Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 7.9e-55 216.9 108 100.0
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 4.3e-53 211.1 108 97.2
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 5.6e-53 210.7 108 97.2
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 2.1e-52 208.8 108 95.4
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 2.8e-52 208.4 108 95.4
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 4.8e-52 207.6 108 95.4
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 6.2e-52 207.2 108 94.4
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 1.4e-51 206.1 108 94.4
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 2.4e-51 205.3 107 93.5
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 2.4e-51 205.3 107 93.5
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 2.4e-51 205.3 107 93.5
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 6.9e-51 203.8 107 92.5
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 1.5e-50 202.6 108 93.5
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 7.6e-50 200.3 108 92.6
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 7.6e-50 200.3 108 90.7
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 2.9e-49 198.4 102 97.1
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 6.2e-44 180.6 105 82.9
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 3.1e-43 178.3 105 81.0
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 4.0e-43 177.9 108 78.7
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 1.2e-42 176.4 105 81.0
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 2.6e-42 175.3 105 80.0
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 2.6e-42 175.3 100 82.0
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 4.5e-42 174.5 107 76.6
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.0e-41 173.3 108 76.9
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 1.0e-41 173.3 108 76.9
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 1.0e-41 173.3 108 76.9
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 2.2e-41 172.2 108 75.9
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 6.5e-41 170.6 105 80.0
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 6.5e-41 170.6 105 79.0
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 8.4e-41 170.2 105 81.0
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 8.4e-41 170.2 108 77.8
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 8.4e-41 170.2 108 75.9
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 1.4e-40 169.5 100 79.0
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 4.2e-40 167.9 107 75.7
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 5.5e-40 167.5 102 80.4
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 5.5e-40 167.5 108 72.2
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 7.1e-40 167.2 103 74.8
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 9.3e-40 166.8 101 79.2
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 9.3e-40 166.8 106 77.4
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 9.3e-40 166.8 106 77.4
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.6e-39 166.0 108 74.1
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 2.1e-39 165.6 100 77.0
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 2.1e-39 165.6 97 81.4
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 3.5e-39 164.9 103 75.7
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 4.6e-39 164.5 107 76.6
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 6.0e-39 164.1 105 75.2
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 2.3e-38 162.2 97 75.3
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 3.0e-38 161.8 106 76.4
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 3.9e-38 161.4 101 76.2
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 5.1e-38 161.0 103 74.8
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 5.1e-38 161.0 100 79.0
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 5.1e-38 161.0 100 79.0
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 5.1e-38 161.0 100 79.0
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 8.7e-38 160.2 105 76.2
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 1.1e-37 159.8 97 76.3
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 1.1e-37 159.8 105 73.3
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 1.5e-37 159.5 97 76.3
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 1.9e-37 159.1 104 72.1
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 2.5e-37 158.7 101 68.3
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.5e-37 158.7 92 80.4
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 3.3e-37 158.3 97 75.3
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 3.3e-37 158.3 104 71.2
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 3.3e-37 158.3 102 77.5
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 4.3e-37 157.9 100 71.0
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 1.6e-36 156.0 101 69.3
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 1.6e-36 156.0 100 77.0
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 1.6e-36 156.0 101 69.3
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 1.6e-36 156.0 104 70.2
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 2.2e-36 155.6 90 81.1
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 2.2e-36 155.6 104 71.2
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 2.2e-36 155.6 103 70.9
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 3.7e-36 154.8 100 72.0
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 4.8e-36 154.5 100 76.0
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 4.8e-36 154.5 100 76.0
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 8.2e-36 153.7 99 73.7
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 1.1e-35 153.3 105 67.6
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 1.1e-35 153.3 105 67.6
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 1.1e-35 153.3 106 67.0
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 1.4e-35 152.9 101 71.3
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 3.1e-35 151.8 102 78.4
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 3.1e-35 151.8 98 72.4
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 5.3e-35 151.0 92 78.3
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 1.2e-34 149.8 96 69.8
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 2.0e-34 149.1 100 76.0
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 2.0e-34 149.1 99 69.7
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 4.5e-34 147.9 101 73.3
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 5.9e-34 147.5 101 75.2
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 1.0e-33 146.7 135 57.0
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 3.2e-32 141.7 151 52.3
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 2.3e-30 135.6 79 84.8
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 3.0e-30 135.2 87 73.6
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 1.1e-29 133.3 100 64.0
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 9.7e-29 130.2 81 77.8
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 9.7e-29 130.2 86 70.9
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 3.7e-28 128.3 80 73.8
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 6.3e-28 127.5 86 72.1
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 2.4e-27 125.6 87 70.1
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 2.4e-27 125.6 91 63.7
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 6.9e-27 124.0 102 62.7
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 6.9e-27 124.0 90 63.3
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 2.9e-25 118.6 88 63.6
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 6.5e-25 117.5 58 96.6
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 1.2e-23 113.2 86 65.1
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 4.7e-23 111.3 55 96.4
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 4.7e-23 111.3 85 63.5
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 7.9e-23 110.5 81 70.4
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.8e-22 109.4 77 72.7
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 8.8e-22 107.1 86 54.7
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 5.7e-21 104.4 95 54.7
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 2.8e-20 102.1 70 68.6
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 1.8e-19 99.4 56 85.7
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 4.5e-18 94.7 74 60.8
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 3.9e-14 81.6 56 71.4
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 5.7e-13 77.8 53 67.9
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.1e-08 63.5 53 60.4
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 2.1e-07 59.3 53 58.5


User provided reference genes

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