05D008408 ORTHO05D009173 8.1e-28 126.7 82 69.5
A10p28360 Brassica napus HOM05D008408 ORTHO05D009173 1.4e-27 125.9 82 68.3
BolC9t59606H Brassica oleracea HOM05D008408 ORTHO05D009173 1.4e-27 125.9 82 69.5
Carub.0008s0683 Capsella rubella HOM05D008408 ORTHO05D009173 3.8e-25 117.9 82 69.5
Thhalv10001718m.g Eutrema salsugineum HOM05D008408 ORTHO05D009173 1.9e-24 115.5 80 62.5
THA.LOC104807176 Tarenaya hassleriana HOM05D008408 ORTHO05D009173 3.5e-23 111.3 83 62.7
THA.LOC104807177 Tarenaya hassleriana HOM05D008408 ORTHO05D009173 7.9e-23 110.2 83 63.9
C02p03510 Brassica napus HOM05D008408 ORTHO05D009173 1.0e-22 109.8 82 67.1
BolC2t06310H Brassica oleracea HOM05D008408 ORTHO05D009173 1.0e-22 109.8 82 67.1
Sp4g25680 Schrenkiella parvula HOM05D008408 ORTHO05D009173 2.3e-22 108.6 81 61.7
BraA02t04950Z Brassica rapa HOM05D008408 ORTHO05D009173 1.3e-20 102.8 82 63.4
C02p03520 Brassica napus HOM05D008408 ORTHO05D009173 3.7e-20 101.3 82 62.2
BolC2t06311H Brassica oleracea HOM05D008408 ORTHO05D009173 3.7e-20 101.3 82 62.2
THA.LOC109116535 Tarenaya hassleriana HOM05D008408 ORTHO05D009173 6.2e-20 100.5 83 57.8
THA.LOC109116531 Tarenaya hassleriana HOM05D008408 ORTHO05D009173 1.1e-19 99.8 81 58.0
THA.LOC109116863 Tarenaya hassleriana HOM05D008408 ORTHO05D009173 1.1e-19 99.8 82 56.1
THA.LOC109116906 Tarenaya hassleriana HOM05D008408 ORTHO05D009173 4.0e-19 97.8 83 56.6
AL6G30800 Arabidopsis lyrata HOM05D008408 ORTHO05D009173 2.6e-18 95.1 81 54.3
AT5G19315 Arabidopsis thaliana HOM05D008408 ORTHO05D009173 3.4e-18 94.7 82 57.3
CARHR138690 Cardamine hirsuta HOM05D008408 ORTHO05D009173 7.6e-18 93.6 80 56.2
Carub.0006s1765 Capsella rubella HOM05D008408 ORTHO05D009173 1.0e-17 93.2 82 54.9
BcaC03g13221 Brassica carinata HOM05D008408 ORTHO05D009173 1.3e-17 92.8 86 58.1
BNapus_Darmor_BZH_scaffold_38p02640 Brassica napus HOM05D008408 ORTHO05D009173 6.5e-17 90.5 81 51.9
CARHR193650 Cardamine hirsuta HOM05D008408 ORTHO05D009173 6.5e-17 90.5 79 51.9
A02p05470 Brassica napus HOM05D008408 ORTHO05D009173 1.9e-16 89.0 81 51.9
BraA02t05498Z Brassica rapa HOM05D008408 ORTHO05D009173 1.9e-16 89.0 81 51.9
BcaC03g13220 Brassica carinata HOM05D008408 ORTHO05D009173 9.3e-16 86.7 64 68.8
Aa31LG11G10380 Aethionema arabicum HOM05D008408 ORTHO05D009173 2.1e-15 85.5 82 51.2
Aa31LG11G10370 Aethionema arabicum HOM05D008408 ORTHO05D009173 2.1e-12 75.5 82 45.1
BcaNung00027 Brassica carinata HOM05D008408 ORTHO05D009173 4.5e-10 67.8 91 40.7
A01p10130 Brassica napus HOM05D008408 ORTHO05D009173 1.3e-09 66.2 83 44.6
BraA01t00959Z Brassica rapa HOM05D008408 ORTHO05D009173 1.3e-09 66.2 83 44.6
CARHR225690 Cardamine hirsuta HOM05D008408 ORTHO05D009173 1.7e-09 65.9 76 42.1
Actinidia29960 Actinidia chinensis HOM05D008282 ORTHO05D009173 8.4e-09 63.5 88 43.2
Thhalv10026696m.g Eutrema salsugineum HOM05D008408 ORTHO05D009173 1.1e-08 63.2 91 38.5
AL7G35410 Arabidopsis lyrata HOM05D008408 ORTHO05D009173 2.5e-08 62.0 74 41.9
Thecc.01G234600 Theobroma cacao HOM05D008282 ORTHO05D009173 9.3e-08 60.1 88 46.6
COL.COLO4_29927 Corchorus olitorius HOM05D008282 ORTHO05D009173 1.2e-07 59.7 88 40.9
PSO063G3641 Papaver somniferum HOM05D008282 ORTHO05D009173 1.6e-07 59.3 85 38.8
BcaNung02676 Brassica carinata HOM05D029055 ORTHO05D009173 2.1e-07 58.9 84 38.1
C07p50000 Brassica napus HOM05D029055 ORTHO05D009173 2.1e-07 58.9 84 38.1
Sp6g27730 Schrenkiella parvula HOM05D008408 ORTHO05D016591 2.1e-07 58.9 52 46.2
Thecc.01G205100 Theobroma cacao HOM05D008282 ORTHO05D009173 2.1e-07 58.9 88 38.6
AT4G18823 Arabidopsis thaliana HOM05D008408 ORTHO05D009173 6.1e-07 57.4 77 40.3
Aa31LG11G10360 Aethionema arabicum HOM05D008408 ORTHO05D009173 7.9e-07 57.0 80 38.8
Carub.0006s1465 Capsella rubella HOM05D008408 ORTHO05D016591 1.0e-06 56.6 80 37.5
CSS0031071 Camellia sinensis var. sinensis HOM05D008282 ORTHO05D009173 3.0e-06 55.1 64 43.8
MD15G1119700 Malus domestica HOM05D008282 ORTHO05D009173 3.0e-06 55.1 82 40.2
C02p08350 Brassica napus HOM05D008408 ORTHO05D016591 3.9e-06 54.7 81 37.0
Duzib138G1943 Durio zibethinus HOM05D008282 ORTHO05D009173 6.7e-06 53.9 88 42.0


User provided reference genes

Program Settings